RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 OR11H7Q8NGC8 314 aa11.28□□□□□ -0.6
HDAC4-213ENST00000496347 IGF2BP2-AS1Q96M15 143 aa11.28□□□□□ -0.6
HDAC4-213ENST00000496347 SLC50A1Q9BRV3 221 aa11.28□□□□□ -0.6
HDAC4-213ENST00000496347 GPN1Q9HCN4 374 aaPredicted RBP11.28□□□□□ -0.6
HDAC4-213ENST00000496347 IGHV4-4A0A075B6R2 117 aa11.27□□□□□ -0.61
HDAC4-213ENST00000496347 DEFB131BA0A096LNP1 70 aa11.27□□□□□ -0.61
HDAC4-213ENST00000496347 UBE2L5PA0A1B0GUS4 154 aa11.27□□□□□ -0.61
HDAC4-213ENST00000496347 A6NHS1 94 aa11.27□□□□□ -0.61
HDAC4-213ENST00000496347 MRPS12O15235 138 aaKnown RBP11.27□□□□□ -0.61
HDAC4-213ENST00000496347 BPIFA4PQ86YQ2 179 aa11.27□□□□□ -0.61
HDAC4-213ENST00000496347 APLNQ9ULZ1 77 aa11.27□□□□□ -0.61
HDAC4-213ENST00000496347 WDR83OSQ9Y284 106 aa11.27□□□□□ -0.61
HDAC4-213ENST00000496347 BOLA2-SMG1P6H3BVE0 249 aa11.26□□□□□ -0.61
HDAC4-213ENST00000496347 S100A11P31949 105 aa11.26□□□□□ -0.61
HDAC4-213ENST00000496347 EMP1P54849 157 aa11.26□□□□□ -0.61
HDAC4-213ENST00000496347 PRR20EP86478 221 aa11.26□□□□□ -0.61
HDAC4-213ENST00000496347 PRR20CP86479 221 aa11.26□□□□□ -0.61
HDAC4-213ENST00000496347 PRR20DP86480 221 aa11.26□□□□□ -0.61
HDAC4-213ENST00000496347 PRR20BP86481 221 aa11.26□□□□□ -0.61
HDAC4-213ENST00000496347 PRR20AP86496 221 aa11.26□□□□□ -0.61
HDAC4-213ENST00000496347 RAB32Q13637 225 aa11.26□□□□□ -0.61
HDAC4-213ENST00000496347 C10orf113Q5VZT2 155 aa11.26□□□□□ -0.61
HDAC4-213ENST00000496347 IGFL4Q6B9Z1 124 aa11.26□□□□□ -0.61
HDAC4-213ENST00000496347 Q6ZRG5 221 aa11.26□□□□□ -0.61
HDAC4-213ENST00000496347 NRARPQ7Z6K4 114 aa11.26□□□□□ -0.61
HDAC4-213ENST00000496347 C1orf158Q8N1D5 194 aa11.26□□□□□ -0.61
HDAC4-213ENST00000496347 RPP25LQ8N5L8 163 aaKnown RBP11.26□□□□□ -0.61
HDAC4-213ENST00000496347 LRRC20Q8TCA0 184 aa11.26□□□□□ -0.61
HDAC4-213ENST00000496347 PFDN5Q99471 154 aa11.26□□□□□ -0.61
HDAC4-213ENST00000496347 TMEM208Q9BTX3 173 aa11.26□□□□□ -0.61
HDAC4-213ENST00000496347 DKK2Q9UBU2 259 aa11.26□□□□□ -0.61
HDAC4-213ENST00000496347 LOC102723971A0A1B0GUV8 181 aa11.25□□□□□ -0.61
HDAC4-213ENST00000496347 IGSF23A1L1A6 192 aa11.25□□□□□ -0.61
HDAC4-213ENST00000496347 FAM24AA6NFZ4 105 aa11.25□□□□□ -0.61
HDAC4-213ENST00000496347 PRAF2O60831 178 aa11.25□□□□□ -0.61
HDAC4-213ENST00000496347 B2MP61769 119 aa11.25□□□□□ -0.61
HDAC4-213ENST00000496347 HIST1H1AQ02539 215 aaPredicted RBP11.25□□□□□ -0.61
HDAC4-213ENST00000496347 PSG3Q16557 428 aa11.25□□□□□ -0.61
HDAC4-213ENST00000496347 SPINK13Q1W4C9 94 aa11.25□□□□□ -0.61
HDAC4-213ENST00000496347 RRN3P1Q2M238 152 aa11.25□□□□□ -0.61
HDAC4-213ENST00000496347 ZNF767PQ75MW2 155 aa11.25□□□□□ -0.61
HDAC4-213ENST00000496347 TMEM252Q8N6L7 170 aa11.25□□□□□ -0.61
HDAC4-213ENST00000496347 OR8A1Q8NGG7 326 aa11.25□□□□□ -0.61
HDAC4-213ENST00000496347 OR1L4Q8NGR5 311 aa11.25□□□□□ -0.61
HDAC4-213ENST00000496347 TMEM37Q8WXS4 190 aa11.25□□□□□ -0.61
HDAC4-213ENST00000496347 ZNF331Q9NQX6 463 aaPredicted RBP11.25□□□□□ -0.61
HDAC4-213ENST00000496347 M0R2Z0 102 aa11.24□□□□□ -0.61
HDAC4-213ENST00000496347 MPDU1O75352 247 aa11.24□□□□□ -0.61
HDAC4-213ENST00000496347 IGLC2P0DOY2 106 aa11.24□□□□□ -0.61
HDAC4-213ENST00000496347 BAXQ07812 192 aa11.24□□□□□ -0.61
HDAC4-213ENST00000496347 OPCMLQ14982 345 aa11.24□□□□□ -0.61
HDAC4-213ENST00000496347 OXA1LQ15070 435 aa11.24□□□□□ -0.61
HDAC4-213ENST00000496347 FAM222AQ5U5X8 452 aa11.24□□□□□ -0.61
HDAC4-213ENST00000496347 CHAC2Q8WUX2 184 aa11.24□□□□□ -0.61
HDAC4-213ENST00000496347 PXMP4Q9Y6I8 212 aa11.24□□□□□ -0.61
HDAC4-213ENST00000496347 CRXO43186 299 aaPredicted RBP11.23□□□□□ -0.61
HDAC4-213ENST00000496347 RPL29P47914 159 aaKnown RBP11.23□□□□□ -0.61
HDAC4-213ENST00000496347 GUK1Q16774 197 aa11.23□□□□□ -0.61
HDAC4-213ENST00000496347 ATP6V1FQ16864 119 aa11.23□□□□□ -0.61
HDAC4-213ENST00000496347 MIC13Q5XKP0 118 aa11.23□□□□□ -0.61
HDAC4-213ENST00000496347 BAP18Q8IXM2 172 aa11.23□□□□□ -0.61
HDAC4-213ENST00000496347 TMEM256Q8N2U0 113 aa11.23□□□□□ -0.61
HDAC4-213ENST00000496347 RPUSD4Q96CM3 377 aaKnown RBP11.23□□□□□ -0.61
HDAC4-213ENST00000496347 FAM210BQ96KR6 192 aa11.23□□□□□ -0.61
HDAC4-213ENST00000496347 NIPSNAP3BQ9BS92 247 aa11.23□□□□□ -0.61
HDAC4-213ENST00000496347 NDUFAF3Q9BU61 184 aa11.23□□□□□ -0.61
HDAC4-213ENST00000496347 NMES1Q9C002 83 aa11.23□□□□□ -0.61
HDAC4-213ENST00000496347 DNAJC4Q9NNZ3 241 aa11.23□□□□□ -0.61
HDAC4-213ENST00000496347 SLC39A9Q9NUM3 307 aa11.23□□□□□ -0.61
HDAC4-213ENST00000496347 YTHDF2Q9Y5A9 579 aaKnown RBP11.23□□□□□ -0.61
HDAC4-213ENST00000496347 FGF7P21781 194 aa11.22□□□□□ -0.61
HDAC4-213ENST00000496347 TSPOP30536 169 aa11.22□□□□□ -0.61
HDAC4-213ENST00000496347 MORN5Q5VZ52 161 aa11.22□□□□□ -0.61
HDAC4-213ENST00000496347 DNAH10Q8IVF4 4471 aa11.22□□□□□ -0.61
HDAC4-213ENST00000496347 PPP1R14DQ9NXH3 145 aa11.22□□□□□ -0.61
HDAC4-213ENST00000496347 SLC17A3O00476 420 aa11.21□□□□□ -0.61
HDAC4-213ENST00000496347 ZNF253O75346 499 aa11.21□□□□□ -0.61
HDAC4-213ENST00000496347 DEFA1P59665 94 aa11.21□□□□□ -0.61
HDAC4-213ENST00000496347 DEFA3P59666 94 aa11.21□□□□□ -0.61
HDAC4-213ENST00000496347 RHOBP62745 196 aa11.21□□□□□ -0.61
HDAC4-213ENST00000496347 IFITM3Q01628 133 aa11.21□□□□□ -0.61
HDAC4-213ENST00000496347 NPCDR1Q9BY65 106 aa11.21□□□□□ -0.61
HDAC4-213ENST00000496347 KCNIP2Q9NS61 270 aa11.21□□□□□ -0.61
HDAC4-213ENST00000496347 HECTD4Q9Y4D8 3996 aa11.21□□□□□ -0.62
HDAC4-213ENST00000496347 E5RGE8 158 aa11.2□□□□□ -0.62
HDAC4-213ENST00000496347 INMT-MINDY4F8WBC2 141 aa11.2□□□□□ -0.62
HDAC4-213ENST00000496347 P0DMU3 169 aa11.2□□□□□ -0.62
HDAC4-213ENST00000496347 FAM231AP0DMU4 169 aa11.2□□□□□ -0.62
HDAC4-213ENST00000496347 FAM231CP0DMU5 169 aa11.2□□□□□ -0.62
HDAC4-213ENST00000496347 CDKN1BP46527 198 aa11.2□□□□□ -0.62
HDAC4-213ENST00000496347 CYCSP99999 105 aaKnown RBP11.2□□□□□ -0.62
HDAC4-213ENST00000496347 MARVELD1Q9BSK0 173 aa11.2□□□□□ -0.62
HDAC4-213ENST00000496347 SLC25A31Q9H0C2 315 aa11.2□□□□□ -0.62
HDAC4-213ENST00000496347 TRAV12-2A0A075B6T6 113 aa11.19□□□□□ -0.62
HDAC4-213ENST00000496347 LYRM9A8MSI8 78 aa11.19□□□□□ -0.62
HDAC4-213ENST00000496347 H3BQ15 152 aa11.19□□□□□ -0.62
HDAC4-213ENST00000496347 RLN2P04090 185 aa11.19□□□□□ -0.62
HDAC4-213ENST00000496347 PET100P0DJ07 73 aa11.19□□□□□ -0.62
HDAC4-213ENST00000496347 TAS2R60P59551 318 aa11.19□□□□□ -0.62
HDAC4-213ENST00000496347 OR10J6PQ8NGY7 276 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms