RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 TSPOP30536 169 aa13.02□□□□□ -0.33
CLCNKA-207ENST00000495784 TAS2R30P59541 319 aa13.02□□□□□ -0.33
CLCNKA-207ENST00000495784 PSG3Q16557 428 aa13.02□□□□□ -0.33
CLCNKA-207ENST00000495784 SOHLH1Q5JUK2 328 aa13.02□□□□□ -0.33
CLCNKA-207ENST00000495784 ZNF546Q86UE3 836 aa13.02□□□□□ -0.33
CLCNKA-207ENST00000495784 C15orf53Q8NAA6 179 aa13.02□□□□□ -0.33
CLCNKA-207ENST00000495784 LINC01587Q99440 93 aa13.02□□□□□ -0.33
CLCNKA-207ENST00000495784 ARV1Q9H2C2 271 aa13.02□□□□□ -0.33
CLCNKA-207ENST00000495784 GOSR2O14653 212 aa13.01□□□□□ -0.33
CLCNKA-207ENST00000495784 PXDC1Q5TGL8 231 aa13.01□□□□□ -0.33
CLCNKA-207ENST00000495784 Q6ZR54 194 aa13.01□□□□□ -0.33
CLCNKA-207ENST00000495784 TMEM256Q8N2U0 113 aa13.01□□□□□ -0.33
CLCNKA-207ENST00000495784 ZBTB8BQ8NAP8 495 aaPredicted RBP13.01□□□□□ -0.33
CLCNKA-207ENST00000495784 AZU1P20160 251 aa13□□□□□ -0.33
CLCNKA-207ENST00000495784 BTCP35070 178 aa13□□□□□ -0.33
CLCNKA-207ENST00000495784 PATE2Q6UY27 113 aa13□□□□□ -0.33
CLCNKA-207ENST00000495784 MITD1Q8WV92 249 aa13□□□□□ -0.33
CLCNKA-207ENST00000495784 RPUSD4Q96CM3 377 aaKnown RBP13□□□□□ -0.33
CLCNKA-207ENST00000495784 ATG101Q9BSB4 218 aa13□□□□□ -0.33
CLCNKA-207ENST00000495784 RCL1Q9Y2P8 373 aaKnown RBP13□□□□□ -0.33
CLCNKA-207ENST00000495784 PKHD1P08F94 4074 aa12.99□□□□□ -0.33
CLCNKA-207ENST00000495784 F5H768 121 aa12.99□□□□□ -0.33
CLCNKA-207ENST00000495784 HTN1P15515 57 aa12.99□□□□□ -0.33
CLCNKA-207ENST00000495784 CXCL2P19875 107 aa12.99□□□□□ -0.33
CLCNKA-207ENST00000495784 TAS2R60P59551 318 aa12.99□□□□□ -0.33
CLCNKA-207ENST00000495784 LCN15Q6UWW0 184 aa12.99□□□□□ -0.33
CLCNKA-207ENST00000495784 LINC00305Q7Z4B0 112 aa12.99□□□□□ -0.33
CLCNKA-207ENST00000495784 SDHCQ99643 169 aaPredicted RBP12.99□□□□□ -0.33
CLCNKA-207ENST00000495784 GGACTQ9BVM4 153 aa12.99□□□□□ -0.33
CLCNKA-207ENST00000495784 PCLOQ9Y6V0 5065 aa12.99□□□□□ -0.33
CLCNKA-207ENST00000495784 AGPAT2O15120 278 aa12.98□□□□□ -0.33
CLCNKA-207ENST00000495784 COX7A2P2O60397 106 aa12.98□□□□□ -0.33
CLCNKA-207ENST00000495784 MED14OSP0DP75 135 aa12.98□□□□□ -0.33
CLCNKA-207ENST00000495784 PRB4P10163 310 aaPredicted RBP12.98□□□□□ -0.33
CLCNKA-207ENST00000495784 IL7P13232 177 aa12.98□□□□□ -0.33
CLCNKA-207ENST00000495784 FAM3BP58499 235 aaPredicted RBP12.98□□□□□ -0.33
CLCNKA-207ENST00000495784 ZNF846Q147U1 533 aa12.98□□□□□ -0.33
CLCNKA-207ENST00000495784 FCN2Q15485 313 aa12.98□□□□□ -0.33
CLCNKA-207ENST00000495784 CNPY1Q3B7I2 92 aa12.98□□□□□ -0.33
CLCNKA-207ENST00000495784 PLAC8L1A1L4L8 177 aa12.97□□□□□ -0.33
CLCNKA-207ENST00000495784 C7orf66A4D0T2 115 aa12.97□□□□□ -0.33
CLCNKA-207ENST00000495784 L7N2F9 121 aa12.97□□□□□ -0.33
CLCNKA-207ENST00000495784 MRPS12O15235 138 aaKnown RBP12.97□□□□□ -0.33
CLCNKA-207ENST00000495784 MBPP02686 304 aaPredicted RBP12.97□□□□□ -0.33
CLCNKA-207ENST00000495784 ATP5G1P05496 136 aa12.97□□□□□ -0.33
CLCNKA-207ENST00000495784 SNRPCP09234 159 aaKnown RBP12.97□□□□□ -0.33
CLCNKA-207ENST00000495784 CDKN1BP46527 198 aa12.97□□□□□ -0.33
CLCNKA-207ENST00000495784 ATP5G3P48201 142 aa12.97□□□□□ -0.33
CLCNKA-207ENST00000495784 VAMP2P63027 116 aa12.97□□□□□ -0.33
CLCNKA-207ENST00000495784 ARL16Q0P5N6 197 aa12.97□□□□□ -0.33
CLCNKA-207ENST00000495784 C1orf134Q5TEV5 83 aa12.97□□□□□ -0.33
CLCNKA-207ENST00000495784 BPIFA4PQ86YQ2 179 aa12.97□□□□□ -0.33
CLCNKA-207ENST00000495784 C16orf74Q96GX8 76 aa12.97□□□□□ -0.33
CLCNKA-207ENST00000495784 SLC50A1Q9BRV3 221 aa12.97□□□□□ -0.33
CLCNKA-207ENST00000495784 ZNF331Q9NQX6 463 aaPredicted RBP12.97□□□□□ -0.33
CLCNKA-207ENST00000495784 NUDT3O95989 172 aa12.96□□□□□ -0.33
CLCNKA-207ENST00000495784 C20orf85Q9H1P6 137 aa12.96□□□□□ -0.33
CLCNKA-207ENST00000495784 DNAH11Q96DT5 4516 aa12.96□□□□□ -0.33
CLCNKA-207ENST00000495784 DYNC1H1Q14204 4646 aaKnown RBP12.96□□□□□ -0.34
CLCNKA-207ENST00000495784 CBY3A6NI87 242 aa12.95□□□□□ -0.34
CLCNKA-207ENST00000495784 FAM25EA8MYX2 175 aa12.95□□□□□ -0.34
CLCNKA-207ENST00000495784 CCSO14618 274 aa12.95□□□□□ -0.34
CLCNKA-207ENST00000495784 BCAP31P51572 246 aa12.95□□□□□ -0.34
CLCNKA-207ENST00000495784 RAB31Q13636 194 aa12.95□□□□□ -0.34
CLCNKA-207ENST00000495784 C10orf113Q5VZT2 155 aa12.95□□□□□ -0.34
CLCNKA-207ENST00000495784 OR10J6PQ8NGY7 276 aa12.95□□□□□ -0.34
CLCNKA-207ENST00000495784 MGST2Q99735 147 aa12.95□□□□□ -0.34
CLCNKA-207ENST00000495784 LSM5Q9Y4Y9 91 aaKnown RBP12.95□□□□□ -0.34
CLCNKA-207ENST00000495784 TIMM8BQ9Y5J9 83 aaPredicted RBP12.95□□□□□ -0.34
CLCNKA-207ENST00000495784 H7BYZ3 331 aa12.94□□□□□ -0.34
CLCNKA-207ENST00000495784 CAV2P51636 162 aa12.94□□□□□ -0.34
CLCNKA-207ENST00000495784 ZNF493Q6ZR52 646 aa12.94□□□□□ -0.34
CLCNKA-207ENST00000495784 TMEM37Q8WXS4 190 aa12.94□□□□□ -0.34
CLCNKA-207ENST00000495784 H3BTX0 84 aa12.93□□□□□ -0.34
CLCNKA-207ENST00000495784 CAMLGP49069 296 aa12.93□□□□□ -0.34
CLCNKA-207ENST00000495784 OPCMLQ14982 345 aa12.93□□□□□ -0.34
CLCNKA-207ENST00000495784 Q6ZRG5 221 aa12.93□□□□□ -0.34
CLCNKA-207ENST00000495784 TMEM263Q8WUH6 116 aaKnown RBP12.93□□□□□ -0.34
CLCNKA-207ENST00000495784 C20orf144Q9BQM9 153 aa12.93□□□□□ -0.34
CLCNKA-207ENST00000495784 NOP10Q9NPE3 64 aaKnown RBP12.93□□□□□ -0.34
CLCNKA-207ENST00000495784 PXMP4Q9Y6I8 212 aa12.93□□□□□ -0.34
CLCNKA-207ENST00000495784 NACAE9PAV3 2078 aa12.93□□□□□ -0.34
CLCNKA-207ENST00000495784 PKD1P98161 4303 aa12.92□□□□□ -0.34
CLCNKA-207ENST00000495784 C5orf51A6NDU8 294 aa12.92□□□□□ -0.34
CLCNKA-207ENST00000495784 SLC17A3O00476 420 aa12.92□□□□□ -0.34
CLCNKA-207ENST00000495784 LYRM1O43325 122 aa12.92□□□□□ -0.34
CLCNKA-207ENST00000495784 CST7O76096 145 aa12.92□□□□□ -0.34
CLCNKA-207ENST00000495784 CCL18P55774 89 aa12.92□□□□□ -0.34
CLCNKA-207ENST00000495784 MORN5Q5VZ52 161 aa12.92□□□□□ -0.34
CLCNKA-207ENST00000495784 RNASE8Q8TDE3 154 aaKnown RBP12.92□□□□□ -0.34
CLCNKA-207ENST00000495784 DNAJC4Q9NNZ3 241 aa12.92□□□□□ -0.34
CLCNKA-207ENST00000495784 TRAV6A0A075B6T7 132 aa12.91□□□□□ -0.34
CLCNKA-207ENST00000495784 PRAC2D3DTV9 90 aa12.91□□□□□ -0.34
CLCNKA-207ENST00000495784 PLA2G10O15496 165 aa12.91□□□□□ -0.34
CLCNKA-207ENST00000495784 IGLC2P0DOY2 106 aa12.91□□□□□ -0.34
CLCNKA-207ENST00000495784 NRARPQ7Z6K4 114 aa12.91□□□□□ -0.34
CLCNKA-207ENST00000495784 CCDC28AQ8IWP9 274 aa12.91□□□□□ -0.34
CLCNKA-207ENST00000495784 PARD6GQ9BYG4 376 aaPredicted RBP12.91□□□□□ -0.34
CLCNKA-207ENST00000495784 UQCC1Q9NVA1 299 aa12.91□□□□□ -0.34
CLCNKA-207ENST00000495784 H3BQ15 152 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms