RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 HBE1P02100 147 aa5.14□□□□□ -1.59
VPS52-221ENST00000495755 VAMP2P63027 116 aa5.14□□□□□ -1.59
VPS52-221ENST00000495755 ASAH1Q13510 395 aa5.14□□□□□ -1.59
VPS52-221ENST00000495755 OXA1LQ15070 435 aa5.14□□□□□ -1.59
VPS52-221ENST00000495755 PSG3Q16557 428 aa5.14□□□□□ -1.59
VPS52-221ENST00000495755 VWC2Q2TAL6 325 aa5.14□□□□□ -1.59
VPS52-221ENST00000495755 FAM222AQ5U5X8 452 aa5.14□□□□□ -1.59
VPS52-221ENST00000495755 LINC00305Q7Z4B0 112 aa5.14□□□□□ -1.59
VPS52-221ENST00000495755 ZNF738Q8NE65 137 aa5.14□□□□□ -1.59
VPS52-221ENST00000495755 OR11H7Q8NGC8 314 aa5.14□□□□□ -1.59
VPS52-221ENST00000495755 PLA2G2EQ9NZK7 142 aa5.14□□□□□ -1.59
VPS52-221ENST00000495755 RNF24Q9Y225 148 aa5.14□□□□□ -1.59
VPS52-221ENST00000495755 WDR83OSQ9Y284 106 aa5.14□□□□□ -1.59
VPS52-221ENST00000495755 LSM5Q9Y4Y9 91 aaKnown RBP5.14□□□□□ -1.59
VPS52-221ENST00000495755 TEX48A0A1B0GUV7 120 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 A6NHS1 94 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 BOLA2-SMG1P6H3BVE0 249 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 M0R2Z0 102 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 COX7A2P2O60397 106 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 PRM2P04554 102 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 CXCL2P19875 107 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 CAMLGP49069 296 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 SULT1A1P50225 295 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 BCAP31P51572 246 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 CAV2P51636 162 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 RAB31Q13636 194 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 SPINK13Q1W4C9 94 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 RRN3P1Q2M238 152 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 MORN5Q5VZ52 161 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 MZT2BQ6NZ67 158 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 NRARPQ7Z6K4 114 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 TMEM252Q8N6L7 170 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 OR8A1Q8NGG7 326 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 CHAC2Q8WUX2 184 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 S100ZQ8WXG8 99 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 FAM210BQ96KR6 192 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 NIPSNAP3BQ9BS92 247 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 NDUFAF3Q9BU61 184 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 DNAJC4Q9NNZ3 241 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 ZNF331Q9NQX6 463 aaPredicted RBP5.13□□□□□ -1.59
VPS52-221ENST00000495755 LYRM2Q9NU23 88 aaPredicted RBP5.13□□□□□ -1.59
VPS52-221ENST00000495755 UQCC1Q9NVA1 299 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 YTHDF2Q9Y5A9 579 aaKnown RBP5.13□□□□□ -1.59
VPS52-221ENST00000495755 DNAH11Q96DT5 4516 aa5.13□□□□□ -1.59
VPS52-221ENST00000495755 TRAV12-2A0A075B6T6 113 aa5.12□□□□□ -1.59
VPS52-221ENST00000495755 IGSF23A1L1A6 192 aa5.12□□□□□ -1.59
VPS52-221ENST00000495755 ZNF705GA8MUZ8 300 aaPredicted RBP5.12□□□□□ -1.59
VPS52-221ENST00000495755 H3BQ15 152 aa5.12□□□□□ -1.59
VPS52-221ENST00000495755 UPK1BO75841 260 aa5.12□□□□□ -1.59
VPS52-221ENST00000495755 INSP01308 110 aa5.12□□□□□ -1.59
VPS52-221ENST00000495755 SNRPCP09234 159 aaKnown RBP5.12□□□□□ -1.59
VPS52-221ENST00000495755 IGLC2P0DOY2 106 aa5.12□□□□□ -1.59
VPS52-221ENST00000495755 PVALBP20472 110 aaPredicted RBP5.12□□□□□ -1.59
VPS52-221ENST00000495755 TSPOP30536 169 aa5.12□□□□□ -1.59
VPS52-221ENST00000495755 S100A11P31949 105 aa5.12□□□□□ -1.59
VPS52-221ENST00000495755 RPL29P47914 159 aaKnown RBP5.12□□□□□ -1.59
VPS52-221ENST00000495755 B2MP61769 119 aa5.12□□□□□ -1.59
VPS52-221ENST00000495755 IFITM3Q01628 133 aa5.12□□□□□ -1.59
VPS52-221ENST00000495755 HIST1H1AQ02539 215 aaPredicted RBP5.12□□□□□ -1.59
VPS52-221ENST00000495755 RAB32Q13637 225 aa5.12□□□□□ -1.59
VPS52-221ENST00000495755 OPCMLQ14982 345 aa5.12□□□□□ -1.59
VPS52-221ENST00000495755 C10orf113Q5VZT2 155 aa5.12□□□□□ -1.59
VPS52-221ENST00000495755 MIC13Q5XKP0 118 aa5.12□□□□□ -1.59
VPS52-221ENST00000495755 LCN15Q6UWW0 184 aa5.12□□□□□ -1.59
VPS52-221ENST00000495755 Q6ZRG5 221 aa5.12□□□□□ -1.59
VPS52-221ENST00000495755 BPIFA4PQ86YQ2 179 aa5.12□□□□□ -1.59
VPS52-221ENST00000495755 BAP18Q8IXM2 172 aa5.12□□□□□ -1.59
VPS52-221ENST00000495755 POM121L12Q8N7R1 296 aa5.12□□□□□ -1.59
VPS52-221ENST00000495755 LRRC20Q8TCA0 184 aa5.12□□□□□ -1.59
VPS52-221ENST00000495755 RPUSD4Q96CM3 377 aaKnown RBP5.12□□□□□ -1.59
VPS52-221ENST00000495755 SAT2Q96F10 170 aaPredicted RBP5.12□□□□□ -1.59
VPS52-221ENST00000495755 TMEM208Q9BTX3 173 aa5.12□□□□□ -1.59
VPS52-221ENST00000495755 PKHD1P08F94 4074 aa5.12□□□□□ -1.59
VPS52-221ENST00000495755 TRAV5A0A0B4J249 113 aa5.11□□□□□ -1.59
VPS52-221ENST00000495755 PLAC8L1A1L4L8 177 aa5.11□□□□□ -1.59
VPS52-221ENST00000495755 LYRM9A8MSI8 78 aa5.11□□□□□ -1.59
VPS52-221ENST00000495755 PRAC2D3DTV9 90 aa5.11□□□□□ -1.59
VPS52-221ENST00000495755 H3BTX0 84 aa5.11□□□□□ -1.59
VPS52-221ENST00000495755 SLC17A3O00476 420 aa5.11□□□□□ -1.59
VPS52-221ENST00000495755 P0DMU3 169 aa5.11□□□□□ -1.59
VPS52-221ENST00000495755 FAM231AP0DMU4 169 aa5.11□□□□□ -1.59
VPS52-221ENST00000495755 FAM231CP0DMU5 169 aa5.11□□□□□ -1.59
VPS52-221ENST00000495755 AZU1P20160 251 aa5.11□□□□□ -1.59
VPS52-221ENST00000495755 S100A10P60903 97 aa5.11□□□□□ -1.59
VPS52-221ENST00000495755 RHOBP62745 196 aa5.11□□□□□ -1.59
VPS52-221ENST00000495755 HBG1P69891 147 aa5.11□□□□□ -1.59
VPS52-221ENST00000495755 HBG2P69892 147 aa5.11□□□□□ -1.59
VPS52-221ENST00000495755 GUK1Q16774 197 aa5.11□□□□□ -1.59
VPS52-221ENST00000495755 ATP6V1FQ16864 119 aa5.11□□□□□ -1.59
VPS52-221ENST00000495755 STX12Q86Y82 276 aa5.11□□□□□ -1.59
VPS52-221ENST00000495755 TMEM256Q8N2U0 113 aa5.11□□□□□ -1.59
VPS52-221ENST00000495755 OR1L4Q8NGR5 311 aa5.11□□□□□ -1.59
VPS52-221ENST00000495755 SLC50A1Q9BRV3 221 aa5.11□□□□□ -1.59
VPS52-221ENST00000495755 SLC39A9Q9NUM3 307 aa5.11□□□□□ -1.59
VPS52-221ENST00000495755 UBE2L5PA0A1B0GUS4 154 aa5.1□□□□□ -1.59
VPS52-221ENST00000495755 SIX6O95475 246 aa5.1□□□□□ -1.59
VPS52-221ENST00000495755 PRB4P10163 310 aaPredicted RBP5.1□□□□□ -1.59
VPS52-221ENST00000495755 HTN3P15516 51 aa5.1□□□□□ -1.59
VPS52-221ENST00000495755 CDKN1BP46527 198 aa5.1□□□□□ -1.59
VPS52-221ENST00000495755 TAS2R60P59551 318 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms