RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 TMEM252Q8N6L7 170 aa4.74□□□□□ -1.65
VIM-207ENST00000495528 INO80EQ8NBZ0 244 aaPredicted RBP4.74□□□□□ -1.65
VIM-207ENST00000495528 PINX1Q96BK5 328 aaKnown RBP4.74□□□□□ -1.65
VIM-207ENST00000495528 BSCL2Q96G97 398 aaPredicted RBP4.74□□□□□ -1.65
VIM-207ENST00000495528 SLC25A31Q9H0C2 315 aa4.74□□□□□ -1.65
VIM-207ENST00000495528 SIGLEC8Q9NYZ4 499 aa4.74□□□□□ -1.65
VIM-207ENST00000495528 PEF1Q9UBV8 284 aaKnown RBP4.74□□□□□ -1.65
VIM-207ENST00000495528 F11RQ9Y624 299 aaKnown RBP4.74□□□□□ -1.65
VIM-207ENST00000495528 S4R3C0 116 aa4.74□□□□□ -1.65
VIM-207ENST00000495528 HMSDA8MTL9 139 aa4.73□□□□□ -1.65
VIM-207ENST00000495528 INS-IGF2F8WCM5 200 aa4.73□□□□□ -1.65
VIM-207ENST00000495528 H3BUA1 57 aa4.73□□□□□ -1.65
VIM-207ENST00000495528 ARPC5O15511 151 aa4.73□□□□□ -1.65
VIM-207ENST00000495528 CYB5BO43169 146 aa4.73□□□□□ -1.65
VIM-207ENST00000495528 TSC22D2O75157 780 aa4.73□□□□□ -1.65
VIM-207ENST00000495528 LY6G6CO95867 125 aa4.73□□□□□ -1.65
VIM-207ENST00000495528 IGHV3-23P01764 117 aa4.73□□□□□ -1.65
VIM-207ENST00000495528 CD7P09564 240 aa4.73□□□□□ -1.65
VIM-207ENST00000495528 HIST1H1BP16401 226 aaKnown RBP4.73□□□□□ -1.65
VIM-207ENST00000495528 CXCL2P19875 107 aa4.73□□□□□ -1.65
VIM-207ENST00000495528 EIF2B2P49770 351 aaKnown RBP4.73□□□□□ -1.65
VIM-207ENST00000495528 NKX2-5P52952 324 aaPredicted RBP4.73□□□□□ -1.65
VIM-207ENST00000495528 ATP5IP56385 69 aaPredicted RBP4.73□□□□□ -1.65
VIM-207ENST00000495528 RHOGP84095 191 aa4.73□□□□□ -1.65
VIM-207ENST00000495528 EWSR1Q01844 656 aaKnown RBP eCLIP4.73□□□□□ -1.65
VIM-207ENST00000495528 ATP5G2Q06055 141 aa4.73□□□□□ -1.65
VIM-207ENST00000495528 BSXQ3C1V8 233 aa4.73□□□□□ -1.65
VIM-207ENST00000495528 LGALSLQ3ZCW2 172 aaPredicted RBP4.73□□□□□ -1.65
VIM-207ENST00000495528 ZNF343Q6P1L6 599 aa4.73□□□□□ -1.65
VIM-207ENST00000495528 TMEM14EPQ6UXP3 125 aa4.73□□□□□ -1.65
VIM-207ENST00000495528 ACOT7LQ6ZUV0 252 aa4.73□□□□□ -1.65
VIM-207ENST00000495528 OR10P1Q8NGE3 313 aa4.73□□□□□ -1.65
VIM-207ENST00000495528 OR1L6Q8NGR2 347 aa4.73□□□□□ -1.65
VIM-207ENST00000495528 OR1P1Q8NH06 330 aa4.73□□□□□ -1.65
VIM-207ENST00000495528 GATAD1Q8WUU5 269 aa4.73□□□□□ -1.65
VIM-207ENST00000495528 HYLS1Q96M11 299 aa4.73□□□□□ -1.65
VIM-207ENST00000495528 SMIM3Q9BZL3 60 aa4.73□□□□□ -1.65
VIM-207ENST00000495528 MFFQ9GZY8 342 aa4.73□□□□□ -1.65
VIM-207ENST00000495528 WFDC10AQ9H1F0 79 aa4.73□□□□□ -1.65
VIM-207ENST00000495528 LYRM2Q9NU23 88 aaPredicted RBP4.73□□□□□ -1.65
VIM-207ENST00000495528 TNFSF18Q9UNG2 199 aa4.73□□□□□ -1.65
VIM-207ENST00000495528 IGLV11-55A0A075B6I3 123 aa4.72□□□□□ -1.65
VIM-207ENST00000495528 BOLA2-SMG1P6H3BVE0 249 aa4.72□□□□□ -1.65
VIM-207ENST00000495528 I3L2K1 104 aa4.72□□□□□ -1.65
VIM-207ENST00000495528 MT-CO2P00403 227 aa4.72□□□□□ -1.65
VIM-207ENST00000495528 S100A11P31949 105 aa4.72□□□□□ -1.65
VIM-207ENST00000495528 GPX4P36969 197 aaPredicted RBP4.72□□□□□ -1.65
VIM-207ENST00000495528 OPRK1P41145 380 aa4.72□□□□□ -1.65
VIM-207ENST00000495528 SULT1A1P50225 295 aa4.72□□□□□ -1.65
VIM-207ENST00000495528 RPEL1Q2QD12 228 aa4.72□□□□□ -1.65
VIM-207ENST00000495528 TMUB2Q71RG4 321 aa4.72□□□□□ -1.65
VIM-207ENST00000495528 OR1S2Q8NGQ3 325 aa4.72□□□□□ -1.65
VIM-207ENST00000495528 OR2K2Q8NGT1 345 aa4.72□□□□□ -1.65
VIM-207ENST00000495528 RNASEH2CQ8TDP1 164 aaKnown RBP4.72□□□□□ -1.65
VIM-207ENST00000495528 ACY3Q96HD9 319 aa4.72□□□□□ -1.65
VIM-207ENST00000495528 FNDC4Q9H6D8 234 aaPredicted RBP4.72□□□□□ -1.65
VIM-207ENST00000495528 SRD5A3Q9H8P0 318 aa4.72□□□□□ -1.65
VIM-207ENST00000495528 THYN1Q9P016 225 aa4.72□□□□□ -1.65
VIM-207ENST00000495528 HSPB11Q9Y547 144 aa4.72□□□□□ -1.65
VIM-207ENST00000495528 PCLOQ9Y6V0 5065 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 TRBV9A0A0B4J1U6 114 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 A0A0D9SG52 128 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 SMCO3A2RU48 225 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 RNF222A6NCQ9 220 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 OR11H12B2RN74 326 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 H7C423 109 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 K7EIM0 57 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 CORTO00230 105 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 HBG1P69891 147 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 HBG2P69892 147 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 SLC38A11Q08AI6 406 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 GAMTQ14353 236 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 CLINT1Q14677 625 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 ATP6V1FQ16864 119 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 DEFB114Q30KQ6 69 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 C15orf32Q32M92 178 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 PVRIGQ6DKI7 326 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 LAMTOR1Q6IAA8 161 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 ETFRF1Q6IPR1 90 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 CLEC19AQ6UXS0 136 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 STX12Q86Y82 276 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 KCNRGQ8N5I3 272 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 UBAC2Q8NBM4 344 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 NECAP1Q8NC96 275 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 OR5C1Q8NGR4 320 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 USMG5Q96IX5 58 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 C2orf48Q96LS8 159 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 AQP10Q96PS8 301 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 WFDC1Q9HC57 220 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 NPVFQ9HCQ7 196 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 MRPL36Q9P0J6 103 aaKnown RBP4.71□□□□□ -1.66
VIM-207ENST00000495528 SELENOKQ9Y6D0 94 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 DNAH10Q8IVF4 4471 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 FRAS1Q86XX4 4008 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 KMT2AQ03164 3969 aa4.71□□□□□ -1.66
VIM-207ENST00000495528 MFSD2BA6NFX1 497 aa4.7□□□□□ -1.66
VIM-207ENST00000495528 FAM223BA6NKX1 122 aa4.7□□□□□ -1.66
VIM-207ENST00000495528 PRSS46E5RG02 174 aa4.7□□□□□ -1.66
VIM-207ENST00000495528 IFNA5P01569 189 aa4.7□□□□□ -1.66
VIM-207ENST00000495528 RND2P52198 227 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms