RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 DNAH1Q9P2D7 4330 aa16.37■□□□□ 0.21
SNIP1-203ENST00000493916 FGF7P21781 194 aa16.37■□□□□ 0.21
SNIP1-203ENST00000493916 B2MP61769 119 aa16.37■□□□□ 0.21
SNIP1-203ENST00000493916 NHLH2Q02577 135 aa16.37■□□□□ 0.21
SNIP1-203ENST00000493916 MORN5Q5VZ52 161 aa16.37■□□□□ 0.21
SNIP1-203ENST00000493916 IGFL4Q6B9Z1 124 aa16.37■□□□□ 0.21
SNIP1-203ENST00000493916 ZNF705AQ6ZN79 300 aaPredicted RBP16.37■□□□□ 0.21
SNIP1-203ENST00000493916 BPIFA4PQ86YQ2 179 aa16.37■□□□□ 0.21
SNIP1-203ENST00000493916 PFDN5Q99471 154 aa16.37■□□□□ 0.21
SNIP1-203ENST00000493916 HRH4Q9H3N8 390 aa16.37■□□□□ 0.21
SNIP1-203ENST00000493916 SLC39A9Q9NUM3 307 aa16.37■□□□□ 0.21
SNIP1-203ENST00000493916 PET100P0DJ07 73 aa16.36■□□□□ 0.21
SNIP1-203ENST00000493916 CXCL3P19876 107 aa16.36■□□□□ 0.21
SNIP1-203ENST00000493916 NANOS2P60321 138 aaKnown RBP16.36■□□□□ 0.21
SNIP1-203ENST00000493916 OR5C1Q8NGR4 320 aa16.36■□□□□ 0.21
SNIP1-203ENST00000493916 PHLDA1Q8WV24 401 aaPredicted RBP16.36■□□□□ 0.21
SNIP1-203ENST00000493916 SLC35B3Q9H1N7 401 aa16.36■□□□□ 0.21
SNIP1-203ENST00000493916 KLK5Q9Y337 293 aaPredicted RBP16.36■□□□□ 0.21
SNIP1-203ENST00000493916 ZNF705FA8MVS1 300 aaPredicted RBP16.35■□□□□ 0.21
SNIP1-203ENST00000493916 DUSP14O95147 198 aaKnown RBP16.35■□□□□ 0.21
SNIP1-203ENST00000493916 ZNF705DP0CH99 300 aaPredicted RBP16.35■□□□□ 0.21
SNIP1-203ENST00000493916 ZNF705BP0CI00 300 aaPredicted RBP16.35■□□□□ 0.21
SNIP1-203ENST00000493916 FXYD7P58549 80 aa16.35■□□□□ 0.21
SNIP1-203ENST00000493916 LCN15Q6UWW0 184 aa16.35■□□□□ 0.21
SNIP1-203ENST00000493916 AMTNQ6UX39 209 aa16.35■□□□□ 0.21
SNIP1-203ENST00000493916 ZNF738Q8NE65 137 aa16.35■□□□□ 0.21
SNIP1-203ENST00000493916 NEU1Q99519 415 aa16.35■□□□□ 0.21
SNIP1-203ENST00000493916 NPCDR1Q9BY65 106 aa16.35■□□□□ 0.21
SNIP1-203ENST00000493916 PXMP4Q9Y6I8 212 aa16.35■□□□□ 0.21
SNIP1-203ENST00000493916 MPC2O95563 127 aa16.34■□□□□ 0.21
SNIP1-203ENST00000493916 LRRC20Q8TCA0 184 aa16.34■□□□□ 0.21
SNIP1-203ENST00000493916 SLC50A1Q9BRV3 221 aa16.34■□□□□ 0.21
SNIP1-203ENST00000493916 RNF126Q9BV68 326 aa16.34■□□□□ 0.21
SNIP1-203ENST00000493916 IGLC2P0DOY2 106 aa16.33■□□□□ 0.2
SNIP1-203ENST00000493916 CNN1P51911 297 aaKnown RBP16.33■□□□□ 0.2
SNIP1-203ENST00000493916 PSG3Q16557 428 aa16.33■□□□□ 0.2
SNIP1-203ENST00000493916 ZNF331Q9NQX6 463 aaPredicted RBP16.33■□□□□ 0.2
SNIP1-203ENST00000493916 ALG5Q9Y673 324 aa16.33■□□□□ 0.2
SNIP1-203ENST00000493916 SMIM9A6NGZ8 99 aa16.32■□□□□ 0.2
SNIP1-203ENST00000493916 HLA-DMBP28068 263 aa16.32■□□□□ 0.2
SNIP1-203ENST00000493916 THAP6Q8TBB0 222 aa16.32■□□□□ 0.2
SNIP1-203ENST00000493916 AMBPP02760 352 aa16.31■□□□□ 0.2
SNIP1-203ENST00000493916 CLINT1Q14677 625 aa16.31■□□□□ 0.2
SNIP1-203ENST00000493916 OR11H7Q8NGC8 314 aa16.31■□□□□ 0.2
SNIP1-203ENST00000493916 TRAV5A0A0B4J249 113 aa16.3■□□□□ 0.2
SNIP1-203ENST00000493916 GUK1Q16774 197 aa16.3■□□□□ 0.2
SNIP1-203ENST00000493916 OR8A1Q8NGG7 326 aa16.3■□□□□ 0.2
SNIP1-203ENST00000493916 WDR61Q9GZS3 305 aaKnown RBP16.3■□□□□ 0.2
SNIP1-203ENST00000493916 KCNIP2Q9NS61 270 aa16.3■□□□□ 0.2
SNIP1-203ENST00000493916 GOLT1BQ9Y3E0 138 aa16.3■□□□□ 0.2
SNIP1-203ENST00000493916 HSPB11Q9Y547 144 aa16.3■□□□□ 0.2
SNIP1-203ENST00000493916 H3BQ15 152 aa16.29■□□□□ 0.2
SNIP1-203ENST00000493916 SLC17A3O00476 420 aa16.29■□□□□ 0.2
SNIP1-203ENST00000493916 RPUSD4Q96CM3 377 aaKnown RBP16.29■□□□□ 0.2
SNIP1-203ENST00000493916 SAT2Q96F10 170 aaPredicted RBP16.29■□□□□ 0.2
SNIP1-203ENST00000493916 IGF2BP2-AS1Q96M15 143 aa16.29■□□□□ 0.2
SNIP1-203ENST00000493916 ATP5SQ99766 215 aa16.29■□□□□ 0.2
SNIP1-203ENST00000493916 MBD2Q9UBB5 411 aa16.29■□□□□ 0.2
SNIP1-203ENST00000493916 TMEM189A5PLL7 270 aa16.28■□□□□ 0.2
SNIP1-203ENST00000493916 C11orf94C9JXX5 98 aa16.28■□□□□ 0.2
SNIP1-203ENST00000493916 SNRPCP09234 159 aaKnown RBP16.28■□□□□ 0.2
SNIP1-203ENST00000493916 HIST1H1AQ02539 215 aaPredicted RBP16.28■□□□□ 0.2
SNIP1-203ENST00000493916 C1orf158Q8N1D5 194 aa16.28■□□□□ 0.2
SNIP1-203ENST00000493916 LINC00476Q8WZB0 136 aa16.28■□□□□ 0.2
SNIP1-203ENST00000493916 TMEM14CQ9P0S9 112 aa16.28■□□□□ 0.2
SNIP1-203ENST00000493916 RFNGQ9Y644 331 aa16.28■□□□□ 0.2
SNIP1-203ENST00000493916 HYDINQ4G0P3 5121 aa16.28■□□□□ 0.2
SNIP1-203ENST00000493916 IGHV3OR16-12A0A075B7B8 117 aa16.27■□□□□ 0.2
SNIP1-203ENST00000493916 BOLA2-SMG1P6H3BVE0 249 aa16.27■□□□□ 0.2
SNIP1-203ENST00000493916 ZNF253O75346 499 aa16.27■□□□□ 0.2
SNIP1-203ENST00000493916 CELA1Q9UNI1 258 aa16.27■□□□□ 0.2
SNIP1-203ENST00000493916 H3BTX0 84 aa16.26■□□□□ 0.19
SNIP1-203ENST00000493916 M0R2Z0 102 aa16.26■□□□□ 0.19
SNIP1-203ENST00000493916 RPL12P30050 165 aaKnown RBP16.26■□□□□ 0.19
SNIP1-203ENST00000493916 SPINK13Q1W4C9 94 aa16.26■□□□□ 0.19
SNIP1-203ENST00000493916 GCSAMLQ5JQS6 135 aa16.26■□□□□ 0.19
SNIP1-203ENST00000493916 CRXO43186 299 aaPredicted RBP16.25■□□□□ 0.19
SNIP1-203ENST00000493916 INSP01308 110 aa16.25■□□□□ 0.19
SNIP1-203ENST00000493916 Q6ZTC4 211 aa16.25■□□□□ 0.19
SNIP1-203ENST00000493916 C2CD4CQ8TF44 421 aa16.25■□□□□ 0.19
SNIP1-203ENST00000493916 ZNF586Q9NXT0 402 aa16.25■□□□□ 0.19
SNIP1-203ENST00000493916 TRBV19A0A075B6N1 114 aa16.24■□□□□ 0.19
SNIP1-203ENST00000493916 C17orf112F2Z3M2 114 aa16.24■□□□□ 0.19
SNIP1-203ENST00000493916 HBE1P02100 147 aa16.24■□□□□ 0.19
SNIP1-203ENST00000493916 RHOBP62745 196 aa16.24■□□□□ 0.19
SNIP1-203ENST00000493916 MED28Q9H204 178 aa16.24■□□□□ 0.19
SNIP1-203ENST00000493916 HIST1H1EP10412 219 aaKnown RBP16.23■□□□□ 0.19
SNIP1-203ENST00000493916 PDE6HQ13956 83 aa16.23■□□□□ 0.19
SNIP1-203ENST00000493916 C12orf74Q32Q52 190 aa16.23■□□□□ 0.19
SNIP1-203ENST00000493916 SLC25A2Q9BXI2 301 aa16.23■□□□□ 0.19
SNIP1-203ENST00000493916 TRAV10A0A0B4J240 114 aa16.22■□□□□ 0.19
SNIP1-203ENST00000493916 TCTAP57738 103 aa16.22■□□□□ 0.19
SNIP1-203ENST00000493916 FCN2Q15485 313 aa16.22■□□□□ 0.19
SNIP1-203ENST00000493916 BAP18Q8IXM2 172 aa16.22■□□□□ 0.19
SNIP1-203ENST00000493916 MRPL53Q96EL3 112 aaKnown RBP16.22■□□□□ 0.19
SNIP1-203ENST00000493916 TMEM208Q9BTX3 173 aa16.22■□□□□ 0.19
SNIP1-203ENST00000493916 MRPL32Q9BYC8 188 aaKnown RBP16.22■□□□□ 0.19
SNIP1-203ENST00000493916 PARD6GQ9BYG4 376 aaPredicted RBP16.22■□□□□ 0.19
SNIP1-203ENST00000493916 PPP1R14DQ9NXH3 145 aa16.22■□□□□ 0.19
SNIP1-203ENST00000493916 TEX48A0A1B0GUV7 120 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms