RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 AKR1C1Q04828 323 aa4.97□□□□□ -1.61
VPS52-219ENST00000493379 RAB31Q13636 194 aa4.97□□□□□ -1.61
VPS52-219ENST00000493379 OPCMLQ14982 345 aa4.97□□□□□ -1.61
VPS52-219ENST00000493379 TMEM88Q6PEY1 159 aa4.97□□□□□ -1.61
VPS52-219ENST00000493379 S100A7AQ86SG5 101 aa4.97□□□□□ -1.61
VPS52-219ENST00000493379 ZNF546Q86UE3 836 aa4.97□□□□□ -1.61
VPS52-219ENST00000493379 TMEM217Q8N7C4 229 aa4.97□□□□□ -1.61
VPS52-219ENST00000493379 OR5C1Q8NGR4 320 aa4.97□□□□□ -1.61
VPS52-219ENST00000493379 TM2D3Q9BRN9 247 aa4.97□□□□□ -1.61
VPS52-219ENST00000493379 SHANK2-AS3Q9BTD1 123 aa4.97□□□□□ -1.61
VPS52-219ENST00000493379 GGTLC1Q9BX51 225 aa4.97□□□□□ -1.61
VPS52-219ENST00000493379 SLC25A39Q9BZJ4 359 aaPredicted RBP4.97□□□□□ -1.61
VPS52-219ENST00000493379 WDR61Q9GZS3 305 aaKnown RBP4.97□□□□□ -1.61
VPS52-219ENST00000493379 DNAJC4Q9NNZ3 241 aa4.97□□□□□ -1.61
VPS52-219ENST00000493379 NRN1Q9NPD7 142 aa4.97□□□□□ -1.61
VPS52-219ENST00000493379 MBD2Q9UBB5 411 aa4.97□□□□□ -1.61
VPS52-219ENST00000493379 IGHV3OR16-13A0A075B7E8 117 aa4.96□□□□□ -1.62
VPS52-219ENST00000493379 A0A087X0K7 114 aa4.96□□□□□ -1.62
VPS52-219ENST00000493379 IGHV3-49A0A0A0MS15 119 aa4.96□□□□□ -1.62
VPS52-219ENST00000493379 IGHV3-74A0A0B4J1X5 117 aa4.96□□□□□ -1.62
VPS52-219ENST00000493379 KIR2DL5BA0A0G2JN68 375 aa4.96□□□□□ -1.62
VPS52-219ENST00000493379 KIR2DL5BA0A0G2JPC4 375 aa4.96□□□□□ -1.62
VPS52-219ENST00000493379 PGPEP1LA6NFU8 196 aa4.96□□□□□ -1.62
VPS52-219ENST00000493379 CAMLGP49069 296 aa4.96□□□□□ -1.62
VPS52-219ENST00000493379 CD81P60033 236 aa4.96□□□□□ -1.62
VPS52-219ENST00000493379 LYZP61626 148 aa4.96□□□□□ -1.62
VPS52-219ENST00000493379 OR2F1Q13607 317 aa4.96□□□□□ -1.62
VPS52-219ENST00000493379 GUCA2BQ16661 112 aa4.96□□□□□ -1.62
VPS52-219ENST00000493379 LRRC37A5PQ49AS3 106 aa4.96□□□□□ -1.62
VPS52-219ENST00000493379 SAMD13Q5VXD3 122 aa4.96□□□□□ -1.62
VPS52-219ENST00000493379 SIGLEC15Q6ZMC9 328 aa4.96□□□□□ -1.62
VPS52-219ENST00000493379 SBSPONQ8IVN8 264 aa4.96□□□□□ -1.62
VPS52-219ENST00000493379 KIR2DL5AQ8N109 375 aa4.96□□□□□ -1.62
VPS52-219ENST00000493379 DEFB125Q8N687 156 aa4.96□□□□□ -1.62
VPS52-219ENST00000493379 OR1B1Q8NGR6 318 aa4.96□□□□□ -1.62
VPS52-219ENST00000493379 KIR2DL5BQ8NHK3 375 aa4.96□□□□□ -1.62
VPS52-219ENST00000493379 THAP6Q8TBB0 222 aa4.96□□□□□ -1.62
VPS52-219ENST00000493379 ATP5SQ99766 215 aa4.96□□□□□ -1.62
VPS52-219ENST00000493379 NPCDR1Q9BY65 106 aa4.96□□□□□ -1.62
VPS52-219ENST00000493379 TNFSF18Q9UNG2 199 aa4.96□□□□□ -1.62
VPS52-219ENST00000493379 SMCO3A2RU48 225 aa4.95□□□□□ -1.62
VPS52-219ENST00000493379 RNF222A6NCQ9 220 aa4.95□□□□□ -1.62
VPS52-219ENST00000493379 A8MTW9 85 aa4.95□□□□□ -1.62
VPS52-219ENST00000493379 PRYO14603 147 aa4.95□□□□□ -1.62
VPS52-219ENST00000493379 JTBO76095 146 aa4.95□□□□□ -1.62
VPS52-219ENST00000493379 ORM2P19652 201 aa4.95□□□□□ -1.62
VPS52-219ENST00000493379 MEOX2P50222 304 aa4.95□□□□□ -1.62
VPS52-219ENST00000493379 B2MP61769 119 aa4.95□□□□□ -1.62
VPS52-219ENST00000493379 FOXI1Q12951 378 aa4.95□□□□□ -1.62
VPS52-219ENST00000493379 HAGHQ16775 308 aa4.95□□□□□ -1.62
VPS52-219ENST00000493379 Q6ZRG5 221 aa4.95□□□□□ -1.62
VPS52-219ENST00000493379 OR2T35Q8NGX2 323 aa4.95□□□□□ -1.62
VPS52-219ENST00000493379 CTDSP1Q9GZU7 261 aa4.95□□□□□ -1.62
VPS52-219ENST00000493379 ARV1Q9H2C2 271 aa4.95□□□□□ -1.62
VPS52-219ENST00000493379 MAP6D1Q9H9H5 199 aa4.95□□□□□ -1.62
VPS52-219ENST00000493379 WFDC1Q9HC57 220 aa4.95□□□□□ -1.62
VPS52-219ENST00000493379 SLC39A9Q9NUM3 307 aa4.95□□□□□ -1.62
VPS52-219ENST00000493379 HIGD1AQ9Y241 93 aa4.95□□□□□ -1.62
VPS52-219ENST00000493379 IGHV3-66A0A0C4DH42 116 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 HMSDA8MTL9 139 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 DNASE2O00115 360 aaPredicted RBP4.94□□□□□ -1.62
VPS52-219ENST00000493379 UBE2CO00762 179 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 ISLRO14498 428 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 ZNF253O75346 499 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 OR5G3P0C626 314 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 RPL7P18124 248 aaKnown RBP4.94□□□□□ -1.62
VPS52-219ENST00000493379 CXCL2P19875 107 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 FGF7P21781 194 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 GALR1P47211 349 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 PSMB3P49720 205 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 MIC13Q5XKP0 118 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 LINC00305Q7Z4B0 112 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 OR8I2Q8N0Y5 310 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 FAM24BQ8N5W8 94 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 OR1L4Q8NGR5 311 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 OR2G3Q8NGZ4 309 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 SAT2Q96F10 170 aaPredicted RBP4.94□□□□□ -1.62
VPS52-219ENST00000493379 ST6GAL2Q96JF0 529 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 PFDN5Q99471 154 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 PBDC1Q9BVG4 233 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 ARL6Q9H0F7 186 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 SRD5A3Q9H8P0 318 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 TMEM14CQ9P0S9 112 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 TP53TG1Q9Y2A0 90 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 TIMM9Q9Y5J7 89 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 HSPG2P98160 4391 aa4.94□□□□□ -1.62
VPS52-219ENST00000493379 LOC102724200A0A096LPH7 203 aaPredicted RBP4.93□□□□□ -1.62
VPS52-219ENST00000493379 TRAV8-2A0A0B4J237 113 aa4.93□□□□□ -1.62
VPS52-219ENST00000493379 UBE2L5PA0A1B0GUS4 154 aa4.93□□□□□ -1.62
VPS52-219ENST00000493379 TAAR5O14804 337 aa4.93□□□□□ -1.62
VPS52-219ENST00000493379 GIG44P09565 113 aaPredicted RBP4.93□□□□□ -1.62
VPS52-219ENST00000493379 IGLC2P0DOY2 106 aa4.93□□□□□ -1.62
VPS52-219ENST00000493379 DEFB131AP59861 70 aa4.93□□□□□ -1.62
VPS52-219ENST00000493379 SNRPD3P62318 126 aaKnown RBP4.93□□□□□ -1.62
VPS52-219ENST00000493379 SERF2P84101 59 aa4.93□□□□□ -1.62
VPS52-219ENST00000493379 ZNF266Q14584 549 aa4.93□□□□□ -1.62
VPS52-219ENST00000493379 ZNF345Q14585 488 aa4.93□□□□□ -1.62
VPS52-219ENST00000493379 CLINT1Q14677 625 aa4.93□□□□□ -1.62
VPS52-219ENST00000493379 MORN5Q5VZ52 161 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms