RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	OXA1L	Q15070	435 aa		10.92	□□□□□ -0.66
MRPL55-231	ENST00000492170	RGS21	Q2M5E4	152 aa		10.92	□□□□□ -0.66
MRPL55-231	ENST00000492170	LGALS9B	Q3B8N2	356 aa		10.92	□□□□□ -0.66
MRPL55-231	ENST00000492170	TMEM182	Q6ZP80	229 aa	Predicted RBP	10.92	□□□□□ -0.66
MRPL55-231	ENST00000492170	C1orf158	Q8N1D5	194 aa		10.92	□□□□□ -0.66
MRPL55-231	ENST00000492170	TMEM252	Q8N6L7	170 aa		10.92	□□□□□ -0.66
MRPL55-231	ENST00000492170	C20orf173	Q96LM9	149 aa		10.92	□□□□□ -0.66
MRPL55-231	ENST00000492170	GPR82	Q96P67	336 aa		10.92	□□□□□ -0.66
MRPL55-231	ENST00000492170	TMEM208	Q9BTX3	173 aa		10.92	□□□□□ -0.66
MRPL55-231	ENST00000492170	RSG1	Q9BU20	258 aa		10.92	□□□□□ -0.66
MRPL55-231	ENST00000492170	TMEM147	Q9BVK8	224 aa		10.92	□□□□□ -0.66
MRPL55-231	ENST00000492170	YTHDF2	Q9Y5A9	579 aa	Known RBP	10.92	□□□□□ -0.66
MRPL55-231	ENST00000492170	DYNC1H1	Q14204	4646 aa	Known RBP	10.91	□□□□□ -0.66
MRPL55-231	ENST00000492170	SMCO3	A2RU48	225 aa		10.91	□□□□□ -0.66
MRPL55-231	ENST00000492170		H0YIZ8	118 aa		10.91	□□□□□ -0.66
MRPL55-231	ENST00000492170	ORM2	P19652	201 aa		10.91	□□□□□ -0.66
MRPL55-231	ENST00000492170	SLC38A11	Q08AI6	406 aa		10.91	□□□□□ -0.66
MRPL55-231	ENST00000492170	VWC2	Q2TAL6	325 aa		10.91	□□□□□ -0.66
MRPL55-231	ENST00000492170	TEPP	Q6URK8	271 aa		10.91	□□□□□ -0.66
MRPL55-231	ENST00000492170	CYP2G1P	Q6ZSU1	146 aa		10.91	□□□□□ -0.66
MRPL55-231	ENST00000492170	OR1B1	Q8NGR6	318 aa		10.91	□□□□□ -0.66
MRPL55-231	ENST00000492170	PPP1R1C	Q8WVI7	109 aa		10.91	□□□□□ -0.66
MRPL55-231	ENST00000492170	IGF2BP2-AS1	Q96M15	143 aa		10.91	□□□□□ -0.66
MRPL55-231	ENST00000492170	OR5AC2	Q9NZP5	309 aa		10.91	□□□□□ -0.66
MRPL55-231	ENST00000492170		A8MTW9	85 aa		10.9	□□□□□ -0.66
MRPL55-231	ENST00000492170		E5RGE8	158 aa		10.9	□□□□□ -0.66
MRPL55-231	ENST00000492170	RTL8C	O15255	209 aa		10.9	□□□□□ -0.66
MRPL55-231	ENST00000492170	CST7	O76096	145 aa		10.9	□□□□□ -0.66
MRPL55-231	ENST00000492170	RLN2	P04090	185 aa		10.9	□□□□□ -0.66
MRPL55-231	ENST00000492170	GATA2	P23769	480 aa	Predicted RBP	10.9	□□□□□ -0.66
MRPL55-231	ENST00000492170	PLP1	P60201	277 aa		10.9	□□□□□ -0.66
MRPL55-231	ENST00000492170	DAD1	P61803	113 aa		10.9	□□□□□ -0.66
MRPL55-231	ENST00000492170	SELENOT	P62341	195 aa		10.9	□□□□□ -0.66
MRPL55-231	ENST00000492170	LRRC37A5P	Q49AS3	106 aa		10.9	□□□□□ -0.66
MRPL55-231	ENST00000492170	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		10.9	□□□□□ -0.66
MRPL55-231	ENST00000492170	STX12	Q86Y82	276 aa		10.9	□□□□□ -0.66
MRPL55-231	ENST00000492170	DNAH11	Q96DT5	4516 aa		10.89	□□□□□ -0.67
MRPL55-231	ENST00000492170	IGLV2-18	A0A075B6J9	118 aa		10.89	□□□□□ -0.67
MRPL55-231	ENST00000492170	DUSP14	O95147	198 aa	Known RBP	10.89	□□□□□ -0.67
MRPL55-231	ENST00000492170	MPC2	O95563	127 aa		10.89	□□□□□ -0.67
MRPL55-231	ENST00000492170	CXCL3	P19876	107 aa		10.89	□□□□□ -0.67
MRPL55-231	ENST00000492170	S100A11	P31949	105 aa		10.89	□□□□□ -0.67
MRPL55-231	ENST00000492170	AMTN	Q6UX39	209 aa		10.89	□□□□□ -0.67
MRPL55-231	ENST00000492170	PLA2G2E	Q9NZK7	142 aa		10.89	□□□□□ -0.67
MRPL55-231	ENST00000492170	WDR83OS	Q9Y284	106 aa		10.89	□□□□□ -0.67
MRPL55-231	ENST00000492170	INS	P01308	110 aa		10.88	□□□□□ -0.67
MRPL55-231	ENST00000492170	PET100	P0DJ07	73 aa		10.88	□□□□□ -0.67
MRPL55-231	ENST00000492170	CNN1	P51911	297 aa	Known RBP	10.88	□□□□□ -0.67
MRPL55-231	ENST00000492170	HBG1	P69891	147 aa		10.88	□□□□□ -0.67
MRPL55-231	ENST00000492170	HBG2	P69892	147 aa		10.88	□□□□□ -0.67
MRPL55-231	ENST00000492170	FGL1	Q08830	312 aa		10.88	□□□□□ -0.67
MRPL55-231	ENST00000492170	RNF212	Q495C1	297 aa		10.88	□□□□□ -0.67
MRPL55-231	ENST00000492170	OR11H7	Q8NGC8	314 aa		10.88	□□□□□ -0.67
MRPL55-231	ENST00000492170	C17orf77	Q96MU5	243 aa		10.88	□□□□□ -0.67
MRPL55-231	ENST00000492170	UQCC1	Q9NVA1	299 aa		10.88	□□□□□ -0.67
MRPL55-231	ENST00000492170		H3BRN7	92 aa		10.87	□□□□□ -0.67
MRPL55-231	ENST00000492170	AGPAT2	O15120	278 aa		10.87	□□□□□ -0.67
MRPL55-231	ENST00000492170	LINC00869	P0C866	280 aa		10.87	□□□□□ -0.67
MRPL55-231	ENST00000492170	MED14OS	P0DP75	135 aa		10.87	□□□□□ -0.67
MRPL55-231	ENST00000492170	RAP2B	P61225	183 aa		10.87	□□□□□ -0.67
MRPL55-231	ENST00000492170	B2M	P61769	119 aa		10.87	□□□□□ -0.67
MRPL55-231	ENST00000492170	BAX	Q07812	192 aa		10.87	□□□□□ -0.67
MRPL55-231	ENST00000492170	FCN2	Q15485	313 aa		10.87	□□□□□ -0.67
MRPL55-231	ENST00000492170	ATP6V1F	Q16864	119 aa		10.87	□□□□□ -0.67
MRPL55-231	ENST00000492170	SPINK13	Q1W4C9	94 aa		10.87	□□□□□ -0.67
MRPL55-231	ENST00000492170	SOHLH1	Q5JUK2	328 aa		10.87	□□□□□ -0.67
MRPL55-231	ENST00000492170	TMEM88	Q6PEY1	159 aa		10.87	□□□□□ -0.67
MRPL55-231	ENST00000492170	ZNF546	Q86UE3	836 aa		10.87	□□□□□ -0.67
MRPL55-231	ENST00000492170	MGST2	Q99735	147 aa		10.87	□□□□□ -0.67
MRPL55-231	ENST00000492170	SLC25A31	Q9H0C2	315 aa		10.87	□□□□□ -0.67
MRPL55-231	ENST00000492170	HIGD1A	Q9Y241	93 aa		10.87	□□□□□ -0.67
MRPL55-231	ENST00000492170		M0R2Z0	102 aa		10.86	□□□□□ -0.67
MRPL55-231	ENST00000492170	RPL7	P18124	248 aa	Known RBP	10.86	□□□□□ -0.67
MRPL55-231	ENST00000492170	NHLH2	Q02577	135 aa		10.86	□□□□□ -0.67
MRPL55-231	ENST00000492170	PXDC1	Q5TGL8	231 aa		10.86	□□□□□ -0.67
MRPL55-231	ENST00000492170	IGFL4	Q6B9Z1	124 aa		10.86	□□□□□ -0.67
MRPL55-231	ENST00000492170		Q6ZR54	194 aa		10.86	□□□□□ -0.67
MRPL55-231	ENST00000492170	C15orf53	Q8NAA6	179 aa		10.86	□□□□□ -0.67
MRPL55-231	ENST00000492170	ZNF738	Q8NE65	137 aa		10.86	□□□□□ -0.67
MRPL55-231	ENST00000492170	CHAC2	Q8WUX2	184 aa		10.86	□□□□□ -0.67
MRPL55-231	ENST00000492170	SHANK2-AS3	Q9BTD1	123 aa		10.86	□□□□□ -0.67
MRPL55-231	ENST00000492170	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	10.86	□□□□□ -0.67
MRPL55-231	ENST00000492170	MED28	Q9H204	178 aa		10.86	□□□□□ -0.67
MRPL55-231	ENST00000492170	PKD1	P98161	4303 aa		10.85	□□□□□ -0.67
MRPL55-231	ENST00000492170	TRAV8-2	A0A0B4J237	113 aa		10.85	□□□□□ -0.67
MRPL55-231	ENST00000492170	UBE2L5P	A0A1B0GUS4	154 aa		10.85	□□□□□ -0.67
MRPL55-231	ENST00000492170	LYRM9	A8MSI8	78 aa		10.85	□□□□□ -0.67
MRPL55-231	ENST00000492170	ZNF705G	A8MUZ8	300 aa	Predicted RBP	10.85	□□□□□ -0.67
MRPL55-231	ENST00000492170	HYPM	O75409	117 aa		10.85	□□□□□ -0.67
MRPL55-231	ENST00000492170	S100A7A	Q86SG5	101 aa		10.85	□□□□□ -0.67
MRPL55-231	ENST00000492170	RNF182	Q8N6D2	247 aa		10.85	□□□□□ -0.67
MRPL55-231	ENST00000492170	ASB13	Q8WXK3	278 aa		10.85	□□□□□ -0.67
MRPL55-231	ENST00000492170	RYR1	P21817	5038 aa		10.84	□□□□□ -0.67
MRPL55-231	ENST00000492170	BOLA2-SMG1P6	H3BVE0	249 aa		10.84	□□□□□ -0.67
MRPL55-231	ENST00000492170	CRX	O43186	299 aa	Predicted RBP	10.84	□□□□□ -0.67
MRPL55-231	ENST00000492170	MPDU1	O75352	247 aa		10.84	□□□□□ -0.67
MRPL55-231	ENST00000492170	OR5G3	P0C626	314 aa		10.84	□□□□□ -0.67
MRPL55-231	ENST00000492170	TSPO	P30536	169 aa		10.84	□□□□□ -0.67
MRPL55-231	ENST00000492170	CAMLG	P49069	296 aa		10.84	□□□□□ -0.67
MRPL55-231	ENST00000492170	FAM3B	P58499	235 aa	Predicted RBP	10.84	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms