RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 WDR83OSQ9Y284 106 aa11.94□□□□□ -0.5
PDLIM2-217ENST00000491330 A0A087X0K7 114 aa11.93□□□□□ -0.5
PDLIM2-217ENST00000491330 F6UB75 175 aa11.93□□□□□ -0.5
PDLIM2-217ENST00000491330 P0DMU3 169 aa11.93□□□□□ -0.5
PDLIM2-217ENST00000491330 FAM231AP0DMU4 169 aa11.93□□□□□ -0.5
PDLIM2-217ENST00000491330 FAM231CP0DMU5 169 aa11.93□□□□□ -0.5
PDLIM2-217ENST00000491330 CAMLGP49069 296 aa11.93□□□□□ -0.5
PDLIM2-217ENST00000491330 ARL16Q0P5N6 197 aa11.93□□□□□ -0.5
PDLIM2-217ENST00000491330 C12orf74Q32Q52 190 aa11.93□□□□□ -0.5
PDLIM2-217ENST00000491330 TMEM182Q6ZP80 229 aaPredicted RBP11.93□□□□□ -0.5
PDLIM2-217ENST00000491330 OR1L4Q8NGR5 311 aa11.93□□□□□ -0.5
PDLIM2-217ENST00000491330 PFDN5Q99471 154 aa11.93□□□□□ -0.5
PDLIM2-217ENST00000491330 NIPSNAP3BQ9BS92 247 aa11.93□□□□□ -0.5
PDLIM2-217ENST00000491330 LOC102723971A0A1B0GUV8 181 aa11.92□□□□□ -0.5
PDLIM2-217ENST00000491330 FAM24AA6NFZ4 105 aa11.92□□□□□ -0.5
PDLIM2-217ENST00000491330 RPL29P47914 159 aaKnown RBP11.92□□□□□ -0.5
PDLIM2-217ENST00000491330 CNN1P51911 297 aaKnown RBP11.92□□□□□ -0.5
PDLIM2-217ENST00000491330 C10orf113Q5VZT2 155 aa11.92□□□□□ -0.5
PDLIM2-217ENST00000491330 LCN15Q6UWW0 184 aa11.92□□□□□ -0.5
PDLIM2-217ENST00000491330 LINC00305Q7Z4B0 112 aa11.92□□□□□ -0.5
PDLIM2-217ENST00000491330 SLC50A1Q9BRV3 221 aa11.92□□□□□ -0.5
PDLIM2-217ENST00000491330 KCNIP2Q9NS61 270 aa11.92□□□□□ -0.5
PDLIM2-217ENST00000491330 SSNA1O43805 119 aa11.91□□□□□ -0.5
PDLIM2-217ENST00000491330 CST7O76096 145 aa11.91□□□□□ -0.5
PDLIM2-217ENST00000491330 DEFB1P60022 68 aa11.91□□□□□ -0.5
PDLIM2-217ENST00000491330 HIST1H1AQ02539 215 aaPredicted RBP11.91□□□□□ -0.5
PDLIM2-217ENST00000491330 PSG3Q16557 428 aa11.91□□□□□ -0.5
PDLIM2-217ENST00000491330 RPP25LQ8N5L8 163 aaKnown RBP11.91□□□□□ -0.5
PDLIM2-217ENST00000491330 ZNF709Q8N972 641 aa11.91□□□□□ -0.5
PDLIM2-217ENST00000491330 UHRF2Q96PU4 802 aa11.91□□□□□ -0.5
PDLIM2-217ENST00000491330 TSPOP30536 169 aa11.9□□□□□ -0.5
PDLIM2-217ENST00000491330 DAD1P61803 113 aa11.9□□□□□ -0.5
PDLIM2-217ENST00000491330 PRR20EP86478 221 aa11.9□□□□□ -0.5
PDLIM2-217ENST00000491330 PRR20CP86479 221 aa11.9□□□□□ -0.5
PDLIM2-217ENST00000491330 PRR20DP86480 221 aa11.9□□□□□ -0.5
PDLIM2-217ENST00000491330 PRR20BP86481 221 aa11.9□□□□□ -0.5
PDLIM2-217ENST00000491330 PRR20AP86496 221 aa11.9□□□□□ -0.5
PDLIM2-217ENST00000491330 OXA1LQ15070 435 aa11.9□□□□□ -0.5
PDLIM2-217ENST00000491330 ZNF767PQ75MW2 155 aa11.9□□□□□ -0.5
PDLIM2-217ENST00000491330 TMEM256Q8N2U0 113 aa11.9□□□□□ -0.5
PDLIM2-217ENST00000491330 OR10J6PQ8NGY7 276 aa11.9□□□□□ -0.5
PDLIM2-217ENST00000491330 MGST2Q99735 147 aa11.9□□□□□ -0.5
PDLIM2-217ENST00000491330 DNAJC4Q9NNZ3 241 aa11.9□□□□□ -0.5
PDLIM2-217ENST00000491330 CSMD3Q7Z407 3707 aa11.89□□□□□ -0.51
PDLIM2-217ENST00000491330 IGSF23A1L1A6 192 aa11.89□□□□□ -0.51
PDLIM2-217ENST00000491330 BOLA2-SMG1P6H3BVE0 249 aa11.89□□□□□ -0.51
PDLIM2-217ENST00000491330 CXCL3P19876 107 aa11.89□□□□□ -0.51
PDLIM2-217ENST00000491330 GUK1Q16774 197 aa11.89□□□□□ -0.51
PDLIM2-217ENST00000491330 FAM222AQ5U5X8 452 aa11.89□□□□□ -0.51
PDLIM2-217ENST00000491330 UBE2DNLQ8IWF7 75 aa11.89□□□□□ -0.51
PDLIM2-217ENST00000491330 RNF182Q8N6D2 247 aa11.89□□□□□ -0.51
PDLIM2-217ENST00000491330 OR8A1Q8NGG7 326 aa11.89□□□□□ -0.51
PDLIM2-217ENST00000491330 ASB13Q8WXK3 278 aa11.89□□□□□ -0.51
PDLIM2-217ENST00000491330 C20orf173Q96LM9 149 aa11.89□□□□□ -0.51
PDLIM2-217ENST00000491330 DKK2Q9UBU2 259 aa11.89□□□□□ -0.51
PDLIM2-217ENST00000491330 CELA1Q9UNI1 258 aa11.89□□□□□ -0.51
PDLIM2-217ENST00000491330 YTHDF2Q9Y5A9 579 aaKnown RBP11.89□□□□□ -0.51
PDLIM2-217ENST00000491330 PXMP4Q9Y6I8 212 aa11.89□□□□□ -0.51
PDLIM2-217ENST00000491330 DYNC2H1Q8NCM8 4307 aaKnown RBP11.89□□□□□ -0.51
PDLIM2-217ENST00000491330 A8MTW9 85 aa11.88□□□□□ -0.51
PDLIM2-217ENST00000491330 HTN3P15516 51 aa11.88□□□□□ -0.51
PDLIM2-217ENST00000491330 OPCMLQ14982 345 aa11.88□□□□□ -0.51
PDLIM2-217ENST00000491330 SPINK13Q1W4C9 94 aa11.88□□□□□ -0.51
PDLIM2-217ENST00000491330 OR11H7Q8NGC8 314 aa11.88□□□□□ -0.51
PDLIM2-217ENST00000491330 PPP1R1CQ8WVI7 109 aa11.88□□□□□ -0.51
PDLIM2-217ENST00000491330 RPUSD4Q96CM3 377 aaKnown RBP11.88□□□□□ -0.51
PDLIM2-217ENST00000491330 LINC01587Q99440 93 aa11.88□□□□□ -0.51
PDLIM2-217ENST00000491330 STARD9Q9P2P6 4700 aa11.88□□□□□ -0.51
PDLIM2-217ENST00000491330 UBE2L5PA0A1B0GUS4 154 aa11.87□□□□□ -0.51
PDLIM2-217ENST00000491330 LYRM9A8MSI8 78 aa11.87□□□□□ -0.51
PDLIM2-217ENST00000491330 H2BFSP57053 126 aa11.87□□□□□ -0.51
PDLIM2-217ENST00000491330 PATE2Q6UY27 113 aa11.87□□□□□ -0.51
PDLIM2-217ENST00000491330 C1orf158Q8N1D5 194 aa11.87□□□□□ -0.51
PDLIM2-217ENST00000491330 M0R2Z0 102 aa11.86□□□□□ -0.51
PDLIM2-217ENST00000491330 ZNF253O75346 499 aa11.86□□□□□ -0.51
PDLIM2-217ENST00000491330 SIX6O95475 246 aa11.86□□□□□ -0.51
PDLIM2-217ENST00000491330 MPC2O95563 127 aa11.86□□□□□ -0.51
PDLIM2-217ENST00000491330 CDKN1BP46527 198 aa11.86□□□□□ -0.51
PDLIM2-217ENST00000491330 IGFL4Q6B9Z1 124 aa11.86□□□□□ -0.51
PDLIM2-217ENST00000491330 CCDC28AQ8IWP9 274 aa11.86□□□□□ -0.51
PDLIM2-217ENST00000491330 POM121L12Q8N7R1 296 aa11.86□□□□□ -0.51
PDLIM2-217ENST00000491330 OR5C1Q8NGR4 320 aa11.86□□□□□ -0.51
PDLIM2-217ENST00000491330 TMEM37Q8WXS4 190 aa11.86□□□□□ -0.51
PDLIM2-217ENST00000491330 SLC39A9Q9NUM3 307 aa11.86□□□□□ -0.51
PDLIM2-217ENST00000491330 RYR2Q92736 4967 aa11.85□□□□□ -0.51
PDLIM2-217ENST00000491330 TRAV8-2A0A0B4J237 113 aa11.85□□□□□ -0.51
PDLIM2-217ENST00000491330 C17orf112F2Z3M2 114 aa11.85□□□□□ -0.51
PDLIM2-217ENST00000491330 MRPS12O15235 138 aaKnown RBP11.85□□□□□ -0.51
PDLIM2-217ENST00000491330 FGF7P21781 194 aa11.85□□□□□ -0.51
PDLIM2-217ENST00000491330 TAS2R60P59551 318 aa11.85□□□□□ -0.51
PDLIM2-217ENST00000491330 LRRC37A5PQ49AS3 106 aa11.85□□□□□ -0.51
PDLIM2-217ENST00000491330 AMTNQ6UX39 209 aa11.85□□□□□ -0.51
PDLIM2-217ENST00000491330 NPCDR1Q9BY65 106 aa11.85□□□□□ -0.51
PDLIM2-217ENST00000491330 ZNF331Q9NQX6 463 aaPredicted RBP11.85□□□□□ -0.51
PDLIM2-217ENST00000491330 HTN1P15515 57 aa11.84□□□□□ -0.51
PDLIM2-217ENST00000491330 MIC13Q5XKP0 118 aa11.84□□□□□ -0.51
PDLIM2-217ENST00000491330 ZNF493Q6ZR52 646 aa11.84□□□□□ -0.51
PDLIM2-217ENST00000491330 C17orf77Q96MU5 243 aa11.84□□□□□ -0.51
PDLIM2-217ENST00000491330 C20orf144Q9BQM9 153 aa11.84□□□□□ -0.51
PDLIM2-217ENST00000491330 OR5AC2Q9NZP5 309 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms