RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 OR10P1Q8NGE3 313 aa11.08□□□□□ -0.64
SMPD4-220ENST00000491319 ARV1Q9H2C2 271 aa11.08□□□□□ -0.64
SMPD4-220ENST00000491319 NPVFQ9HCQ7 196 aa11.08□□□□□ -0.64
SMPD4-220ENST00000491319 TSC22D2O75157 780 aa11.07□□□□□ -0.64
SMPD4-220ENST00000491319 DEFB130BP0DP73 79 aa11.07□□□□□ -0.64
SMPD4-220ENST00000491319 DEFB130AP0DP74 79 aa11.07□□□□□ -0.64
SMPD4-220ENST00000491319 TSPOP30536 169 aa11.07□□□□□ -0.64
SMPD4-220ENST00000491319 B2MP61769 119 aa11.07□□□□□ -0.64
SMPD4-220ENST00000491319 RHOBP62745 196 aa11.07□□□□□ -0.64
SMPD4-220ENST00000491319 ARL16Q0P5N6 197 aa11.07□□□□□ -0.64
SMPD4-220ENST00000491319 FCN2Q15485 313 aa11.07□□□□□ -0.64
SMPD4-220ENST00000491319 PSG3Q16557 428 aa11.07□□□□□ -0.64
SMPD4-220ENST00000491319 C15orf53Q8NAA6 179 aa11.07□□□□□ -0.64
SMPD4-220ENST00000491319 LRRC20Q8TCA0 184 aa11.07□□□□□ -0.64
SMPD4-220ENST00000491319 GSKIPQ9P0R6 139 aa11.07□□□□□ -0.64
SMPD4-220ENST00000491319 PKD1P98161 4303 aa11.07□□□□□ -0.64
SMPD4-220ENST00000491319 DYNC1H1Q14204 4646 aaKnown RBP11.06□□□□□ -0.64
SMPD4-220ENST00000491319 SNRPCP09234 159 aaKnown RBP11.06□□□□□ -0.64
SMPD4-220ENST00000491319 TAS2R30P59541 319 aa11.06□□□□□ -0.64
SMPD4-220ENST00000491319 ZNF546Q86UE3 836 aa11.06□□□□□ -0.64
SMPD4-220ENST00000491319 MITD1Q8WV92 249 aa11.06□□□□□ -0.64
SMPD4-220ENST00000491319 RPUSD4Q96CM3 377 aaKnown RBP11.06□□□□□ -0.64
SMPD4-220ENST00000491319 LINC01587Q99440 93 aa11.06□□□□□ -0.64
SMPD4-220ENST00000491319 DNAH11Q96DT5 4516 aa11.05□□□□□ -0.64
SMPD4-220ENST00000491319 C7orf66A4D0T2 115 aa11.05□□□□□ -0.64
SMPD4-220ENST00000491319 CENPXA8MT69 81 aa11.05□□□□□ -0.64
SMPD4-220ENST00000491319 CCSO14618 274 aa11.05□□□□□ -0.64
SMPD4-220ENST00000491319 GOSR2O14653 212 aa11.05□□□□□ -0.64
SMPD4-220ENST00000491319 AGPAT2O15120 278 aa11.05□□□□□ -0.64
SMPD4-220ENST00000491319 MBPP02686 304 aaPredicted RBP11.05□□□□□ -0.64
SMPD4-220ENST00000491319 IL7P13232 177 aa11.05□□□□□ -0.64
SMPD4-220ENST00000491319 HTN1P15515 57 aa11.05□□□□□ -0.64
SMPD4-220ENST00000491319 LCN15Q6UWW0 184 aa11.05□□□□□ -0.64
SMPD4-220ENST00000491319 LINC00305Q7Z4B0 112 aa11.05□□□□□ -0.64
SMPD4-220ENST00000491319 S100A7AQ86SG5 101 aa11.05□□□□□ -0.64
SMPD4-220ENST00000491319 TMEM256Q8N2U0 113 aa11.05□□□□□ -0.64
SMPD4-220ENST00000491319 PPP1R14DQ9NXH3 145 aa11.05□□□□□ -0.64
SMPD4-220ENST00000491319 PCLOQ9Y6V0 5065 aa11.04□□□□□ -0.64
SMPD4-220ENST00000491319 F5H768 121 aa11.04□□□□□ -0.64
SMPD4-220ENST00000491319 MED14OSP0DP75 135 aa11.04□□□□□ -0.64
SMPD4-220ENST00000491319 CXCL2P19875 107 aa11.04□□□□□ -0.64
SMPD4-220ENST00000491319 PXDC1Q5TGL8 231 aa11.04□□□□□ -0.64
SMPD4-220ENST00000491319 MORN5Q5VZ52 161 aa11.04□□□□□ -0.64
SMPD4-220ENST00000491319 MGST2Q99735 147 aa11.04□□□□□ -0.64
SMPD4-220ENST00000491319 C20orf85Q9H1P6 137 aa11.04□□□□□ -0.64
SMPD4-220ENST00000491319 ZNF331Q9NQX6 463 aaPredicted RBP11.04□□□□□ -0.64
SMPD4-220ENST00000491319 H3BTX0 84 aa11.03□□□□□ -0.64
SMPD4-220ENST00000491319 SLC17A3O00476 420 aa11.03□□□□□ -0.64
SMPD4-220ENST00000491319 COX7A2P2O60397 106 aa11.03□□□□□ -0.64
SMPD4-220ENST00000491319 CDKN1BP46527 198 aa11.03□□□□□ -0.64
SMPD4-220ENST00000491319 TAS2R60P59551 318 aa11.03□□□□□ -0.64
SMPD4-220ENST00000491319 KIR3DS1Q14943 382 aa11.03□□□□□ -0.64
SMPD4-220ENST00000491319 C1orf134Q5TEV5 83 aa11.03□□□□□ -0.64
SMPD4-220ENST00000491319 TMEM37Q8WXS4 190 aa11.03□□□□□ -0.64
SMPD4-220ENST00000491319 C16orf74Q96GX8 76 aa11.03□□□□□ -0.64
SMPD4-220ENST00000491319 SLC50A1Q9BRV3 221 aa11.03□□□□□ -0.64
SMPD4-220ENST00000491319 ATG101Q9BSB4 218 aa11.03□□□□□ -0.64
SMPD4-220ENST00000491319 PARD6GQ9BYG4 376 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-220ENST00000491319 RNF24Q9Y225 148 aa11.03□□□□□ -0.64
SMPD4-220ENST00000491319 NUDT3O95989 172 aa11.02□□□□□ -0.65
SMPD4-220ENST00000491319 ATP5G1P05496 136 aa11.02□□□□□ -0.65
SMPD4-220ENST00000491319 ATP5G3P48201 142 aa11.02□□□□□ -0.65
SMPD4-220ENST00000491319 OPCMLQ14982 345 aa11.02□□□□□ -0.65
SMPD4-220ENST00000491319 SOHLH1Q5JUK2 328 aa11.02□□□□□ -0.65
SMPD4-220ENST00000491319 BPIFA4PQ86YQ2 179 aa11.02□□□□□ -0.65
SMPD4-220ENST00000491319 RNASE8Q8TDE3 154 aaKnown RBP11.02□□□□□ -0.65
SMPD4-220ENST00000491319 GGACTQ9BVM4 153 aa11.02□□□□□ -0.65
SMPD4-220ENST00000491319 LSM5Q9Y4Y9 91 aaKnown RBP11.02□□□□□ -0.65
SMPD4-220ENST00000491319 PRAC2D3DTV9 90 aa11.01□□□□□ -0.65
SMPD4-220ENST00000491319 L7N2F9 121 aa11.01□□□□□ -0.65
SMPD4-220ENST00000491319 PLA2G10O15496 165 aa11.01□□□□□ -0.65
SMPD4-220ENST00000491319 FAM3BP58499 235 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-220ENST00000491319 VAMP2P63027 116 aa11.01□□□□□ -0.65
SMPD4-220ENST00000491319 C10orf113Q5VZT2 155 aa11.01□□□□□ -0.65
SMPD4-220ENST00000491319 ZNF575Q86XF7 245 aa11.01□□□□□ -0.65
SMPD4-220ENST00000491319 TMEM263Q8WUH6 116 aaKnown RBP11.01□□□□□ -0.65
SMPD4-220ENST00000491319 TIMM8BQ9Y5J9 83 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-220ENST00000491319 TRAV6A0A075B6T7 132 aa11□□□□□ -0.65
SMPD4-220ENST00000491319 CBY3A6NI87 242 aa11□□□□□ -0.65
SMPD4-220ENST00000491319 FAM25EA8MYX2 175 aa11□□□□□ -0.65
SMPD4-220ENST00000491319 LYRM1O43325 122 aa11□□□□□ -0.65
SMPD4-220ENST00000491319 IGLC2P0DOY2 106 aa11□□□□□ -0.65
SMPD4-220ENST00000491319 ZNF846Q147U1 533 aa11□□□□□ -0.65
SMPD4-220ENST00000491319 CNPY1Q3B7I2 92 aa11□□□□□ -0.65
SMPD4-220ENST00000491319 ZNRF2Q8NHG8 242 aa11□□□□□ -0.65
SMPD4-220ENST00000491319 RNF141Q8WVD5 230 aa11□□□□□ -0.65
SMPD4-220ENST00000491319 SEC22CQ9BRL7 303 aa11□□□□□ -0.65
SMPD4-220ENST00000491319 NOP10Q9NPE3 64 aaKnown RBP11□□□□□ -0.65
SMPD4-220ENST00000491319 H3BQ15 152 aa10.99□□□□□ -0.65
SMPD4-220ENST00000491319 H7BYZ3 331 aa10.99□□□□□ -0.65
SMPD4-220ENST00000491319 CST7O76096 145 aa10.99□□□□□ -0.65
SMPD4-220ENST00000491319 CAMLGP49069 296 aa10.99□□□□□ -0.65
SMPD4-220ENST00000491319 BCAP31P51572 246 aa10.99□□□□□ -0.65
SMPD4-220ENST00000491319 CAV2P51636 162 aa10.99□□□□□ -0.65
SMPD4-220ENST00000491319 GFI1BQ5VTD9 330 aa10.99□□□□□ -0.65
SMPD4-220ENST00000491319 MIC13Q5XKP0 118 aa10.99□□□□□ -0.65
SMPD4-220ENST00000491319 ZNF493Q6ZR52 646 aa10.99□□□□□ -0.65
SMPD4-220ENST00000491319 NRARPQ7Z6K4 114 aa10.99□□□□□ -0.65
SMPD4-220ENST00000491319 OR10J6PQ8NGY7 276 aa10.99□□□□□ -0.65
SMPD4-220ENST00000491319 C11orf1Q9H5F2 150 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms