RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 CACNG7P62955 275 aa15.38■□□□□ 0.05
SNAPC3-206ENST00000490969 FAM169BQ8N8A8 192 aa15.38■□□□□ 0.05
SNAPC3-206ENST00000490969 OR4X2Q8NGF9 303 aa15.38■□□□□ 0.05
SNAPC3-206ENST00000490969 MBD3L4A6NDZ8 208 aaPredicted RBP15.37■□□□□ 0.05
SNAPC3-206ENST00000490969 MBD3L3A6NE82 208 aaPredicted RBP15.37■□□□□ 0.05
SNAPC3-206ENST00000490969 MBD3L5A6NJ08 208 aaPredicted RBP15.37■□□□□ 0.05
SNAPC3-206ENST00000490969 M0R1B8 84 aa15.37■□□□□ 0.05
SNAPC3-206ENST00000490969 HOXB4P17483 251 aaPredicted RBP15.37■□□□□ 0.05
SNAPC3-206ENST00000490969 RBPJQ06330 500 aa15.37■□□□□ 0.05
SNAPC3-206ENST00000490969 MBD3L2Q8NHZ7 208 aaPredicted RBP15.37■□□□□ 0.05
SNAPC3-206ENST00000490969 TPSG1Q9NRR2 321 aa15.37■□□□□ 0.05
SNAPC3-206ENST00000490969 DIAPH2-AS1Q14236 149 aa15.37■□□□□ 0.05
SNAPC3-206ENST00000490969 TMEM186Q96B77 213 aa15.37■□□□□ 0.05
SNAPC3-206ENST00000490969 IGHV3-21A0A0B4J1V1 117 aa15.36■□□□□ 0.05
SNAPC3-206ENST00000490969 LOC389332A0A1B0GUA5 103 aa15.36■□□□□ 0.05
SNAPC3-206ENST00000490969 SLC25A17O43808 307 aa15.36■□□□□ 0.05
SNAPC3-206ENST00000490969 GLRXP35754 106 aa15.36■□□□□ 0.05
SNAPC3-206ENST00000490969 TNFAIP6P98066 277 aaPredicted RBP15.36■□□□□ 0.05
SNAPC3-206ENST00000490969 SIGLEC8Q9NYZ4 499 aa15.36■□□□□ 0.05
SNAPC3-206ENST00000490969 PLP1P60201 277 aa15.36■□□□□ 0.05
SNAPC3-206ENST00000490969 PROCRQ9UNN8 238 aa15.36■□□□□ 0.05
SNAPC3-206ENST00000490969 HIGD1AQ9Y241 93 aa15.36■□□□□ 0.05
SNAPC3-206ENST00000490969 INSIG2Q9Y5U4 225 aa15.36■□□□□ 0.05
SNAPC3-206ENST00000490969 TRBV6-1A0A0K0K1D8 114 aa15.35■□□□□ 0.05
SNAPC3-206ENST00000490969 SMIM17P0DL12 118 aa15.35■□□□□ 0.05
SNAPC3-206ENST00000490969 CCL3L1P16619 93 aa15.35■□□□□ 0.05
SNAPC3-206ENST00000490969 CEACAM3P40198 252 aa15.35■□□□□ 0.05
SNAPC3-206ENST00000490969 LGALS7P47929 136 aa15.35■□□□□ 0.05
SNAPC3-206ENST00000490969 ZNF474Q6S9Z5 364 aaPredicted RBP15.35■□□□□ 0.05
SNAPC3-206ENST00000490969 TPPP3Q9BW30 176 aa15.35■□□□□ 0.05
SNAPC3-206ENST00000490969 KALRNO60229 2985 aa15.35■□□□□ 0.05
SNAPC3-206ENST00000490969 IGLV3-9A0A075B6K5 115 aa15.35■□□□□ 0.05
SNAPC3-206ENST00000490969 SH3BGRL2Q9UJC5 107 aa15.35■□□□□ 0.05
SNAPC3-206ENST00000490969 D6R8Y8 96 aa15.34■□□□□ 0.05
SNAPC3-206ENST00000490969 VMA21Q3ZAQ7 101 aa15.34■□□□□ 0.05
SNAPC3-206ENST00000490969 PVRIGQ6DKI7 326 aa15.34■□□□□ 0.05
SNAPC3-206ENST00000490969 ASCL2Q99929 193 aa15.34■□□□□ 0.05
SNAPC3-206ENST00000490969 IGHV1-46P01743 117 aa15.34■□□□□ 0.05
SNAPC3-206ENST00000490969 FABP2P12104 132 aa15.34■□□□□ 0.05
SNAPC3-206ENST00000490969 MRGPRG-AS1Q2M3A8 158 aa15.34■□□□□ 0.05
SNAPC3-206ENST00000490969 PRSS57Q6UWY2 283 aa15.34■□□□□ 0.05
SNAPC3-206ENST00000490969 C22orf34Q6ZV56 151 aa15.34■□□□□ 0.05
SNAPC3-206ENST00000490969 PCP2Q8IVA1 136 aa15.34■□□□□ 0.05
SNAPC3-206ENST00000490969 ROS1P08922 2347 aa15.34■□□□□ 0.05
SNAPC3-206ENST00000490969 TNFRSF1AP19438 455 aa15.33■□□□□ 0.04
SNAPC3-206ENST00000490969 LYZP61626 148 aa15.33■□□□□ 0.04
SNAPC3-206ENST00000490969 C1orf185Q5T7R7 199 aa15.33■□□□□ 0.04
SNAPC3-206ENST00000490969 ZNF493Q6ZR52 646 aa15.33■□□□□ 0.04
SNAPC3-206ENST00000490969 SVIPQ8NHG7 77 aa15.33■□□□□ 0.04
SNAPC3-206ENST00000490969 TMEM14CQ9P0S9 112 aa15.33■□□□□ 0.04
SNAPC3-206ENST00000490969 COL6A6A6NMZ7 2263 aa15.33■□□□□ 0.04
SNAPC3-206ENST00000490969 NMUP48645 174 aa15.33■□□□□ 0.04
SNAPC3-206ENST00000490969 SAMD13Q5VXD3 122 aa15.33■□□□□ 0.04
SNAPC3-206ENST00000490969 Q6AWC8 147 aa15.33■□□□□ 0.04
SNAPC3-206ENST00000490969 ZNF414Q96IQ9 312 aa15.33■□□□□ 0.04
SNAPC3-206ENST00000490969 RITA1Q96K30 269 aa15.33■□□□□ 0.04
SNAPC3-206ENST00000490969 SERTM2A0A1B0GWG4 89 aa15.32■□□□□ 0.04
SNAPC3-206ENST00000490969 APELAP0DMC3 54 aa15.32■□□□□ 0.04
SNAPC3-206ENST00000490969 FXYD7P58549 80 aa15.32■□□□□ 0.04
SNAPC3-206ENST00000490969 FAM57AQ8TBR7 257 aa15.32■□□□□ 0.04
SNAPC3-206ENST00000490969 PRELID3AQ96N28 172 aa15.32■□□□□ 0.04
SNAPC3-206ENST00000490969 SLC25A39Q9BZJ4 359 aaPredicted RBP15.32■□□□□ 0.04
SNAPC3-206ENST00000490969 ITPR1Q14643 2758 aa15.32■□□□□ 0.04
SNAPC3-206ENST00000490969 TMEM75Q8N9X5 138 aa15.32■□□□□ 0.04
SNAPC3-206ENST00000490969 PLCE1Q9P212 2302 aa15.31■□□□□ 0.04
SNAPC3-206ENST00000490969 HBDP02042 147 aa15.31■□□□□ 0.04
SNAPC3-206ENST00000490969 TEX36Q5VZQ5 186 aa15.31■□□□□ 0.04
SNAPC3-206ENST00000490969 F11RQ9Y624 299 aaKnown RBP15.31■□□□□ 0.04
SNAPC3-206ENST00000490969 U3KQK5 164 aa15.31■□□□□ 0.04
SNAPC3-206ENST00000490969 POLEQ07864 2286 aa15.31■□□□□ 0.04
SNAPC3-206ENST00000490969 CRIP1P50238 77 aa15.31■□□□□ 0.04
SNAPC3-206ENST00000490969 MEF2CQ06413 473 aaPredicted RBP15.31■□□□□ 0.04
SNAPC3-206ENST00000490969 SAMD5Q5TGI4 173 aa15.31■□□□□ 0.04
SNAPC3-206ENST00000490969 IFI27L1Q96BM0 104 aa15.3■□□□□ 0.04
SNAPC3-206ENST00000490969 PSG8Q9UQ74 426 aa15.3■□□□□ 0.04
SNAPC3-206ENST00000490969 PRB4P10163 310 aaPredicted RBP15.3■□□□□ 0.04
SNAPC3-206ENST00000490969 RPL24P83731 157 aaKnown RBP15.3■□□□□ 0.04
SNAPC3-206ENST00000490969 TM4SF20Q53R12 229 aa15.3■□□□□ 0.04
SNAPC3-206ENST00000490969 AMN1Q8IY45 258 aa15.3■□□□□ 0.04
SNAPC3-206ENST00000490969 SMIM13P0DJ93 91 aa15.29■□□□□ 0.04
SNAPC3-206ENST00000490969 PPIAL4GP0DN37 164 aa15.29■□□□□ 0.04
SNAPC3-206ENST00000490969 PAX8Q06710 450 aa15.29■□□□□ 0.04
SNAPC3-206ENST00000490969 TIMM23BQ5SRD1 257 aa15.29■□□□□ 0.04
SNAPC3-206ENST00000490969 FAM104BQ5XKR9 115 aa15.29■□□□□ 0.04
SNAPC3-206ENST00000490969 TMEM200BQ69YZ2 307 aa15.29■□□□□ 0.04
SNAPC3-206ENST00000490969 ORMDL3Q8N138 153 aa15.29■□□□□ 0.04
SNAPC3-206ENST00000490969 TMEM213A2RRL7 107 aa15.28■□□□□ 0.04
SNAPC3-206ENST00000490969 GNG7O60262 68 aa15.28■□□□□ 0.04
SNAPC3-206ENST00000490969 ABCA1O95477 2261 aa15.28■□□□□ 0.04
SNAPC3-206ENST00000490969 CACNA1AO00555 2505 aa15.28■□□□□ 0.04
SNAPC3-206ENST00000490969 TEX48A0A1B0GUV7 120 aa15.28■□□□□ 0.04
SNAPC3-206ENST00000490969 RPL27AP46776 148 aaKnown RBP15.28■□□□□ 0.04
SNAPC3-206ENST00000490969 FAM27E3Q08E93 113 aa15.28■□□□□ 0.04
SNAPC3-206ENST00000490969 TRBV19A0A075B6N1 114 aa15.27■□□□□ 0.04
SNAPC3-206ENST00000490969 K7EQM0 130 aa15.27■□□□□ 0.04
SNAPC3-206ENST00000490969 C17orf77Q96MU5 243 aa15.27■□□□□ 0.04
SNAPC3-206ENST00000490969 A0A0G2JNJ9 132 aa15.27■□□□□ 0.03
SNAPC3-206ENST00000490969 ENSAO43768 121 aaKnown RBP15.27■□□□□ 0.03
SNAPC3-206ENST00000490969 GOSR1O95249 250 aa15.27■□□□□ 0.03
SNAPC3-206ENST00000490969 PSG3Q16557 428 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms