RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 TSC22D2O75157 780 aa13.95□□□□□ -0.18
SREBF1-216ENST00000490796 CCNKO75909 580 aa13.95□□□□□ -0.18
SREBF1-216ENST00000490796 PRM2P04554 102 aa13.95□□□□□ -0.18
SREBF1-216ENST00000490796 HTN1P15515 57 aa13.95□□□□□ -0.18
SREBF1-216ENST00000490796 CXCL3P19876 107 aa13.95□□□□□ -0.18
SREBF1-216ENST00000490796 TSPOP30536 169 aa13.95□□□□□ -0.18
SREBF1-216ENST00000490796 TAS2R30P59541 319 aa13.95□□□□□ -0.18
SREBF1-216ENST00000490796 SLC38A11Q08AI6 406 aa13.95□□□□□ -0.18
SREBF1-216ENST00000490796 PXDC1Q5TGL8 231 aa13.95□□□□□ -0.18
SREBF1-216ENST00000490796 ZNF546Q86UE3 836 aa13.95□□□□□ -0.18
SREBF1-216ENST00000490796 F5H768 121 aa13.94□□□□□ -0.18
SREBF1-216ENST00000490796 ZNF701M0R085 212 aaPredicted RBP13.94□□□□□ -0.18
SREBF1-216ENST00000490796 ZBTB8BQ8NAP8 495 aaPredicted RBP13.94□□□□□ -0.18
SREBF1-216ENST00000490796 RPUSD4Q96CM3 377 aaKnown RBP13.94□□□□□ -0.18
SREBF1-216ENST00000490796 L7N2F9 121 aa13.93□□□□□ -0.18
SREBF1-216ENST00000490796 COX7A2P2O60397 106 aa13.93□□□□□ -0.18
SREBF1-216ENST00000490796 MED14OSP0DP75 135 aa13.93□□□□□ -0.18
SREBF1-216ENST00000490796 FAM3BP58499 235 aaPredicted RBP13.93□□□□□ -0.18
SREBF1-216ENST00000490796 TAS2R60P59551 318 aa13.93□□□□□ -0.18
SREBF1-216ENST00000490796 VAMP2P63027 116 aa13.93□□□□□ -0.18
SREBF1-216ENST00000490796 ZNF846Q147U1 533 aa13.93□□□□□ -0.18
SREBF1-216ENST00000490796 CNPY1Q3B7I2 92 aa13.93□□□□□ -0.18
SREBF1-216ENST00000490796 C1orf134Q5TEV5 83 aa13.93□□□□□ -0.18
SREBF1-216ENST00000490796 Q6ZR54 194 aa13.93□□□□□ -0.18
SREBF1-216ENST00000490796 RBM38Q9H0Z9 239 aaKnown RBP13.93□□□□□ -0.18
SREBF1-216ENST00000490796 PKHD1P08F94 4074 aa13.93□□□□□ -0.18
SREBF1-216ENST00000490796 K7EPK0 472 aa13.92□□□□□ -0.18
SREBF1-216ENST00000490796 NUDT3O95989 172 aa13.92□□□□□ -0.18
SREBF1-216ENST00000490796 ATP5G1P05496 136 aa13.92□□□□□ -0.18
SREBF1-216ENST00000490796 CXCL2P19875 107 aa13.92□□□□□ -0.18
SREBF1-216ENST00000490796 AZU1P20160 251 aa13.92□□□□□ -0.18
SREBF1-216ENST00000490796 ATP5G3P48201 142 aa13.92□□□□□ -0.18
SREBF1-216ENST00000490796 LCN15Q6UWW0 184 aa13.92□□□□□ -0.18
SREBF1-216ENST00000490796 LINC00305Q7Z4B0 112 aa13.92□□□□□ -0.18
SREBF1-216ENST00000490796 BPIFA4PQ86YQ2 179 aa13.92□□□□□ -0.18
SREBF1-216ENST00000490796 GGACTQ9BVM4 153 aa13.92□□□□□ -0.18
SREBF1-216ENST00000490796 AGPAT2O15120 278 aa13.91□□□□□ -0.18
SREBF1-216ENST00000490796 CDKN1BP46527 198 aa13.91□□□□□ -0.18
SREBF1-216ENST00000490796 FCN2Q15485 313 aa13.91□□□□□ -0.18
SREBF1-216ENST00000490796 PATE2Q6UY27 113 aa13.91□□□□□ -0.18
SREBF1-216ENST00000490796 MITD1Q8WV92 249 aa13.91□□□□□ -0.18
SREBF1-216ENST00000490796 C16orf74Q96GX8 76 aa13.91□□□□□ -0.18
SREBF1-216ENST00000490796 SLC50A1Q9BRV3 221 aa13.91□□□□□ -0.18
SREBF1-216ENST00000490796 BCAP31P51572 246 aa13.9□□□□□ -0.18
SREBF1-216ENST00000490796 RAB31Q13636 194 aa13.9□□□□□ -0.18
SREBF1-216ENST00000490796 OR10J6PQ8NGY7 276 aa13.9□□□□□ -0.18
SREBF1-216ENST00000490796 RCL1Q9Y2P8 373 aaKnown RBP13.9□□□□□ -0.18
SREBF1-216ENST00000490796 TIMM8BQ9Y5J9 83 aaPredicted RBP13.9□□□□□ -0.18
SREBF1-216ENST00000490796 CBY3A6NI87 242 aa13.89□□□□□ -0.19
SREBF1-216ENST00000490796 FAM25EA8MYX2 175 aa13.89□□□□□ -0.19
SREBF1-216ENST00000490796 MBPP02686 304 aaPredicted RBP13.89□□□□□ -0.19
SREBF1-216ENST00000490796 SNRPCP09234 159 aaKnown RBP13.89□□□□□ -0.19
SREBF1-216ENST00000490796 PRB4P10163 310 aaPredicted RBP13.89□□□□□ -0.19
SREBF1-216ENST00000490796 ZNF493Q6ZR52 646 aa13.89□□□□□ -0.19
SREBF1-216ENST00000490796 DNAH11Q96DT5 4516 aa13.88□□□□□ -0.19
SREBF1-216ENST00000490796 C7orf66A4D0T2 115 aa13.88□□□□□ -0.19
SREBF1-216ENST00000490796 IL7P13232 177 aa13.88□□□□□ -0.19
SREBF1-216ENST00000490796 BTCP35070 178 aa13.88□□□□□ -0.19
SREBF1-216ENST00000490796 CCL18P55774 89 aa13.88□□□□□ -0.19
SREBF1-216ENST00000490796 C10orf113Q5VZT2 155 aa13.88□□□□□ -0.19
SREBF1-216ENST00000490796 Q6ZRG5 221 aa13.88□□□□□ -0.19
SREBF1-216ENST00000490796 CCDC28AQ8IWP9 274 aa13.88□□□□□ -0.19
SREBF1-216ENST00000490796 ZNF331Q9NQX6 463 aaPredicted RBP13.88□□□□□ -0.19
SREBF1-216ENST00000490796 LSM5Q9Y4Y9 91 aaKnown RBP13.88□□□□□ -0.19
SREBF1-216ENST00000490796 H7BYZ3 331 aa13.87□□□□□ -0.19
SREBF1-216ENST00000490796 MRPS12O15235 138 aaKnown RBP13.87□□□□□ -0.19
SREBF1-216ENST00000490796 CAMLGP49069 296 aa13.87□□□□□ -0.19
SREBF1-216ENST00000490796 CAV2P51636 162 aa13.87□□□□□ -0.19
SREBF1-216ENST00000490796 ARL16Q0P5N6 197 aa13.87□□□□□ -0.19
SREBF1-216ENST00000490796 CLINT1Q14677 625 aa13.87□□□□□ -0.19
SREBF1-216ENST00000490796 TMEM263Q8WUH6 116 aaKnown RBP13.87□□□□□ -0.19
SREBF1-216ENST00000490796 SDHCQ99643 169 aaPredicted RBP13.87□□□□□ -0.19
SREBF1-216ENST00000490796 C20orf85Q9H1P6 137 aa13.87□□□□□ -0.19
SREBF1-216ENST00000490796 NOP10Q9NPE3 64 aaKnown RBP13.87□□□□□ -0.19
SREBF1-216ENST00000490796 PXMP4Q9Y6I8 212 aa13.87□□□□□ -0.19
SREBF1-216ENST00000490796 NACAE9PAV3 2078 aa13.87□□□□□ -0.19
SREBF1-216ENST00000490796 PLAC8L1A1L4L8 177 aa13.86□□□□□ -0.19
SREBF1-216ENST00000490796 C5orf51A6NDU8 294 aa13.86□□□□□ -0.19
SREBF1-216ENST00000490796 CCSO14618 274 aa13.86□□□□□ -0.19
SREBF1-216ENST00000490796 MGST2Q99735 147 aa13.86□□□□□ -0.19
SREBF1-216ENST00000490796 C20orf144Q9BQM9 153 aa13.86□□□□□ -0.19
SREBF1-216ENST00000490796 H3BTX0 84 aa13.85□□□□□ -0.19
SREBF1-216ENST00000490796 PVALBP20472 110 aaPredicted RBP13.85□□□□□ -0.19
SREBF1-216ENST00000490796 OR1L4Q8NGR5 311 aa13.85□□□□□ -0.19
SREBF1-216ENST00000490796 DNAJC4Q9NNZ3 241 aa13.85□□□□□ -0.19
SREBF1-216ENST00000490796 DYNC1H1Q14204 4646 aaKnown RBP13.84□□□□□ -0.19
SREBF1-216ENST00000490796 OPCMLQ14982 345 aa13.84□□□□□ -0.19
SREBF1-216ENST00000490796 NRARPQ7Z6K4 114 aa13.84□□□□□ -0.19
SREBF1-216ENST00000490796 TMEM37Q8WXS4 190 aa13.84□□□□□ -0.19
SREBF1-216ENST00000490796 UQCC1Q9NVA1 299 aa13.84□□□□□ -0.19
SREBF1-216ENST00000490796 PCLOQ9Y6V0 5065 aa13.83□□□□□ -0.2
SREBF1-216ENST00000490796 NBDYA0A0U1RRE5 68 aa13.83□□□□□ -0.2
SREBF1-216ENST00000490796 LYRM1O43325 122 aa13.83□□□□□ -0.2
SREBF1-216ENST00000490796 CST7O76096 145 aa13.83□□□□□ -0.2
SREBF1-216ENST00000490796 OR5I1Q13606 314 aa13.83□□□□□ -0.2
SREBF1-216ENST00000490796 GUK1Q16774 197 aa13.83□□□□□ -0.2
SREBF1-216ENST00000490796 RNASE8Q8TDE3 154 aaKnown RBP13.83□□□□□ -0.2
SREBF1-216ENST00000490796 PFDN5Q99471 154 aa13.83□□□□□ -0.2
SREBF1-216ENST00000490796 PKD1P98161 4303 aa13.83□□□□□ -0.2
SREBF1-216ENST00000490796 MUC4Q99102 2169 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms