RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 IL36BQ9NZH7 164 aa9.07□□□□□ -0.96
TRIM40-208ENST00000489892 MRPL36Q9P0J6 103 aaKnown RBP9.07□□□□□ -0.96
TRIM40-208ENST00000489892 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.06□□□□□ -0.96
TRIM40-208ENST00000489892 SCO2A0A1W2PP80 73 aa9.06□□□□□ -0.96
TRIM40-208ENST00000489892 XKRY2A2RUG3 117 aa9.06□□□□□ -0.96
TRIM40-208ENST00000489892 OR2T8A6NH00 312 aa9.06□□□□□ -0.96
TRIM40-208ENST00000489892 BMPR1BO00238 502 aa9.06□□□□□ -0.96
TRIM40-208ENST00000489892 MT-ND6P03923 174 aa9.06□□□□□ -0.96
TRIM40-208ENST00000489892 CLEC3BP05452 202 aa9.06□□□□□ -0.96
TRIM40-208ENST00000489892 PSG1P11464 419 aa9.06□□□□□ -0.96
TRIM40-208ENST00000489892 GPR183P32249 361 aa9.06□□□□□ -0.96
TRIM40-208ENST00000489892 TAS2R60P59551 318 aa9.06□□□□□ -0.96
TRIM40-208ENST00000489892 ZNF90Q03938 601 aa9.06□□□□□ -0.96
TRIM40-208ENST00000489892 TIGITQ495A1 244 aa9.06□□□□□ -0.96
TRIM40-208ENST00000489892 Q6ZS46 218 aa9.06□□□□□ -0.96
TRIM40-208ENST00000489892 HIST1H2BLQ99880 126 aa9.06□□□□□ -0.96
TRIM40-208ENST00000489892 CHRDL1Q9BU40 450 aa9.06□□□□□ -0.96
TRIM40-208ENST00000489892 GPR61Q9BZJ8 451 aa9.06□□□□□ -0.96
TRIM40-208ENST00000489892 ESM1Q9NQ30 184 aa9.06□□□□□ -0.96
TRIM40-208ENST00000489892 SERTAD4Q9NUC0 356 aa9.06□□□□□ -0.96
TRIM40-208ENST00000489892 HIGD1AQ9Y241 93 aa9.06□□□□□ -0.96
TRIM40-208ENST00000489892 SVEP1Q4LDE5 3571 aa9.06□□□□□ -0.96
TRIM40-208ENST00000489892 A0A1B0GUS0 222 aa9.05□□□□□ -0.96
TRIM40-208ENST00000489892 TSTD3H0UI37 97 aa9.05□□□□□ -0.96
TRIM40-208ENST00000489892 CTSGP08311 255 aa9.05□□□□□ -0.96
TRIM40-208ENST00000489892 FABP4P15090 132 aa9.05□□□□□ -0.96
TRIM40-208ENST00000489892 LYZP61626 148 aa9.05□□□□□ -0.96
TRIM40-208ENST00000489892 PKIAP61925 76 aa9.05□□□□□ -0.96
TRIM40-208ENST00000489892 JOSD1Q15040 202 aaPredicted RBP9.05□□□□□ -0.96
TRIM40-208ENST00000489892 RPEL1Q2QD12 228 aa9.05□□□□□ -0.96
TRIM40-208ENST00000489892 TMEM95Q3KNT9 176 aa9.05□□□□□ -0.96
TRIM40-208ENST00000489892 WDR73Q6P4I2 378 aa9.05□□□□□ -0.96
TRIM40-208ENST00000489892 CLEC19AQ6UXS0 136 aa9.05□□□□□ -0.96
TRIM40-208ENST00000489892 Q6ZSV7 163 aa9.05□□□□□ -0.96
TRIM40-208ENST00000489892 KLHDC1Q8N7A1 406 aa9.05□□□□□ -0.96
TRIM40-208ENST00000489892 OR1B1Q8NGR6 318 aa9.05□□□□□ -0.96
TRIM40-208ENST00000489892 RNF125Q96EQ8 232 aa9.05□□□□□ -0.96
TRIM40-208ENST00000489892 SMIM12Q96EX1 92 aa9.05□□□□□ -0.96
TRIM40-208ENST00000489892 UBE2E2Q96LR5 201 aa9.05□□□□□ -0.96
TRIM40-208ENST00000489892 GNB4Q9HAV0 340 aa9.05□□□□□ -0.96
TRIM40-208ENST00000489892 SEPSECSQ9HD40 501 aaKnown RBP9.05□□□□□ -0.96
TRIM40-208ENST00000489892 OSTCQ9NRP0 149 aa9.05□□□□□ -0.96
TRIM40-208ENST00000489892 YTHDF2Q9Y5A9 579 aaKnown RBP9.05□□□□□ -0.96
TRIM40-208ENST00000489892 TRAPPC1Q9Y5R8 145 aa9.05□□□□□ -0.96
TRIM40-208ENST00000489892 ZNF320A2RRD8 509 aa9.04□□□□□ -0.96
TRIM40-208ENST00000489892 F8W735 103 aaPredicted RBP9.04□□□□□ -0.96
TRIM40-208ENST00000489892 IL4P05112 153 aa9.04□□□□□ -0.96
TRIM40-208ENST00000489892 ORM2P19652 201 aa9.04□□□□□ -0.96
TRIM40-208ENST00000489892 ARL3P36405 182 aa9.04□□□□□ -0.96
TRIM40-208ENST00000489892 GNG4P50150 75 aa9.04□□□□□ -0.96
TRIM40-208ENST00000489892 KRTAP24-1Q3LI83 254 aa9.04□□□□□ -0.96
TRIM40-208ENST00000489892 ZNF329Q86UD4 541 aa9.04□□□□□ -0.96
TRIM40-208ENST00000489892 MYOZ3Q8TDC0 251 aa9.04□□□□□ -0.96
TRIM40-208ENST00000489892 CCDC140Q96MF4 163 aa9.04□□□□□ -0.96
TRIM40-208ENST00000489892 ELOVL1Q9BW60 279 aa9.04□□□□□ -0.96
TRIM40-208ENST00000489892 WI2-2373I1.2A0A1W2PRP0 233 aa9.03□□□□□ -0.96
TRIM40-208ENST00000489892 LINC00587B1AMM8 73 aa9.03□□□□□ -0.96
TRIM40-208ENST00000489892 NDUFA4O00483 81 aa9.03□□□□□ -0.96
TRIM40-208ENST00000489892 OR7C2O60412 319 aa9.03□□□□□ -0.96
TRIM40-208ENST00000489892 LGALS1P09382 135 aaKnown RBP9.03□□□□□ -0.96
TRIM40-208ENST00000489892 GATA2P23769 480 aaPredicted RBP9.03□□□□□ -0.96
TRIM40-208ENST00000489892 BMI1P35226 326 aa9.03□□□□□ -0.96
TRIM40-208ENST00000489892 MIR17HGQ75NE6 70 aa9.03□□□□□ -0.96
TRIM40-208ENST00000489892 LINC00305Q7Z4B0 112 aa9.03□□□□□ -0.96
TRIM40-208ENST00000489892 ZNF491Q8N8L2 437 aa9.03□□□□□ -0.96
TRIM40-208ENST00000489892 PEF1Q9UBV8 284 aaKnown RBP9.03□□□□□ -0.96
TRIM40-208ENST00000489892 RABAC1Q9UI14 185 aa9.03□□□□□ -0.96
TRIM40-208ENST00000489892 S4R3C0 116 aa9.03□□□□□ -0.96
TRIM40-208ENST00000489892 TRBV20OR9-2A0A075B6H5 130 aa9.02□□□□□ -0.97
TRIM40-208ENST00000489892 HELTA6NFD8 242 aa9.02□□□□□ -0.97
TRIM40-208ENST00000489892 ISLRO14498 428 aa9.02□□□□□ -0.97
TRIM40-208ENST00000489892 IGHV3-23P01764 117 aa9.02□□□□□ -0.97
TRIM40-208ENST00000489892 AMBPP02760 352 aa9.02□□□□□ -0.97
TRIM40-208ENST00000489892 FAM106AQ4KMX7 169 aa9.02□□□□□ -0.97
TRIM40-208ENST00000489892 SPATA31B1PQ5VZV4 182 aa9.02□□□□□ -0.97
TRIM40-208ENST00000489892 RASL11AQ6T310 242 aa9.02□□□□□ -0.97
TRIM40-208ENST00000489892 OR5AU1Q8NGC0 362 aa9.02□□□□□ -0.97
TRIM40-208ENST00000489892 OCC1Q8TAD7 63 aa9.02□□□□□ -0.97
TRIM40-208ENST00000489892 TMEM37Q8WXS4 190 aa9.02□□□□□ -0.97
TRIM40-208ENST00000489892 GPR82Q96P67 336 aa9.02□□□□□ -0.97
TRIM40-208ENST00000489892 METTL26Q96S19 204 aa9.02□□□□□ -0.97
TRIM40-208ENST00000489892 DERL1Q9BUN8 251 aa9.02□□□□□ -0.97
TRIM40-208ENST00000489892 KLK15Q9H2R5 256 aa9.02□□□□□ -0.97
TRIM40-208ENST00000489892 MRPL27Q9P0M9 148 aaKnown RBP9.02□□□□□ -0.97
TRIM40-208ENST00000489892 CLPSL1A2RUU4 121 aa9.01□□□□□ -0.97
TRIM40-208ENST00000489892 ESDP10768 282 aa9.01□□□□□ -0.97
TRIM40-208ENST00000489892 ADMP35318 185 aa9.01□□□□□ -0.97
TRIM40-208ENST00000489892 RANP62826 216 aaKnown RBP9.01□□□□□ -0.97
TRIM40-208ENST00000489892 UBE2L3P68036 154 aaKnown RBP9.01□□□□□ -0.97
TRIM40-208ENST00000489892 PAFAH1B2P68402 229 aa9.01□□□□□ -0.97
TRIM40-208ENST00000489892 IQCJQ1A5X6 159 aa9.01□□□□□ -0.97
TRIM40-208ENST00000489892 LBHQ53QV2 105 aaPredicted RBP9.01□□□□□ -0.97
TRIM40-208ENST00000489892 CENPWQ5EE01 88 aa9.01□□□□□ -0.97
TRIM40-208ENST00000489892 GFI1BQ5VTD9 330 aa9.01□□□□□ -0.97
TRIM40-208ENST00000489892 FAM231DQ6ZW35 169 aa9.01□□□□□ -0.97
TRIM40-208ENST00000489892 GBGT1Q8N5D6 347 aa9.01□□□□□ -0.97
TRIM40-208ENST00000489892 GRAMD2BQ96HH9 432 aa9.01□□□□□ -0.97
TRIM40-208ENST00000489892 SHANK2-AS3Q9BTD1 123 aa9.01□□□□□ -0.97
TRIM40-208ENST00000489892 GNB1LQ9BYB4 327 aa9.01□□□□□ -0.97
TRIM40-208ENST00000489892 TMEM14CQ9P0S9 112 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms