RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 IGHV4-28A0A0C4DH34 117 aa13.85□□□□□ -0.19
EPHB4-207ENST00000489808 PET100P0DJ07 73 aa13.85□□□□□ -0.19
EPHB4-207ENST00000489808 RBMY1A1P0DJD3 496 aaKnown RBP13.85□□□□□ -0.19
EPHB4-207ENST00000489808 RBMY1CP0DJD4 496 aa13.85□□□□□ -0.19
EPHB4-207ENST00000489808 CXCL3P19876 107 aa13.85□□□□□ -0.19
EPHB4-207ENST00000489808 CLINT1Q14677 625 aa13.85□□□□□ -0.19
EPHB4-207ENST00000489808 RBMY1FQ15415 496 aaKnown RBP13.85□□□□□ -0.19
EPHB4-207ENST00000489808 C11orf45Q8TAV5 145 aa13.85□□□□□ -0.19
EPHB4-207ENST00000489808 NPCDR1Q9BY65 106 aa13.85□□□□□ -0.19
EPHB4-207ENST00000489808 TRAV5A0A0B4J249 113 aa13.84□□□□□ -0.19
EPHB4-207ENST00000489808 LCE6AA0A183 80 aa13.84□□□□□ -0.19
EPHB4-207ENST00000489808 A8MTW9 85 aa13.84□□□□□ -0.19
EPHB4-207ENST00000489808 DUSP14O95147 198 aaKnown RBP13.84□□□□□ -0.19
EPHB4-207ENST00000489808 SNRPCP09234 159 aaKnown RBP13.84□□□□□ -0.19
EPHB4-207ENST00000489808 HLA-DMBP28068 263 aa13.84□□□□□ -0.19
EPHB4-207ENST00000489808 PSG3Q16557 428 aa13.84□□□□□ -0.19
EPHB4-207ENST00000489808 CEMP1Q6PRD7 247 aaPredicted RBP13.84□□□□□ -0.19
EPHB4-207ENST00000489808 THAP6Q8TBB0 222 aa13.84□□□□□ -0.19
EPHB4-207ENST00000489808 SLC35B3Q9H1N7 401 aa13.84□□□□□ -0.19
EPHB4-207ENST00000489808 RYR2Q92736 4967 aa13.83□□□□□ -0.19
EPHB4-207ENST00000489808 CXCL2P19875 107 aa13.83□□□□□ -0.2
EPHB4-207ENST00000489808 ZNF705AQ6ZN79 300 aaPredicted RBP13.83□□□□□ -0.2
EPHB4-207ENST00000489808 ZNF738Q8NE65 137 aa13.83□□□□□ -0.2
EPHB4-207ENST00000489808 HRH4Q9H3N8 390 aa13.83□□□□□ -0.2
EPHB4-207ENST00000489808 ZNF331Q9NQX6 463 aaPredicted RBP13.83□□□□□ -0.2
EPHB4-207ENST00000489808 NUPR2A6NF83 97 aa13.82□□□□□ -0.2
EPHB4-207ENST00000489808 ZNF705DP0CH99 300 aaPredicted RBP13.82□□□□□ -0.2
EPHB4-207ENST00000489808 ZNF705BP0CI00 300 aaPredicted RBP13.82□□□□□ -0.2
EPHB4-207ENST00000489808 IGLC2P0DOY2 106 aa13.82□□□□□ -0.2
EPHB4-207ENST00000489808 RPL12P30050 165 aaKnown RBP13.82□□□□□ -0.2
EPHB4-207ENST00000489808 CNN1P51911 297 aaKnown RBP13.82□□□□□ -0.2
EPHB4-207ENST00000489808 NANOS2P60321 138 aaKnown RBP13.82□□□□□ -0.2
EPHB4-207ENST00000489808 LCN15Q6UWW0 184 aa13.82□□□□□ -0.2
EPHB4-207ENST00000489808 AMTNQ6UX39 209 aa13.82□□□□□ -0.2
EPHB4-207ENST00000489808 WDR61Q9GZS3 305 aaKnown RBP13.82□□□□□ -0.2
EPHB4-207ENST00000489808 MFFQ9GZY8 342 aa13.82□□□□□ -0.2
EPHB4-207ENST00000489808 MBD2Q9UBB5 411 aa13.82□□□□□ -0.2
EPHB4-207ENST00000489808 HSPB11Q9Y547 144 aa13.82□□□□□ -0.2
EPHB4-207ENST00000489808 LYSTQ99698 3801 aa13.81□□□□□ -0.2
EPHB4-207ENST00000489808 H3BQ15 152 aa13.81□□□□□ -0.2
EPHB4-207ENST00000489808 FCN2Q15485 313 aa13.81□□□□□ -0.2
EPHB4-207ENST00000489808 GCSAMLQ5JQS6 135 aa13.81□□□□□ -0.2
EPHB4-207ENST00000489808 OR8A1Q8NGG7 326 aa13.81□□□□□ -0.2
EPHB4-207ENST00000489808 PHLDA1Q8WV24 401 aaPredicted RBP13.81□□□□□ -0.2
EPHB4-207ENST00000489808 SAT2Q96F10 170 aaPredicted RBP13.81□□□□□ -0.2
EPHB4-207ENST00000489808 NEU1Q99519 415 aa13.81□□□□□ -0.2
EPHB4-207ENST00000489808 ATP5SQ99766 215 aa13.81□□□□□ -0.2
EPHB4-207ENST00000489808 SLC50A1Q9BRV3 221 aa13.81□□□□□ -0.2
EPHB4-207ENST00000489808 MED28Q9H204 178 aa13.81□□□□□ -0.2
EPHB4-207ENST00000489808 DNAH1Q9P2D7 4330 aa13.81□□□□□ -0.2
EPHB4-207ENST00000489808 ZNF705FA8MVS1 300 aaPredicted RBP13.8□□□□□ -0.2
EPHB4-207ENST00000489808 H3BTX0 84 aa13.8□□□□□ -0.2
EPHB4-207ENST00000489808 OR11H7Q8NGC8 314 aa13.8□□□□□ -0.2
EPHB4-207ENST00000489808 RPUSD4Q96CM3 377 aaKnown RBP13.8□□□□□ -0.2
EPHB4-207ENST00000489808 SMIM9A6NGZ8 99 aa13.79□□□□□ -0.2
EPHB4-207ENST00000489808 GUK1Q16774 197 aa13.79□□□□□ -0.2
EPHB4-207ENST00000489808 C1orf158Q8N1D5 194 aa13.79□□□□□ -0.2
EPHB4-207ENST00000489808 TMEM14CQ9P0S9 112 aa13.79□□□□□ -0.2
EPHB4-207ENST00000489808 KLK5Q9Y337 293 aaPredicted RBP13.79□□□□□ -0.2
EPHB4-207ENST00000489808 IGHV3OR16-12A0A075B7B8 117 aa13.78□□□□□ -0.2
EPHB4-207ENST00000489808 SLC17A3O00476 420 aa13.78□□□□□ -0.2
EPHB4-207ENST00000489808 JTBO76095 146 aa13.78□□□□□ -0.2
EPHB4-207ENST00000489808 AMBPP02760 352 aa13.78□□□□□ -0.2
EPHB4-207ENST00000489808 HIST1H1AQ02539 215 aaPredicted RBP13.78□□□□□ -0.2
EPHB4-207ENST00000489808 SMIM3Q9BZL3 60 aa13.78□□□□□ -0.2
EPHB4-207ENST00000489808 ZNF586Q9NXT0 402 aa13.78□□□□□ -0.2
EPHB4-207ENST00000489808 GOLT1BQ9Y3E0 138 aa13.78□□□□□ -0.2
EPHB4-207ENST00000489808 C17orf112F2Z3M2 114 aa13.77□□□□□ -0.21
EPHB4-207ENST00000489808 RGS21Q2M5E4 152 aa13.77□□□□□ -0.21
EPHB4-207ENST00000489808 IGF2BP2-AS1Q96M15 143 aa13.77□□□□□ -0.21
EPHB4-207ENST00000489808 KCNIP2Q9NS61 270 aa13.77□□□□□ -0.21
EPHB4-207ENST00000489808 M0R2Z0 102 aa13.76□□□□□ -0.21
EPHB4-207ENST00000489808 CRXO43186 299 aaPredicted RBP13.76□□□□□ -0.21
EPHB4-207ENST00000489808 IFNA5P01569 189 aa13.76□□□□□ -0.21
EPHB4-207ENST00000489808 PRB4P10163 310 aaPredicted RBP13.76□□□□□ -0.21
EPHB4-207ENST00000489808 HIST1H1EP10412 219 aaKnown RBP13.76□□□□□ -0.21
EPHB4-207ENST00000489808 RHOBP62745 196 aa13.76□□□□□ -0.21
EPHB4-207ENST00000489808 SPINK13Q1W4C9 94 aa13.76□□□□□ -0.21
EPHB4-207ENST00000489808 SCGB1C1Q8TD33 95 aa13.76□□□□□ -0.21
EPHB4-207ENST00000489808 WFDC1Q9HC57 220 aa13.76□□□□□ -0.21
EPHB4-207ENST00000489808 TRBV19A0A075B6N1 114 aa13.75□□□□□ -0.21
EPHB4-207ENST00000489808 ZNF253O75346 499 aa13.75□□□□□ -0.21
EPHB4-207ENST00000489808 MIR17HGQ75NE6 70 aa13.75□□□□□ -0.21
EPHB4-207ENST00000489808 FAM167A-AS1Q96KT0 104 aa13.75□□□□□ -0.21
EPHB4-207ENST00000489808 SLC25A2Q9BXI2 301 aa13.75□□□□□ -0.21
EPHB4-207ENST00000489808 PRAC2D3DTV9 90 aa13.74□□□□□ -0.21
EPHB4-207ENST00000489808 BOLA2-SMG1P6H3BVE0 249 aa13.74□□□□□ -0.21
EPHB4-207ENST00000489808 PYYP10082 97 aa13.74□□□□□ -0.21
EPHB4-207ENST00000489808 OXA1LQ15070 435 aa13.74□□□□□ -0.21
EPHB4-207ENST00000489808 PARD6GQ9BYG4 376 aaPredicted RBP13.74□□□□□ -0.21
EPHB4-207ENST00000489808 PPP1R14DQ9NXH3 145 aa13.74□□□□□ -0.21
EPHB4-207ENST00000489808 RFNGQ9Y644 331 aa13.74□□□□□ -0.21
EPHB4-207ENST00000489808 ALMS1Q8TCU4 4167 aa13.73□□□□□ -0.21
EPHB4-207ENST00000489808 TMEM189A5PLL7 270 aa13.73□□□□□ -0.21
EPHB4-207ENST00000489808 NDUFB4O95168 129 aa13.73□□□□□ -0.21
EPHB4-207ENST00000489808 GIPP09681 153 aaPredicted RBP13.73□□□□□ -0.21
EPHB4-207ENST00000489808 C12orf74Q32Q52 190 aa13.73□□□□□ -0.21
EPHB4-207ENST00000489808 Q5BKY6 102 aa13.73□□□□□ -0.21
EPHB4-207ENST00000489808 ASB13Q8WXK3 278 aa13.73□□□□□ -0.21
EPHB4-207ENST00000489808 MRPL32Q9BYC8 188 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 163.1 ms