RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 TSPOP30536 169 aa9.38□□□□□ -0.91
LINC00173-204ENST00000489452 ATP5G3P48201 142 aa9.38□□□□□ -0.91
LINC00173-204ENST00000489452 INPP1P49441 399 aa9.38□□□□□ -0.91
LINC00173-204ENST00000489452 SELENOTP62341 195 aa9.38□□□□□ -0.91
LINC00173-204ENST00000489452 RPUSD4Q96CM3 377 aaKnown RBP9.38□□□□□ -0.91
LINC00173-204ENST00000489452 SMIM8Q96KF7 97 aa9.38□□□□□ -0.91
LINC00173-204ENST00000489452 NPVFQ9HCQ7 196 aa9.38□□□□□ -0.91
LINC00173-204ENST00000489452 NOP10Q9NPE3 64 aaKnown RBP9.38□□□□□ -0.91
LINC00173-204ENST00000489452 GSKIPQ9P0R6 139 aa9.38□□□□□ -0.91
LINC00173-204ENST00000489452 NBDYA0A0U1RRE5 68 aa9.37□□□□□ -0.91
LINC00173-204ENST00000489452 H3BTX0 84 aa9.37□□□□□ -0.91
LINC00173-204ENST00000489452 CCL18P55774 89 aa9.37□□□□□ -0.91
LINC00173-204ENST00000489452 FAM3BP58499 235 aaPredicted RBP9.37□□□□□ -0.91
LINC00173-204ENST00000489452 TAS2R60P59551 318 aa9.37□□□□□ -0.91
LINC00173-204ENST00000489452 PLP1P60201 277 aa9.37□□□□□ -0.91
LINC00173-204ENST00000489452 UBE2MP61081 183 aaKnown RBP9.37□□□□□ -0.91
LINC00173-204ENST00000489452 SLC38A11Q08AI6 406 aa9.37□□□□□ -0.91
LINC00173-204ENST00000489452 KIR3DS1Q14943 382 aa9.37□□□□□ -0.91
LINC00173-204ENST00000489452 CCDC190Q86UF4 302 aa9.37□□□□□ -0.91
LINC00173-204ENST00000489452 ZNRF2Q8NHG8 242 aa9.37□□□□□ -0.91
LINC00173-204ENST00000489452 TIMM8BQ9Y5J9 83 aaPredicted RBP9.37□□□□□ -0.91
LINC00173-204ENST00000489452 A0A087X0K7 114 aa9.36□□□□□ -0.91
LINC00173-204ENST00000489452 C16orf90A8MZG2 172 aa9.36□□□□□ -0.91
LINC00173-204ENST00000489452 GOSR2O14653 212 aa9.36□□□□□ -0.91
LINC00173-204ENST00000489452 DLK1P80370 383 aa9.36□□□□□ -0.91
LINC00173-204ENST00000489452 OR5I1Q13606 314 aa9.36□□□□□ -0.91
LINC00173-204ENST00000489452 CLINT1Q14677 625 aa9.36□□□□□ -0.91
LINC00173-204ENST00000489452 C4orf46Q504U0 113 aa9.36□□□□□ -0.91
LINC00173-204ENST00000489452 S100A7AQ86SG5 101 aa9.36□□□□□ -0.91
LINC00173-204ENST00000489452 TMEM256Q8N2U0 113 aa9.36□□□□□ -0.91
LINC00173-204ENST00000489452 C6orf223Q8N319 242 aa9.36□□□□□ -0.91
LINC00173-204ENST00000489452 OR10P1Q8NGE3 313 aa9.36□□□□□ -0.91
LINC00173-204ENST00000489452 RNF141Q8WVD5 230 aa9.36□□□□□ -0.91
LINC00173-204ENST00000489452 DEDD2Q8WXF8 326 aa9.36□□□□□ -0.91
LINC00173-204ENST00000489452 PARD6GQ9BYG4 376 aaPredicted RBP9.36□□□□□ -0.91
LINC00173-204ENST00000489452 ARV1Q9H2C2 271 aa9.36□□□□□ -0.91
LINC00173-204ENST00000489452 MGAT4CQ9UBM8 478 aa9.36□□□□□ -0.91
LINC00173-204ENST00000489452 LINC00588Q9Y4M8 146 aa9.36□□□□□ -0.91
LINC00173-204ENST00000489452 PRAC2D3DTV9 90 aa9.35□□□□□ -0.91
LINC00173-204ENST00000489452 J3KRW8 73 aa9.35□□□□□ -0.91
LINC00173-204ENST00000489452 NDUFB6O95139 128 aa9.35□□□□□ -0.91
LINC00173-204ENST00000489452 OR4E1P0C645 316 aa9.35□□□□□ -0.91
LINC00173-204ENST00000489452 ARL16Q0P5N6 197 aa9.35□□□□□ -0.91
LINC00173-204ENST00000489452 BAK1Q16611 211 aa9.35□□□□□ -0.91
LINC00173-204ENST00000489452 IAH1Q2TAA2 248 aaPredicted RBP9.35□□□□□ -0.91
LINC00173-204ENST00000489452 SPANXN2Q5MJ10 180 aa9.35□□□□□ -0.91
LINC00173-204ENST00000489452 LCE2DQ5TA82 110 aaPredicted RBP9.35□□□□□ -0.91
LINC00173-204ENST00000489452 TEPPQ6URK8 271 aa9.35□□□□□ -0.91
LINC00173-204ENST00000489452 TMEM14EPQ6UXP3 125 aa9.35□□□□□ -0.91
LINC00173-204ENST00000489452 LINC00305Q7Z4B0 112 aa9.35□□□□□ -0.91
LINC00173-204ENST00000489452 C16orf74Q96GX8 76 aa9.35□□□□□ -0.91
LINC00173-204ENST00000489452 DNAH5Q8TE73 4624 aa9.35□□□□□ -0.91
LINC00173-204ENST00000489452 AGPAT2O15120 278 aa9.34□□□□□ -0.91
LINC00173-204ENST00000489452 MRPS12O15235 138 aaKnown RBP9.34□□□□□ -0.91
LINC00173-204ENST00000489452 CDKN1BP46527 198 aa9.34□□□□□ -0.91
LINC00173-204ENST00000489452 TRIQKQ629K1 86 aa9.34□□□□□ -0.91
LINC00173-204ENST00000489452 SSX7Q7RTT5 188 aa9.34□□□□□ -0.91
LINC00173-204ENST00000489452 SRRQ9GZT4 340 aa9.34□□□□□ -0.91
LINC00173-204ENST00000489452 ZNF331Q9NQX6 463 aaPredicted RBP9.34□□□□□ -0.91
LINC00173-204ENST00000489452 TRAV26-1A0A087WT03 109 aa9.33□□□□□ -0.92
LINC00173-204ENST00000489452 A0A0J9YY99 117 aa9.33□□□□□ -0.92
LINC00173-204ENST00000489452 NAP1L6A6NFF2 107 aa9.33□□□□□ -0.92
LINC00173-204ENST00000489452 H7BYZ3 331 aa9.33□□□□□ -0.92
LINC00173-204ENST00000489452 COX7A2P2O60397 106 aa9.33□□□□□ -0.92
LINC00173-204ENST00000489452 LCN15Q6UWW0 184 aa9.33□□□□□ -0.92
LINC00173-204ENST00000489452 ZNF493Q6ZR52 646 aa9.33□□□□□ -0.92
LINC00173-204ENST00000489452 CCDC28AQ8IWP9 274 aa9.33□□□□□ -0.92
LINC00173-204ENST00000489452 ZBTB8BQ8NAP8 495 aaPredicted RBP9.33□□□□□ -0.92
LINC00173-204ENST00000489452 OR10J6PQ8NGY7 276 aa9.33□□□□□ -0.92
LINC00173-204ENST00000489452 GAGE12BA1L429 117 aa9.32□□□□□ -0.92
LINC00173-204ENST00000489452 FNDC10F2Z333 226 aa9.32□□□□□ -0.92
LINC00173-204ENST00000489452 K7EPK0 472 aa9.32□□□□□ -0.92
LINC00173-204ENST00000489452 SLC17A3O00476 420 aa9.32□□□□□ -0.92
LINC00173-204ENST00000489452 GAGE7O76087 117 aa9.32□□□□□ -0.92
LINC00173-204ENST00000489452 GAGE12FP0CL80 117 aa9.32□□□□□ -0.92
LINC00173-204ENST00000489452 GAGE12GP0CL81 117 aa9.32□□□□□ -0.92
LINC00173-204ENST00000489452 GAGE12IP0CL82 117 aa9.32□□□□□ -0.92
LINC00173-204ENST00000489452 MORN5Q5VZ52 161 aa9.32□□□□□ -0.92
LINC00173-204ENST00000489452 ZNF546Q86UE3 836 aa9.32□□□□□ -0.92
LINC00173-204ENST00000489452 BPIFA4PQ86YQ2 179 aa9.32□□□□□ -0.92
LINC00173-204ENST00000489452 RNASE8Q8TDE3 154 aaKnown RBP9.32□□□□□ -0.92
LINC00173-204ENST00000489452 TMEM263Q8WUH6 116 aaKnown RBP9.32□□□□□ -0.92
LINC00173-204ENST00000489452 TMEM37Q8WXS4 190 aa9.32□□□□□ -0.92
LINC00173-204ENST00000489452 GNPNAT1Q96EK6 184 aaPredicted RBP9.32□□□□□ -0.92
LINC00173-204ENST00000489452 Q9H8V8 135 aa9.32□□□□□ -0.92
LINC00173-204ENST00000489452 RCL1Q9Y2P8 373 aaKnown RBP9.32□□□□□ -0.92
LINC00173-204ENST00000489452 TRAV5A0A0B4J249 113 aa9.31□□□□□ -0.92
LINC00173-204ENST00000489452 TRAV12-3A0A0B4J271 114 aa9.31□□□□□ -0.92
LINC00173-204ENST00000489452 C7orf66A4D0T2 115 aa9.31□□□□□ -0.92
LINC00173-204ENST00000489452 H3BQ15 152 aa9.31□□□□□ -0.92
LINC00173-204ENST00000489452 TSC22D2O75157 780 aa9.31□□□□□ -0.92
LINC00173-204ENST00000489452 MBPP02686 304 aaPredicted RBP9.31□□□□□ -0.92
LINC00173-204ENST00000489452 TAS2R30P59541 319 aa9.31□□□□□ -0.92
LINC00173-204ENST00000489452 OPCMLQ14982 345 aa9.31□□□□□ -0.92
LINC00173-204ENST00000489452 PXDC1Q5TGL8 231 aa9.31□□□□□ -0.92
LINC00173-204ENST00000489452 GFI1BQ5VTD9 330 aa9.31□□□□□ -0.92
LINC00173-204ENST00000489452 C10orf113Q5VZT2 155 aa9.31□□□□□ -0.92
LINC00173-204ENST00000489452 MGST2Q99735 147 aa9.31□□□□□ -0.92
LINC00173-204ENST00000489452 SLC50A1Q9BRV3 221 aa9.31□□□□□ -0.92
LINC00173-204ENST00000489452 RNF24Q9Y225 148 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms