RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 ATP5SQ99766 215 aa11.47□□□□□ -0.57
LMX1A-204ENST00000489443 C1QTNF4Q9BXJ3 329 aa11.47□□□□□ -0.57
LMX1A-204ENST00000489443 WDR61Q9GZS3 305 aaKnown RBP11.47□□□□□ -0.57
LMX1A-204ENST00000489443 DEFB4AO15263 64 aa11.46□□□□□ -0.57
LMX1A-204ENST00000489443 IFNA5P01569 189 aa11.46□□□□□ -0.57
LMX1A-204ENST00000489443 HLA-DMBP28068 263 aa11.46□□□□□ -0.57
LMX1A-204ENST00000489443 OXA1LQ15070 435 aa11.46□□□□□ -0.57
LMX1A-204ENST00000489443 KMT2CQ8NEZ4 4911 aaKnown RBP11.45□□□□□ -0.58
LMX1A-204ENST00000489443 ZNF705DP0CH99 300 aaPredicted RBP11.45□□□□□ -0.58
LMX1A-204ENST00000489443 ZNF705BP0CI00 300 aaPredicted RBP11.45□□□□□ -0.58
LMX1A-204ENST00000489443 PSG9Q00887 426 aa11.45□□□□□ -0.58
LMX1A-204ENST00000489443 PSG3Q16557 428 aa11.45□□□□□ -0.58
LMX1A-204ENST00000489443 LCN15Q6UWW0 184 aa11.45□□□□□ -0.58
LMX1A-204ENST00000489443 CSNK1G2-AS1Q8NCQ2 148 aa11.45□□□□□ -0.58
LMX1A-204ENST00000489443 SCGB1C1Q8TD33 95 aa11.45□□□□□ -0.58
LMX1A-204ENST00000489443 CLUHP3Q96NS8 147 aa11.45□□□□□ -0.58
LMX1A-204ENST00000489443 SLC35B3Q9H1N7 401 aa11.45□□□□□ -0.58
LMX1A-204ENST00000489443 KCNIP2Q9NS61 270 aa11.45□□□□□ -0.58
LMX1A-204ENST00000489443 C17orf112F2Z3M2 114 aa11.44□□□□□ -0.58
LMX1A-204ENST00000489443 H3BQ15 152 aa11.44□□□□□ -0.58
LMX1A-204ENST00000489443 GIPP09681 153 aaPredicted RBP11.44□□□□□ -0.58
LMX1A-204ENST00000489443 PRB4P10163 310 aaPredicted RBP11.44□□□□□ -0.58
LMX1A-204ENST00000489443 CXCL2P19875 107 aa11.44□□□□□ -0.58
LMX1A-204ENST00000489443 PMS2P11Q13670 270 aa11.44□□□□□ -0.58
LMX1A-204ENST00000489443 HRH4Q9H3N8 390 aa11.44□□□□□ -0.58
LMX1A-204ENST00000489443 WFDC1Q9HC57 220 aa11.44□□□□□ -0.58
LMX1A-204ENST00000489443 STARD9Q9P2P6 4700 aa11.44□□□□□ -0.58
LMX1A-204ENST00000489443 CXorf65A6NEN9 183 aa11.43□□□□□ -0.58
LMX1A-204ENST00000489443 SLC17A3O00476 420 aa11.43□□□□□ -0.58
LMX1A-204ENST00000489443 DUSP14O95147 198 aaKnown RBP11.43□□□□□ -0.58
LMX1A-204ENST00000489443 IGLC2P0DOY2 106 aa11.43□□□□□ -0.58
LMX1A-204ENST00000489443 CNN1P51911 297 aaKnown RBP11.43□□□□□ -0.58
LMX1A-204ENST00000489443 Q5BKY6 102 aa11.43□□□□□ -0.58
LMX1A-204ENST00000489443 SLC50A1Q9BRV3 221 aa11.43□□□□□ -0.58
LMX1A-204ENST00000489443 MFFQ9GZY8 342 aa11.43□□□□□ -0.58
LMX1A-204ENST00000489443 ZNF331Q9NQX6 463 aaPredicted RBP11.43□□□□□ -0.58
LMX1A-204ENST00000489443 X6R8D5 127 aa11.43□□□□□ -0.58
LMX1A-204ENST00000489443 IGHV4-28A0A0C4DH34 117 aa11.42□□□□□ -0.58
LMX1A-204ENST00000489443 ZNF705EA8MWA4 302 aaPredicted RBP11.42□□□□□ -0.58
LMX1A-204ENST00000489443 HIST1H1AQ02539 215 aaPredicted RBP11.42□□□□□ -0.58
LMX1A-204ENST00000489443 GUK1Q16774 197 aa11.42□□□□□ -0.58
LMX1A-204ENST00000489443 FFAR4Q5NUL3 377 aa11.42□□□□□ -0.58
LMX1A-204ENST00000489443 MIR17HGQ75NE6 70 aa11.42□□□□□ -0.58
LMX1A-204ENST00000489443 Q8NAQ8 132 aa11.42□□□□□ -0.58
LMX1A-204ENST00000489443 ASB13Q8WXK3 278 aa11.42□□□□□ -0.58
LMX1A-204ENST00000489443 RPUSD4Q96CM3 377 aaKnown RBP11.42□□□□□ -0.58
LMX1A-204ENST00000489443 C11orf68Q9H3H3 251 aaKnown RBP11.42□□□□□ -0.58
LMX1A-204ENST00000489443 IGHV3OR16-12A0A075B7B8 117 aa11.41□□□□□ -0.58
LMX1A-204ENST00000489443 ZNF705FA8MVS1 300 aaPredicted RBP11.41□□□□□ -0.58
LMX1A-204ENST00000489443 RBMY1A1P0DJD3 496 aaKnown RBP11.41□□□□□ -0.58
LMX1A-204ENST00000489443 RBMY1CP0DJD4 496 aa11.41□□□□□ -0.58
LMX1A-204ENST00000489443 PYYP10082 97 aa11.41□□□□□ -0.58
LMX1A-204ENST00000489443 MIFP14174 115 aa11.41□□□□□ -0.58
LMX1A-204ENST00000489443 RHOBP62745 196 aa11.41□□□□□ -0.58
LMX1A-204ENST00000489443 RBMY1FQ15415 496 aaKnown RBP11.41□□□□□ -0.58
LMX1A-204ENST00000489443 OR8A1Q8NGG7 326 aa11.41□□□□□ -0.58
LMX1A-204ENST00000489443 SAT2Q96F10 170 aaPredicted RBP11.41□□□□□ -0.58
LMX1A-204ENST00000489443 ZNF586Q9NXT0 402 aa11.41□□□□□ -0.58
LMX1A-204ENST00000489443 TMEM14CQ9P0S9 112 aa11.41□□□□□ -0.58
LMX1A-204ENST00000489443 RFNGQ9Y644 331 aa11.41□□□□□ -0.58
LMX1A-204ENST00000489443 A8MTW9 85 aa11.4□□□□□ -0.58
LMX1A-204ENST00000489443 HIST1H1EP10412 219 aaKnown RBP11.4□□□□□ -0.58
LMX1A-204ENST00000489443 AMTNQ6UX39 209 aa11.4□□□□□ -0.58
LMX1A-204ENST00000489443 OR2T35Q8NGX2 323 aa11.4□□□□□ -0.58
LMX1A-204ENST00000489443 BLNKQ8WV28 456 aa11.4□□□□□ -0.58
LMX1A-204ENST00000489443 AQP10Q96PS8 301 aa11.4□□□□□ -0.58
LMX1A-204ENST00000489443 SLC25A2Q9BXI2 301 aa11.4□□□□□ -0.58
LMX1A-204ENST00000489443 PPP1R14DQ9NXH3 145 aa11.4□□□□□ -0.58
LMX1A-204ENST00000489443 TIMM9Q9Y5J7 89 aa11.4□□□□□ -0.58
LMX1A-204ENST00000489443 TRBV19A0A075B6N1 114 aa11.39□□□□□ -0.59
LMX1A-204ENST00000489443 FXYD6-FXYD2A0A087WZ82 144 aa11.39□□□□□ -0.59
LMX1A-204ENST00000489443 M0R2Z0 102 aa11.39□□□□□ -0.59
LMX1A-204ENST00000489443 NANOS2P60321 138 aaKnown RBP11.39□□□□□ -0.59
LMX1A-204ENST00000489443 SPINK13Q1W4C9 94 aa11.39□□□□□ -0.59
LMX1A-204ENST00000489443 INO80EQ8NBZ0 244 aaPredicted RBP11.39□□□□□ -0.59
LMX1A-204ENST00000489443 C11orf45Q8TAV5 145 aa11.39□□□□□ -0.59
LMX1A-204ENST00000489443 FAM167A-AS1Q96KT0 104 aa11.39□□□□□ -0.59
LMX1A-204ENST00000489443 MRPL32Q9BYC8 188 aaKnown RBP11.39□□□□□ -0.59
LMX1A-204ENST00000489443 PARD6GQ9BYG4 376 aaPredicted RBP11.39□□□□□ -0.59
LMX1A-204ENST00000489443 FUT9Q9Y231 359 aa11.39□□□□□ -0.59
LMX1A-204ENST00000489443 PRAC2D3DTV9 90 aa11.38□□□□□ -0.59
LMX1A-204ENST00000489443 ZNF705AQ6ZN79 300 aaPredicted RBP11.38□□□□□ -0.59
LMX1A-204ENST00000489443 OR51M1Q9H341 326 aa11.38□□□□□ -0.59
LMX1A-204ENST00000489443 GOLT1BQ9Y3E0 138 aa11.38□□□□□ -0.59
LMX1A-204ENST00000489443 ZNF253O75346 499 aa11.37□□□□□ -0.59
LMX1A-204ENST00000489443 AMBPP02760 352 aa11.37□□□□□ -0.59
LMX1A-204ENST00000489443 OR10J6PQ8NGY7 276 aa11.37□□□□□ -0.59
LMX1A-204ENST00000489443 IGF2BP2-AS1Q96M15 143 aa11.37□□□□□ -0.59
LMX1A-204ENST00000489443 TMEM208Q9BTX3 173 aa11.37□□□□□ -0.59
LMX1A-204ENST00000489443 PAXXQ9BUH6 204 aa11.37□□□□□ -0.59
LMX1A-204ENST00000489443 BOLA2-SMG1P6H3BVE0 249 aa11.36□□□□□ -0.59
LMX1A-204ENST00000489443 OR7C2O60412 319 aa11.36□□□□□ -0.59
LMX1A-204ENST00000489443 NDUFB4O95168 129 aa11.36□□□□□ -0.59
LMX1A-204ENST00000489443 OR10J4P0C629 311 aa11.36□□□□□ -0.59
LMX1A-204ENST00000489443 NBEAP1P0C6P0 100 aa11.36□□□□□ -0.59
LMX1A-204ENST00000489443 ZNF266Q14584 549 aa11.36□□□□□ -0.59
LMX1A-204ENST00000489443 ACOT6Q3I5F7 207 aaPredicted RBP11.36□□□□□ -0.59
LMX1A-204ENST00000489443 C1orf158Q8N1D5 194 aa11.36□□□□□ -0.59
LMX1A-204ENST00000489443 HSD17B11Q8NBQ5 300 aa11.36□□□□□ -0.59
LMX1A-204ENST00000489443 PHLDA1Q8WV24 401 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms