RNA–Protein interactions for RNA: ENST00000488857.5

VAMP2-204, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene VAMP2, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-204ENST00000488857 ZNF705AQ6ZN79 300 aaPredicted RBP16.19■□□□□ 0.18
VAMP2-204ENST00000488857 BPIFA4PQ86YQ2 179 aa16.19■□□□□ 0.18
VAMP2-204ENST00000488857 PFDN5Q99471 154 aa16.19■□□□□ 0.18
VAMP2-204ENST00000488857 SLC39A9Q9NUM3 307 aa16.19■□□□□ 0.18
VAMP2-204ENST00000488857 CXCL3P19876 107 aa16.18■□□□□ 0.18
VAMP2-204ENST00000488857 FGF7P21781 194 aa16.18■□□□□ 0.18
VAMP2-204ENST00000488857 B2MP61769 119 aa16.18■□□□□ 0.18
VAMP2-204ENST00000488857 MORN5Q5VZ52 161 aa16.18■□□□□ 0.18
VAMP2-204ENST00000488857 IGFL4Q6B9Z1 124 aa16.18■□□□□ 0.18
VAMP2-204ENST00000488857 LCN15Q6UWW0 184 aa16.18■□□□□ 0.18
VAMP2-204ENST00000488857 RNF182Q8N6D2 247 aa16.18■□□□□ 0.18
VAMP2-204ENST00000488857 OR5C1Q8NGR4 320 aa16.18■□□□□ 0.18
VAMP2-204ENST00000488857 NEU1Q99519 415 aa16.18■□□□□ 0.18
VAMP2-204ENST00000488857 SLC35B3Q9H1N7 401 aa16.18■□□□□ 0.18
VAMP2-204ENST00000488857 ZNF705FA8MVS1 300 aaPredicted RBP16.17■□□□□ 0.18
VAMP2-204ENST00000488857 DUSP14O95147 198 aaKnown RBP16.17■□□□□ 0.18
VAMP2-204ENST00000488857 ZNF705DP0CH99 300 aaPredicted RBP16.17■□□□□ 0.18
VAMP2-204ENST00000488857 ZNF705BP0CI00 300 aaPredicted RBP16.17■□□□□ 0.18
VAMP2-204ENST00000488857 PET100P0DJ07 73 aa16.17■□□□□ 0.18
VAMP2-204ENST00000488857 NANOS2P60321 138 aaKnown RBP16.17■□□□□ 0.18
VAMP2-204ENST00000488857 AMTNQ6UX39 209 aa16.17■□□□□ 0.18
VAMP2-204ENST00000488857 PHLDA1Q8WV24 401 aaPredicted RBP16.17■□□□□ 0.18
VAMP2-204ENST00000488857 RNF126Q9BV68 326 aa16.17■□□□□ 0.18
VAMP2-204ENST00000488857 NPCDR1Q9BY65 106 aa16.17■□□□□ 0.18
VAMP2-204ENST00000488857 KLK5Q9Y337 293 aaPredicted RBP16.17■□□□□ 0.18
VAMP2-204ENST00000488857 PXMP4Q9Y6I8 212 aa16.17■□□□□ 0.18
VAMP2-204ENST00000488857 MPC2O95563 127 aa16.16■□□□□ 0.18
VAMP2-204ENST00000488857 IGLC2P0DOY2 106 aa16.16■□□□□ 0.18
VAMP2-204ENST00000488857 SLC50A1Q9BRV3 221 aa16.16■□□□□ 0.18
VAMP2-204ENST00000488857 ALMS1Q8TCU4 4167 aa16.16■□□□□ 0.18
VAMP2-204ENST00000488857 CNN1P51911 297 aaKnown RBP16.15■□□□□ 0.18
VAMP2-204ENST00000488857 FXYD7P58549 80 aa16.15■□□□□ 0.18
VAMP2-204ENST00000488857 PSG3Q16557 428 aa16.15■□□□□ 0.18
VAMP2-204ENST00000488857 ZNF738Q8NE65 137 aa16.15■□□□□ 0.18
VAMP2-204ENST00000488857 LRRC20Q8TCA0 184 aa16.15■□□□□ 0.18
VAMP2-204ENST00000488857 ZNF331Q9NQX6 463 aaPredicted RBP16.15■□□□□ 0.18
VAMP2-204ENST00000488857 SMIM9A6NGZ8 99 aa16.14■□□□□ 0.17
VAMP2-204ENST00000488857 ALG5Q9Y673 324 aa16.14■□□□□ 0.17
VAMP2-204ENST00000488857 AMBPP02760 352 aa16.13■□□□□ 0.17
VAMP2-204ENST00000488857 HLA-DMBP28068 263 aa16.13■□□□□ 0.17
VAMP2-204ENST00000488857 GUK1Q16774 197 aa16.13■□□□□ 0.17
VAMP2-204ENST00000488857 OR11H7Q8NGC8 314 aa16.13■□□□□ 0.17
VAMP2-204ENST00000488857 THAP6Q8TBB0 222 aa16.13■□□□□ 0.17
VAMP2-204ENST00000488857 CLINT1Q14677 625 aa16.12■□□□□ 0.17
VAMP2-204ENST00000488857 OR8A1Q8NGG7 326 aa16.12■□□□□ 0.17
VAMP2-204ENST00000488857 SAT2Q96F10 170 aaPredicted RBP16.12■□□□□ 0.17
VAMP2-204ENST00000488857 WDR61Q9GZS3 305 aaKnown RBP16.12■□□□□ 0.17
VAMP2-204ENST00000488857 TRAV5A0A0B4J249 113 aa16.11■□□□□ 0.17
VAMP2-204ENST00000488857 H3BQ15 152 aa16.11■□□□□ 0.17
VAMP2-204ENST00000488857 C1orf158Q8N1D5 194 aa16.11■□□□□ 0.17
VAMP2-204ENST00000488857 RPUSD4Q96CM3 377 aaKnown RBP16.11■□□□□ 0.17
VAMP2-204ENST00000488857 IGF2BP2-AS1Q96M15 143 aa16.11■□□□□ 0.17
VAMP2-204ENST00000488857 KCNIP2Q9NS61 270 aa16.11■□□□□ 0.17
VAMP2-204ENST00000488857 GOLT1BQ9Y3E0 138 aa16.11■□□□□ 0.17
VAMP2-204ENST00000488857 HSPB11Q9Y547 144 aa16.11■□□□□ 0.17
VAMP2-204ENST00000488857 C11orf94C9JXX5 98 aa16.1■□□□□ 0.17
VAMP2-204ENST00000488857 SLC17A3O00476 420 aa16.1■□□□□ 0.17
VAMP2-204ENST00000488857 ZNF253O75346 499 aa16.1■□□□□ 0.17
VAMP2-204ENST00000488857 ATP5SQ99766 215 aa16.1■□□□□ 0.17
VAMP2-204ENST00000488857 TMEM14CQ9P0S9 112 aa16.1■□□□□ 0.17
VAMP2-204ENST00000488857 MBD2Q9UBB5 411 aa16.1■□□□□ 0.17
VAMP2-204ENST00000488857 TMEM189A5PLL7 270 aa16.09■□□□□ 0.17
VAMP2-204ENST00000488857 LINC00476Q8WZB0 136 aa16.09■□□□□ 0.17
VAMP2-204ENST00000488857 RFNGQ9Y644 331 aa16.09■□□□□ 0.17
VAMP2-204ENST00000488857 BOLA2-SMG1P6H3BVE0 249 aa16.08■□□□□ 0.16
VAMP2-204ENST00000488857 CRXO43186 299 aaPredicted RBP16.08■□□□□ 0.16
VAMP2-204ENST00000488857 SNRPCP09234 159 aaKnown RBP16.08■□□□□ 0.16
VAMP2-204ENST00000488857 RPL12P30050 165 aaKnown RBP16.08■□□□□ 0.16
VAMP2-204ENST00000488857 HIST1H1AQ02539 215 aaPredicted RBP16.08■□□□□ 0.16
VAMP2-204ENST00000488857 SPINK13Q1W4C9 94 aa16.08■□□□□ 0.16
VAMP2-204ENST00000488857 GCSAMLQ5JQS6 135 aa16.08■□□□□ 0.16
VAMP2-204ENST00000488857 CELA1Q9UNI1 258 aa16.08■□□□□ 0.16
VAMP2-204ENST00000488857 IGHV3OR16-12A0A075B7B8 117 aa16.07■□□□□ 0.16
VAMP2-204ENST00000488857 H3BTX0 84 aa16.07■□□□□ 0.16
VAMP2-204ENST00000488857 M0R2Z0 102 aa16.07■□□□□ 0.16
VAMP2-204ENST00000488857 ZNF586Q9NXT0 402 aa16.07■□□□□ 0.16
VAMP2-204ENST00000488857 C17orf112F2Z3M2 114 aa16.06■□□□□ 0.16
VAMP2-204ENST00000488857 INSP01308 110 aa16.06■□□□□ 0.16
VAMP2-204ENST00000488857 Q6ZTC4 211 aa16.06■□□□□ 0.16
VAMP2-204ENST00000488857 C2CD4CQ8TF44 421 aa16.06■□□□□ 0.16
VAMP2-204ENST00000488857 TRBV19A0A075B6N1 114 aa16.05■□□□□ 0.16
VAMP2-204ENST00000488857 HBE1P02100 147 aa16.05■□□□□ 0.16
VAMP2-204ENST00000488857 HIST1H1EP10412 219 aaKnown RBP16.05■□□□□ 0.16
VAMP2-204ENST00000488857 TCTAP57738 103 aa16.05■□□□□ 0.16
VAMP2-204ENST00000488857 PDE6HQ13956 83 aa16.05■□□□□ 0.16
VAMP2-204ENST00000488857 C12orf74Q32Q52 190 aa16.05■□□□□ 0.16
VAMP2-204ENST00000488857 PARD6GQ9BYG4 376 aaPredicted RBP16.05■□□□□ 0.16
VAMP2-204ENST00000488857 MED28Q9H204 178 aa16.05■□□□□ 0.16
VAMP2-204ENST00000488857 HYDINQ4G0P3 5121 aa16.05■□□□□ 0.16
VAMP2-204ENST00000488857 TRAV10A0A0B4J240 114 aa16.04■□□□□ 0.16
VAMP2-204ENST00000488857 RHOBP62745 196 aa16.04■□□□□ 0.16
VAMP2-204ENST00000488857 FCN2Q15485 313 aa16.04■□□□□ 0.16
VAMP2-204ENST00000488857 MRPL53Q96EL3 112 aaKnown RBP16.04■□□□□ 0.16
VAMP2-204ENST00000488857 FAM167A-AS1Q96KT0 104 aa16.04■□□□□ 0.16
VAMP2-204ENST00000488857 SLC25A2Q9BXI2 301 aa16.04■□□□□ 0.16
VAMP2-204ENST00000488857 MRPL32Q9BYC8 188 aaKnown RBP16.04■□□□□ 0.16
VAMP2-204ENST00000488857 TEX48A0A1B0GUV7 120 aa16.03■□□□□ 0.16
VAMP2-204ENST00000488857 PRAC2D3DTV9 90 aa16.03■□□□□ 0.16
VAMP2-204ENST00000488857 SPART-AS1P0CW21 52 aa16.03■□□□□ 0.16
VAMP2-204ENST00000488857 RRN3P1Q2M238 152 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms