RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 ZNF846Q147U1 533 aa13.71□□□□□ -0.21
CD55-209ENST00000488171 PSG3Q16557 428 aa13.71□□□□□ -0.21
CD55-209ENST00000488171 OR8A1Q8NGG7 326 aa13.71□□□□□ -0.21
CD55-209ENST00000488171 ZNF431Q8TF32 576 aaPredicted RBP13.71□□□□□ -0.21
CD55-209ENST00000488171 MGST2Q99735 147 aa13.71□□□□□ -0.21
CD55-209ENST00000488171 C11orf1Q9H5F2 150 aa13.71□□□□□ -0.21
CD55-209ENST00000488171 NUDT15Q9NV35 164 aa13.71□□□□□ -0.21
CD55-209ENST00000488171 HECTD4Q9Y4D8 3996 aa13.71□□□□□ -0.21
CD55-209ENST00000488171 ZNF705GA8MUZ8 300 aaPredicted RBP13.71□□□□□ -0.22
CD55-209ENST00000488171 BOLA2-SMG1P6H3BVE0 249 aa13.71□□□□□ -0.22
CD55-209ENST00000488171 PRB4P10163 310 aaPredicted RBP13.71□□□□□ -0.22
CD55-209ENST00000488171 HIST1H1AQ02539 215 aaPredicted RBP13.71□□□□□ -0.22
CD55-209ENST00000488171 LINC00305Q7Z4B0 112 aa13.71□□□□□ -0.22
CD55-209ENST00000488171 LSM5Q9Y4Y9 91 aaKnown RBP13.71□□□□□ -0.22
CD55-209ENST00000488171 TRAV12-2A0A075B6T6 113 aa13.7□□□□□ -0.22
CD55-209ENST00000488171 FAM25EA8MYX2 175 aa13.7□□□□□ -0.22
CD55-209ENST00000488171 L7N2F9 121 aa13.7□□□□□ -0.22
CD55-209ENST00000488171 HTN3P15516 51 aa13.7□□□□□ -0.22
CD55-209ENST00000488171 VAMP2P63027 116 aa13.7□□□□□ -0.22
CD55-209ENST00000488171 MORN5Q5VZ52 161 aa13.7□□□□□ -0.22
CD55-209ENST00000488171 LRRC20Q8TCA0 184 aa13.7□□□□□ -0.22
CD55-209ENST00000488171 TMEM37Q8WXS4 190 aa13.7□□□□□ -0.22
CD55-209ENST00000488171 RNF24Q9Y225 148 aa13.7□□□□□ -0.22
CD55-209ENST00000488171 C5orf51A6NDU8 294 aa13.69□□□□□ -0.22
CD55-209ENST00000488171 CXCL2P19875 107 aa13.69□□□□□ -0.22
CD55-209ENST00000488171 B2MP61769 119 aa13.69□□□□□ -0.22
CD55-209ENST00000488171 DAD1P61803 113 aa13.69□□□□□ -0.22
CD55-209ENST00000488171 ZNF331Q9NQX6 463 aaPredicted RBP13.69□□□□□ -0.22
CD55-209ENST00000488171 PLAC8L1A1L4L8 177 aa13.68□□□□□ -0.22
CD55-209ENST00000488171 SNRPCP09234 159 aaKnown RBP13.68□□□□□ -0.22
CD55-209ENST00000488171 TSPOP30536 169 aa13.68□□□□□ -0.22
CD55-209ENST00000488171 BCAP31P51572 246 aa13.68□□□□□ -0.22
CD55-209ENST00000488171 RHOBP62745 196 aa13.68□□□□□ -0.22
CD55-209ENST00000488171 LCN15Q6UWW0 184 aa13.68□□□□□ -0.22
CD55-209ENST00000488171 C12orf45Q8N5I9 185 aaPredicted RBP13.68□□□□□ -0.22
CD55-209ENST00000488171 RPUSD4Q96CM3 377 aaKnown RBP13.68□□□□□ -0.22
CD55-209ENST00000488171 C2orf50Q96LR7 162 aa13.68□□□□□ -0.22
CD55-209ENST00000488171 CCDC32Q9BV29 185 aa13.68□□□□□ -0.22
CD55-209ENST00000488171 FAM24AA6NFZ4 105 aa13.67□□□□□ -0.22
CD55-209ENST00000488171 COX7A2P2O60397 106 aa13.67□□□□□ -0.22
CD55-209ENST00000488171 CST7O76096 145 aa13.67□□□□□ -0.22
CD55-209ENST00000488171 H2AFB2P0C5Z0 115 aa13.67□□□□□ -0.22
CD55-209ENST00000488171 AZU1P20160 251 aa13.67□□□□□ -0.22
CD55-209ENST00000488171 CAV2P51636 162 aa13.67□□□□□ -0.22
CD55-209ENST00000488171 OPCMLQ14982 345 aa13.67□□□□□ -0.22
CD55-209ENST00000488171 TMEM88Q6PEY1 159 aa13.67□□□□□ -0.22
CD55-209ENST00000488171 LYRM9A8MSI8 78 aa13.66□□□□□ -0.22
CD55-209ENST00000488171 M0R2N4 97 aa13.66□□□□□ -0.22
CD55-209ENST00000488171 SLC17A3O00476 420 aa13.66□□□□□ -0.22
CD55-209ENST00000488171 CAMLGP49069 296 aa13.66□□□□□ -0.22
CD55-209ENST00000488171 IL15RAQ13261 267 aa13.66□□□□□ -0.22
CD55-209ENST00000488171 C10orf113Q5VZT2 155 aa13.66□□□□□ -0.22
CD55-209ENST00000488171 NRARPQ7Z6K4 114 aa13.66□□□□□ -0.22
CD55-209ENST00000488171 BPIFA4PQ86YQ2 179 aa13.66□□□□□ -0.22
CD55-209ENST00000488171 SLC50A1Q9BRV3 221 aa13.66□□□□□ -0.22
CD55-209ENST00000488171 H3BTX0 84 aa13.65□□□□□ -0.22
CD55-209ENST00000488171 IGLC2P0DOY2 106 aa13.65□□□□□ -0.22
CD55-209ENST00000488171 VWC2Q2TAL6 325 aa13.65□□□□□ -0.22
CD55-209ENST00000488171 MIC13Q5XKP0 118 aa13.65□□□□□ -0.22
CD55-209ENST00000488171 LINC00336Q6ZUF6 198 aa13.65□□□□□ -0.22
CD55-209ENST00000488171 PPP1R14DQ9NXH3 145 aa13.65□□□□□ -0.22
CD55-209ENST00000488171 WDR83OSQ9Y284 106 aa13.65□□□□□ -0.22
CD55-209ENST00000488171 DNAH2Q9P225 4427 aa13.65□□□□□ -0.22
CD55-209ENST00000488171 HERC2O95714 4834 aa13.64□□□□□ -0.23
CD55-209ENST00000488171 FAT2Q9NYQ8 4349 aa13.64□□□□□ -0.23
CD55-209ENST00000488171 UBE2DNLQ8IWF7 75 aa13.64□□□□□ -0.23
CD55-209ENST00000488171 TMEM256Q8N2U0 113 aa13.64□□□□□ -0.23
CD55-209ENST00000488171 LINC01587Q99440 93 aa13.64□□□□□ -0.23
CD55-209ENST00000488171 DNAJC4Q9NNZ3 241 aa13.64□□□□□ -0.23
CD55-209ENST00000488171 LYRM2Q9NU23 88 aaPredicted RBP13.64□□□□□ -0.23
CD55-209ENST00000488171 UQCC1Q9NVA1 299 aa13.64□□□□□ -0.23
CD55-209ENST00000488171 FAM240BA0A1B0GVZ2 78 aa13.63□□□□□ -0.23
CD55-209ENST00000488171 IGSF23A1L1A6 192 aa13.63□□□□□ -0.23
CD55-209ENST00000488171 H3BQ15 152 aa13.63□□□□□ -0.23
CD55-209ENST00000488171 PVALBP20472 110 aaPredicted RBP13.63□□□□□ -0.23
CD55-209ENST00000488171 CDKN1BP46527 198 aa13.63□□□□□ -0.23
CD55-209ENST00000488171 TAS2R60P59551 318 aa13.63□□□□□ -0.23
CD55-209ENST00000488171 S100A10P60903 97 aa13.63□□□□□ -0.23
CD55-209ENST00000488171 RAB31Q13636 194 aa13.63□□□□□ -0.23
CD55-209ENST00000488171 RAB32Q13637 225 aa13.63□□□□□ -0.23
CD55-209ENST00000488171 FCN2Q15485 313 aa13.63□□□□□ -0.23
CD55-209ENST00000488171 LGALS9BQ3B8N2 356 aa13.63□□□□□ -0.23
CD55-209ENST00000488171 SAT2Q96F10 170 aaPredicted RBP13.63□□□□□ -0.23
CD55-209ENST00000488171 TRAV5A0A0B4J249 113 aa13.62□□□□□ -0.23
CD55-209ENST00000488171 A0A1B0GVY2 172 aa13.62□□□□□ -0.23
CD55-209ENST00000488171 PRAC2D3DTV9 90 aa13.62□□□□□ -0.23
CD55-209ENST00000488171 RTL8CO15255 209 aa13.62□□□□□ -0.23
CD55-209ENST00000488171 DEFB130BP0DP73 79 aa13.62□□□□□ -0.23
CD55-209ENST00000488171 DEFB130AP0DP74 79 aa13.62□□□□□ -0.23
CD55-209ENST00000488171 SULT1A1P50225 295 aa13.62□□□□□ -0.23
CD55-209ENST00000488171 KIR3DS1Q14943 382 aa13.62□□□□□ -0.23
CD55-209ENST00000488171 RNF212Q495C1 297 aa13.62□□□□□ -0.23
CD55-209ENST00000488171 Q6ZRG5 221 aa13.62□□□□□ -0.23
CD55-209ENST00000488171 LINC00299Q6ZSB3 139 aa13.62□□□□□ -0.23
CD55-209ENST00000488171 TMEM252Q8N6L7 170 aa13.62□□□□□ -0.23
CD55-209ENST00000488171 IGLV2-18A0A075B6J9 118 aa13.61□□□□□ -0.23
CD55-209ENST00000488171 UBE2L5PA0A1B0GUS4 154 aa13.61□□□□□ -0.23
CD55-209ENST00000488171 S100A11P31949 105 aa13.61□□□□□ -0.23
CD55-209ENST00000488171 Q6ZR54 194 aa13.61□□□□□ -0.23
CD55-209ENST00000488171 PARD6GQ9BYG4 376 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms