RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 EBLN2Q6P2I7 272 aa12.37□□□□□ -0.43
HMG20B-212ENST00000487894 ZNF709Q8N972 641 aa12.37□□□□□ -0.43
HMG20B-212ENST00000487894 OR4B1Q8NGF8 309 aa12.37□□□□□ -0.43
HMG20B-212ENST00000487894 PFDN5Q99471 154 aa12.37□□□□□ -0.43
HMG20B-212ENST00000487894 C1QTNF4Q9BXJ3 329 aa12.37□□□□□ -0.43
HMG20B-212ENST00000487894 DNAJC4Q9NNZ3 241 aa12.37□□□□□ -0.43
HMG20B-212ENST00000487894 XCL2Q9UBD3 114 aa12.37□□□□□ -0.43
HMG20B-212ENST00000487894 X6R8D5 127 aa12.37□□□□□ -0.43
HMG20B-212ENST00000487894 RYR2Q92736 4967 aa12.37□□□□□ -0.43
HMG20B-212ENST00000487894 CXCL2P19875 107 aa12.36□□□□□ -0.43
HMG20B-212ENST00000487894 HLA-DMBP28068 263 aa12.36□□□□□ -0.43
HMG20B-212ENST00000487894 PMS2P11Q13670 270 aa12.36□□□□□ -0.43
HMG20B-212ENST00000487894 FAM78BQ5VT40 261 aa12.36□□□□□ -0.43
HMG20B-212ENST00000487894 BPIFA4PQ86YQ2 179 aa12.36□□□□□ -0.43
HMG20B-212ENST00000487894 SLC35B3Q9H1N7 401 aa12.36□□□□□ -0.43
HMG20B-212ENST00000487894 HSPB11Q9Y547 144 aa12.36□□□□□ -0.43
HMG20B-212ENST00000487894 TRAV5A0A0B4J249 113 aa12.35□□□□□ -0.43
HMG20B-212ENST00000487894 IGHV4-28A0A0C4DH34 117 aa12.35□□□□□ -0.43
HMG20B-212ENST00000487894 DEFB4AO15263 64 aa12.35□□□□□ -0.43
HMG20B-212ENST00000487894 FXYD7P58549 80 aa12.35□□□□□ -0.43
HMG20B-212ENST00000487894 FCN2Q15485 313 aa12.35□□□□□ -0.43
HMG20B-212ENST00000487894 LCN15Q6UWW0 184 aa12.35□□□□□ -0.43
HMG20B-212ENST00000487894 OR11H7Q8NGC8 314 aa12.35□□□□□ -0.43
HMG20B-212ENST00000487894 WDR61Q9GZS3 305 aaKnown RBP12.35□□□□□ -0.43
HMG20B-212ENST00000487894 DNAH1Q9P2D7 4330 aa12.35□□□□□ -0.43
HMG20B-212ENST00000487894 SNRPCP09234 159 aaKnown RBP12.34□□□□□ -0.43
HMG20B-212ENST00000487894 RBMY1A1P0DJD3 496 aaKnown RBP12.34□□□□□ -0.43
HMG20B-212ENST00000487894 RBMY1CP0DJD4 496 aa12.34□□□□□ -0.43
HMG20B-212ENST00000487894 IGLC2P0DOY2 106 aa12.34□□□□□ -0.43
HMG20B-212ENST00000487894 MIFP14174 115 aa12.34□□□□□ -0.43
HMG20B-212ENST00000487894 RPL12P30050 165 aaKnown RBP12.34□□□□□ -0.43
HMG20B-212ENST00000487894 PSG9Q00887 426 aa12.34□□□□□ -0.43
HMG20B-212ENST00000487894 RBMY1FQ15415 496 aaKnown RBP12.34□□□□□ -0.43
HMG20B-212ENST00000487894 GCSAMLQ5JQS6 135 aa12.34□□□□□ -0.43
HMG20B-212ENST00000487894 AMTNQ6UX39 209 aa12.34□□□□□ -0.43
HMG20B-212ENST00000487894 ZNF738Q8NE65 137 aa12.34□□□□□ -0.43
HMG20B-212ENST00000487894 ATP5SQ99766 215 aa12.34□□□□□ -0.43
HMG20B-212ENST00000487894 MED28Q9H204 178 aa12.34□□□□□ -0.43
HMG20B-212ENST00000487894 CXorf65A6NEN9 183 aa12.33□□□□□ -0.44
HMG20B-212ENST00000487894 SLC17A3O00476 420 aa12.33□□□□□ -0.44
HMG20B-212ENST00000487894 CNN1P51911 297 aaKnown RBP12.33□□□□□ -0.44
HMG20B-212ENST00000487894 PSG3Q16557 428 aa12.33□□□□□ -0.44
HMG20B-212ENST00000487894 LRRC20Q8TCA0 184 aa12.33□□□□□ -0.44
HMG20B-212ENST00000487894 SLC50A1Q9BRV3 221 aa12.33□□□□□ -0.44
HMG20B-212ENST00000487894 ZNF331Q9NQX6 463 aaPredicted RBP12.33□□□□□ -0.44
HMG20B-212ENST00000487894 H3BQ15 152 aa12.32□□□□□ -0.44
HMG20B-212ENST00000487894 H3BTX0 84 aa12.32□□□□□ -0.44
HMG20B-212ENST00000487894 ZNF705DP0CH99 300 aaPredicted RBP12.32□□□□□ -0.44
HMG20B-212ENST00000487894 ZNF705BP0CI00 300 aaPredicted RBP12.32□□□□□ -0.44
HMG20B-212ENST00000487894 RGS21Q2M5E4 152 aa12.32□□□□□ -0.44
HMG20B-212ENST00000487894 ZNF705AQ6ZN79 300 aaPredicted RBP12.32□□□□□ -0.44
HMG20B-212ENST00000487894 SMIM3Q9BZL3 60 aa12.32□□□□□ -0.44
HMG20B-212ENST00000487894 MFFQ9GZY8 342 aa12.32□□□□□ -0.44
HMG20B-212ENST00000487894 HRH4Q9H3N8 390 aa12.32□□□□□ -0.44
HMG20B-212ENST00000487894 LCE6AA0A183 80 aa12.31□□□□□ -0.44
HMG20B-212ENST00000487894 ZNF705FA8MVS1 300 aaPredicted RBP12.31□□□□□ -0.44
HMG20B-212ENST00000487894 DUSP14O95147 198 aaKnown RBP12.31□□□□□ -0.44
HMG20B-212ENST00000487894 NANOS2P60321 138 aaKnown RBP12.31□□□□□ -0.44
HMG20B-212ENST00000487894 C11orf45Q8TAV5 145 aa12.31□□□□□ -0.44
HMG20B-212ENST00000487894 SAT2Q96F10 170 aaPredicted RBP12.31□□□□□ -0.44
HMG20B-212ENST00000487894 KCNIP2Q9NS61 270 aa12.31□□□□□ -0.44
HMG20B-212ENST00000487894 NUPR2A6NF83 97 aa12.3□□□□□ -0.44
HMG20B-212ENST00000487894 PRB4P10163 310 aaPredicted RBP12.3□□□□□ -0.44
HMG20B-212ENST00000487894 OR8A1Q8NGG7 326 aa12.3□□□□□ -0.44
HMG20B-212ENST00000487894 RPUSD4Q96CM3 377 aaKnown RBP12.3□□□□□ -0.44
HMG20B-212ENST00000487894 ZNF586Q9NXT0 402 aa12.3□□□□□ -0.44
HMG20B-212ENST00000487894 TMEM14CQ9P0S9 112 aa12.3□□□□□ -0.44
HMG20B-212ENST00000487894 C17orf112F2Z3M2 114 aa12.29□□□□□ -0.44
HMG20B-212ENST00000487894 HIST1H1AQ02539 215 aaPredicted RBP12.29□□□□□ -0.44
HMG20B-212ENST00000487894 OXA1LQ15070 435 aa12.29□□□□□ -0.44
HMG20B-212ENST00000487894 GUK1Q16774 197 aa12.29□□□□□ -0.44
HMG20B-212ENST00000487894 NEU1Q99519 415 aa12.29□□□□□ -0.44
HMG20B-212ENST00000487894 SLC25A2Q9BXI2 301 aa12.29□□□□□ -0.44
HMG20B-212ENST00000487894 WFDC1Q9HC57 220 aa12.29□□□□□ -0.44
HMG20B-212ENST00000487894 HYDINQ4G0P3 5121 aa12.28□□□□□ -0.44
HMG20B-212ENST00000487894 M0R2Z0 102 aa12.28□□□□□ -0.44
HMG20B-212ENST00000487894 EREGO14944 169 aa12.28□□□□□ -0.44
HMG20B-212ENST00000487894 GIPP09681 153 aaPredicted RBP12.28□□□□□ -0.44
HMG20B-212ENST00000487894 PYYP10082 97 aa12.28□□□□□ -0.44
HMG20B-212ENST00000487894 SPINK13Q1W4C9 94 aa12.28□□□□□ -0.44
HMG20B-212ENST00000487894 CEMP1Q6PRD7 247 aaPredicted RBP12.28□□□□□ -0.44
HMG20B-212ENST00000487894 MIR17HGQ75NE6 70 aa12.28□□□□□ -0.44
HMG20B-212ENST00000487894 C1orf158Q8N1D5 194 aa12.28□□□□□ -0.44
HMG20B-212ENST00000487894 PHLDA1Q8WV24 401 aaPredicted RBP12.28□□□□□ -0.44
HMG20B-212ENST00000487894 FAM167A-AS1Q96KT0 104 aa12.28□□□□□ -0.44
HMG20B-212ENST00000487894 PARD6GQ9BYG4 376 aaPredicted RBP12.28□□□□□ -0.44
HMG20B-212ENST00000487894 TRBV19A0A075B6N1 114 aa12.27□□□□□ -0.45
HMG20B-212ENST00000487894 IGHV3OR16-12A0A075B7B8 117 aa12.27□□□□□ -0.45
HMG20B-212ENST00000487894 PRAC2D3DTV9 90 aa12.27□□□□□ -0.45
HMG20B-212ENST00000487894 BOLA2-SMG1P6H3BVE0 249 aa12.27□□□□□ -0.45
HMG20B-212ENST00000487894 CRXO43186 299 aaPredicted RBP12.27□□□□□ -0.45
HMG20B-212ENST00000487894 ZNF253O75346 499 aa12.27□□□□□ -0.45
HMG20B-212ENST00000487894 IFNA5P01569 189 aa12.27□□□□□ -0.45
HMG20B-212ENST00000487894 AMBPP02760 352 aa12.27□□□□□ -0.45
HMG20B-212ENST00000487894 ASB13Q8WXK3 278 aa12.27□□□□□ -0.45
HMG20B-212ENST00000487894 IGF2BP2-AS1Q96M15 143 aa12.27□□□□□ -0.45
HMG20B-212ENST00000487894 MRPL32Q9BYC8 188 aaKnown RBP12.27□□□□□ -0.45
HMG20B-212ENST00000487894 CELA1Q9UNI1 258 aa12.27□□□□□ -0.45
HMG20B-212ENST00000487894 GOLT1BQ9Y3E0 138 aa12.27□□□□□ -0.45
HMG20B-212ENST00000487894 NDUFB4O95168 129 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms