RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 PANO1I0J062 215 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 K7EIM0 57 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 K7EP13 123 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 CYB5BO43169 146 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 GATCO43716 136 aaKnown RBP2.87□□□□□ -1.95
BRCA1-217ENST00000487825 HSBP1O75506 76 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 FABP1P07148 127 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 OR4E1P0C645 316 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 HSD17B1P14061 328 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 ELK1P19419 428 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 DCKP27707 260 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 HTR2CP28335 458 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 Q56UQ5 140 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 OR2T5Q6IEZ7 315 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 GID4Q8IVV7 300 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 BOD1L2Q8IYS8 172 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 VKORC1L1Q8N0U8 176 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 GDPD1Q8N9F7 314 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 OR4B1Q8NGF8 309 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 OR2T29Q8NH02 315 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 LINC01600Q96MT4 127 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 SDHCQ99643 169 aaPredicted RBP2.87□□□□□ -1.95
BRCA1-217ENST00000487825 RSG1Q9BU20 258 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 PAXXQ9BUH6 204 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 SELENOIQ9C0D9 397 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 NXF2Q9GZY0 626 aaKnown RBP2.87□□□□□ -1.95
BRCA1-217ENST00000487825 BANF2Q9H503 90 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 VCX3AQ9NNX9 186 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 AMBNQ9NP70 447 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 TMEM138Q9NPI0 162 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 SAR1AQ9NR31 198 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 TRBV6-6A0A0A6YYG2 114 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 IGHV3-21A0A0B4J1V1 117 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 A0A0J9YY99 117 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 TMEM212A6NML5 194 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 M0R129 80 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 DCTN3O75935 186 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 FCGR3AP08637 254 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 ANXA3P12429 323 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 HLA-GP17693 338 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 CRHBPP24387 322 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 HLA-DMAP28067 261 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 TSPOP30536 169 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 RAB4BP61018 213 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 RPL8P62917 257 aaKnown RBP2.86□□□□□ -1.95
BRCA1-217ENST00000487825 CXCL6P80162 114 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 OR5I1Q13606 314 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 SPCS2Q15005 226 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 COX19Q49B96 90 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 GDF5OSQ5U4N7 250 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 TOMM20LQ6UXN7 152 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 C10orf67Q8IYJ2 551 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 CCDC71LQ8N9Z2 235 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 OR52I1Q8NGK6 324 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 RBPMSQ93062 196 aaKnown RBP2.86□□□□□ -1.95
BRCA1-217ENST00000487825 Q96MT0 163 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 ZNF184Q99676 751 aaPredicted RBP2.86□□□□□ -1.95
BRCA1-217ENST00000487825 CIB1Q99828 191 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 LINC00467Q9BRT7 94 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 DCUN1D5Q9BTE7 237 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 SLC35B3Q9H1N7 401 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 LY96Q9Y6Y9 160 aa2.86□□□□□ -1.95
BRCA1-217ENST00000487825 M0QXV9 152 aa2.85□□□□□ -1.95
BRCA1-217ENST00000487825 GOSR2O14653 212 aa2.85□□□□□ -1.95
BRCA1-217ENST00000487825 PSCAO43653 123 aa2.85□□□□□ -1.95
BRCA1-217ENST00000487825 PRM2P04554 102 aa2.85□□□□□ -1.95
BRCA1-217ENST00000487825 RD3LP0DJH9 198 aa2.85□□□□□ -1.95
BRCA1-217ENST00000487825 PGAM2P15259 253 aa2.85□□□□□ -1.95
BRCA1-217ENST00000487825 CELP19835 753 aa2.85□□□□□ -1.95
BRCA1-217ENST00000487825 SERPINB10P48595 397 aa2.85□□□□□ -1.95
BRCA1-217ENST00000487825 PSME3P61289 254 aa2.85□□□□□ -1.95
BRCA1-217ENST00000487825 SNRPD3P62318 126 aaKnown RBP2.85□□□□□ -1.95
BRCA1-217ENST00000487825 PPP3R1P63098 170 aa2.85□□□□□ -1.95
BRCA1-217ENST00000487825 DHRS2Q13268 280 aa2.85□□□□□ -1.95
BRCA1-217ENST00000487825 RBM48Q5RL73 367 aaKnown RBP2.85□□□□□ -1.95
BRCA1-217ENST00000487825 OR2G6Q5TZ20 316 aa2.85□□□□□ -1.95
BRCA1-217ENST00000487825 GLIPR1L1Q6UWM5 242 aa2.85□□□□□ -1.95
BRCA1-217ENST00000487825 C6orf201Q7Z4U5 140 aa2.85□□□□□ -1.95
BRCA1-217ENST00000487825 CROCCP2Q86T23 111 aa2.85□□□□□ -1.95
BRCA1-217ENST00000487825 CMTM1Q8IZ96 169 aa2.85□□□□□ -1.95
BRCA1-217ENST00000487825 ZNF738Q8NE65 137 aa2.85□□□□□ -1.95
BRCA1-217ENST00000487825 OR10J6PQ8NGY7 276 aa2.85□□□□□ -1.95
BRCA1-217ENST00000487825 ISOC2Q96AB3 205 aa2.85□□□□□ -1.95
BRCA1-217ENST00000487825 TLCD1Q96CP7 247 aa2.85□□□□□ -1.95
BRCA1-217ENST00000487825 PDCD1LG2Q9BQ51 273 aa2.85□□□□□ -1.95
BRCA1-217ENST00000487825 FAAP24Q9BTP7 215 aa2.85□□□□□ -1.95
BRCA1-217ENST00000487825 OR51M1Q9H341 326 aa2.85□□□□□ -1.95
BRCA1-217ENST00000487825 HRASLSQ9HDD0 168 aa2.85□□□□□ -1.95
BRCA1-217ENST00000487825 F11RQ9Y624 299 aaKnown RBP2.85□□□□□ -1.95
BRCA1-217ENST00000487825 V9GYY9 64 aa2.85□□□□□ -1.95
BRCA1-217ENST00000487825 A0A0J9YXV3 536 aa2.84□□□□□ -1.95
BRCA1-217ENST00000487825 FAM74A7A6NL05 159 aa2.84□□□□□ -1.95
BRCA1-217ENST00000487825 ZNF705GA8MUZ8 300 aaPredicted RBP2.84□□□□□ -1.95
BRCA1-217ENST00000487825 ADAP1O75689 374 aa2.84□□□□□ -1.95
BRCA1-217ENST00000487825 TSPAN13O95857 204 aa2.84□□□□□ -1.95
BRCA1-217ENST00000487825 CD2P06729 351 aa2.84□□□□□ -1.95
BRCA1-217ENST00000487825 PET100P0DJ07 73 aa2.84□□□□□ -1.95
BRCA1-217ENST00000487825 COX4I1P13073 169 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms