RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 CELA1Q9UNI1 258 aa14.72□□□□□ -0.05
HDAC4-209ENST00000487617 GOLT1BQ9Y3E0 138 aa14.72□□□□□ -0.05
HDAC4-209ENST00000487617 SMIM9A6NGZ8 99 aa14.71□□□□□ -0.05
HDAC4-209ENST00000487617 CXCL3P19876 107 aa14.71□□□□□ -0.05
HDAC4-209ENST00000487617 PRR20EP86478 221 aa14.71□□□□□ -0.05
HDAC4-209ENST00000487617 PRR20CP86479 221 aa14.71□□□□□ -0.05
HDAC4-209ENST00000487617 PRR20DP86480 221 aa14.71□□□□□ -0.05
HDAC4-209ENST00000487617 PRR20BP86481 221 aa14.71□□□□□ -0.05
HDAC4-209ENST00000487617 PRR20AP86496 221 aa14.71□□□□□ -0.05
HDAC4-209ENST00000487617 ATP6V1FQ16864 119 aa14.71□□□□□ -0.05
HDAC4-209ENST00000487617 MORN5Q5VZ52 161 aa14.71□□□□□ -0.05
HDAC4-209ENST00000487617 AMTNQ6UX39 209 aa14.71□□□□□ -0.05
HDAC4-209ENST00000487617 Q6ZTC4 211 aa14.71□□□□□ -0.05
HDAC4-209ENST00000487617 OR1L4Q8NGR5 311 aa14.71□□□□□ -0.05
HDAC4-209ENST00000487617 E5RGE8 158 aa14.7□□□□□ -0.06
HDAC4-209ENST00000487617 SNRPCP09234 159 aaKnown RBP14.7□□□□□ -0.06
HDAC4-209ENST00000487617 FGF7P21781 194 aa14.7□□□□□ -0.06
HDAC4-209ENST00000487617 RPL29P47914 159 aaKnown RBP14.7□□□□□ -0.06
HDAC4-209ENST00000487617 EMP1P54849 157 aa14.7□□□□□ -0.06
HDAC4-209ENST00000487617 CYCSP99999 105 aaKnown RBP14.7□□□□□ -0.06
HDAC4-209ENST00000487617 OPCMLQ14982 345 aa14.7□□□□□ -0.06
HDAC4-209ENST00000487617 PSG3Q16557 428 aa14.7□□□□□ -0.06
HDAC4-209ENST00000487617 SLC25A31Q9H0C2 315 aa14.7□□□□□ -0.06
HDAC4-209ENST00000487617 RFNGQ9Y644 331 aa14.7□□□□□ -0.06
HDAC4-209ENST00000487617 TRAV10A0A0B4J240 114 aa14.69□□□□□ -0.06
HDAC4-209ENST00000487617 CXCL2P19875 107 aa14.69□□□□□ -0.06
HDAC4-209ENST00000487617 B2MP61769 119 aa14.69□□□□□ -0.06
HDAC4-209ENST00000487617 HIST1H1AQ02539 215 aaPredicted RBP14.69□□□□□ -0.06
HDAC4-209ENST00000487617 LCN15Q6UWW0 184 aa14.69□□□□□ -0.06
HDAC4-209ENST00000487617 ZNF767PQ75MW2 155 aa14.69□□□□□ -0.06
HDAC4-209ENST00000487617 C1orf158Q8N1D5 194 aa14.69□□□□□ -0.06
HDAC4-209ENST00000487617 OR11H7Q8NGC8 314 aa14.69□□□□□ -0.06
HDAC4-209ENST00000487617 IGF2BP2-AS1Q96M15 143 aa14.69□□□□□ -0.06
HDAC4-209ENST00000487617 PFDN5Q99471 154 aa14.69□□□□□ -0.06
HDAC4-209ENST00000487617 SLC39A9Q9NUM3 307 aa14.69□□□□□ -0.06
HDAC4-209ENST00000487617 OR5AC2Q9NZP5 309 aa14.69□□□□□ -0.06
HDAC4-209ENST00000487617 TMEM189A5PLL7 270 aa14.68□□□□□ -0.06
HDAC4-209ENST00000487617 IGLL5B9A064 214 aa14.68□□□□□ -0.06
HDAC4-209ENST00000487617 SSNA1O43805 119 aa14.68□□□□□ -0.06
HDAC4-209ENST00000487617 AMBPP02760 352 aa14.68□□□□□ -0.06
HDAC4-209ENST00000487617 NHLH2Q02577 135 aa14.68□□□□□ -0.06
HDAC4-209ENST00000487617 SPINK13Q1W4C9 94 aa14.68□□□□□ -0.06
HDAC4-209ENST00000487617 C12orf74Q32Q52 190 aa14.68□□□□□ -0.06
HDAC4-209ENST00000487617 OR8A1Q8NGG7 326 aa14.68□□□□□ -0.06
HDAC4-209ENST00000487617 CHAC2Q8WUX2 184 aa14.68□□□□□ -0.06
HDAC4-209ENST00000487617 SLC50A1Q9BRV3 221 aa14.68□□□□□ -0.06
HDAC4-209ENST00000487617 ZNF331Q9NQX6 463 aaPredicted RBP14.68□□□□□ -0.06
HDAC4-209ENST00000487617 PXMP4Q9Y6I8 212 aa14.68□□□□□ -0.06
HDAC4-209ENST00000487617 TRAV5A0A0B4J249 113 aa14.67□□□□□ -0.06
HDAC4-209ENST00000487617 H0YIZ8 118 aa14.67□□□□□ -0.06
HDAC4-209ENST00000487617 H3BTX0 84 aa14.67□□□□□ -0.06
HDAC4-209ENST00000487617 M0R2Z0 102 aa14.67□□□□□ -0.06
HDAC4-209ENST00000487617 HBE1P02100 147 aa14.67□□□□□ -0.06
HDAC4-209ENST00000487617 PRB4P10163 310 aaPredicted RBP14.67□□□□□ -0.06
HDAC4-209ENST00000487617 H2BFSP57053 126 aa14.67□□□□□ -0.06
HDAC4-209ENST00000487617 RHOBP62745 196 aa14.67□□□□□ -0.06
HDAC4-209ENST00000487617 OR5C1Q8NGR4 320 aa14.67□□□□□ -0.06
HDAC4-209ENST00000487617 RPUSD4Q96CM3 377 aaKnown RBP14.67□□□□□ -0.06
HDAC4-209ENST00000487617 TMEM208Q9BTX3 173 aa14.67□□□□□ -0.06
HDAC4-209ENST00000487617 DNAH1Q9P2D7 4330 aa14.66□□□□□ -0.06
HDAC4-209ENST00000487617 MPDU1O75352 247 aa14.66□□□□□ -0.06
HDAC4-209ENST00000487617 SPART-AS1P0CW21 52 aa14.66□□□□□ -0.06
HDAC4-209ENST00000487617 TCTAP57738 103 aa14.66□□□□□ -0.06
HDAC4-209ENST00000487617 PPP1R1CQ8WVI7 109 aa14.66□□□□□ -0.06
HDAC4-209ENST00000487617 PPP1R14DQ9NXH3 145 aa14.66□□□□□ -0.06
HDAC4-209ENST00000487617 PLECQ15149 4684 aaKnown RBP14.66□□□□□ -0.06
HDAC4-209ENST00000487617 ALMS1Q8TCU4 4167 aa14.66□□□□□ -0.06
HDAC4-209ENST00000487617 BOLA2-SMG1P6H3BVE0 249 aa14.65□□□□□ -0.06
HDAC4-209ENST00000487617 INSP01308 110 aa14.65□□□□□ -0.06
HDAC4-209ENST00000487617 IGLC2P0DOY2 106 aa14.65□□□□□ -0.06
HDAC4-209ENST00000487617 RRN3P1Q2M238 152 aa14.65□□□□□ -0.06
HDAC4-209ENST00000487617 LGALS9CQ6DKI2 356 aa14.65□□□□□ -0.06
HDAC4-209ENST00000487617 THAP6Q8TBB0 222 aa14.65□□□□□ -0.06
HDAC4-209ENST00000487617 NPCDR1Q9BY65 106 aa14.65□□□□□ -0.06
HDAC4-209ENST00000487617 DEFB131BA0A096LNP1 70 aa14.64□□□□□ -0.07
HDAC4-209ENST00000487617 LOC102723971A0A1B0GUV8 181 aa14.64□□□□□ -0.07
HDAC4-209ENST00000487617 H3BQ15 152 aa14.64□□□□□ -0.07
HDAC4-209ENST00000487617 SLC17A3O00476 420 aa14.64□□□□□ -0.07
HDAC4-209ENST00000487617 CRXO43186 299 aaPredicted RBP14.64□□□□□ -0.07
HDAC4-209ENST00000487617 CLINT1Q14677 625 aa14.64□□□□□ -0.07
HDAC4-209ENST00000487617 BAP18Q8IXM2 172 aa14.64□□□□□ -0.07
HDAC4-209ENST00000487617 GUK1Q16774 197 aa14.63□□□□□ -0.07
HDAC4-209ENST00000487617 SAT2Q96F10 170 aaPredicted RBP14.63□□□□□ -0.07
HDAC4-209ENST00000487617 APLNQ9ULZ1 77 aa14.63□□□□□ -0.07
HDAC4-209ENST00000487617 TRAV12-2A0A075B6T6 113 aa14.62□□□□□ -0.07
HDAC4-209ENST00000487617 TEX48A0A1B0GUV7 120 aa14.62□□□□□ -0.07
HDAC4-209ENST00000487617 FAM222AQ5U5X8 452 aa14.62□□□□□ -0.07
HDAC4-209ENST00000487617 RNF126Q9BV68 326 aa14.62□□□□□ -0.07
HDAC4-209ENST00000487617 DKK2Q9UBU2 259 aa14.62□□□□□ -0.07
HDAC4-209ENST00000487617 YTHDF2Q9Y5A9 579 aaKnown RBP14.62□□□□□ -0.07
HDAC4-209ENST00000487617 IGHV4-4A0A075B6R2 117 aa14.61□□□□□ -0.07
HDAC4-209ENST00000487617 MPC2O95563 127 aa14.61□□□□□ -0.07
HDAC4-209ENST00000487617 PET100P0DJ07 73 aa14.61□□□□□ -0.07
HDAC4-209ENST00000487617 GCSAMLQ5JQS6 135 aa14.61□□□□□ -0.07
HDAC4-209ENST00000487617 ZNF586Q9NXT0 402 aa14.61□□□□□ -0.07
HDAC4-209ENST00000487617 ZNF705GA8MUZ8 300 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-209ENST00000487617 PRAC2D3DTV9 90 aa14.6□□□□□ -0.07
HDAC4-209ENST00000487617 OR10J6PQ8NGY7 276 aa14.6□□□□□ -0.07
HDAC4-209ENST00000487617 NIPSNAP3BQ9BS92 247 aa14.6□□□□□ -0.07
HDAC4-209ENST00000487617 WDR61Q9GZS3 305 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms