RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 LCN15Q6UWW0 184 aa9.49□□□□□ -0.89
PRDM2-208ENST00000487453 FAM110AQ9BQ89 295 aa9.49□□□□□ -0.89
PRDM2-208ENST00000487453 TMEM14CQ9P0S9 112 aa9.49□□□□□ -0.89
PRDM2-208ENST00000487453 NOTCH1P46531 2555 aa9.48□□□□□ -0.89
PRDM2-208ENST00000487453 NOTCH3Q9UM47 2321 aa9.48□□□□□ -0.89
PRDM2-208ENST00000487453 H3BQ15 152 aa9.48□□□□□ -0.89
PRDM2-208ENST00000487453 FRMD6-AS1P0C7T7 363 aa9.48□□□□□ -0.89
PRDM2-208ENST00000487453 GUK1Q16774 197 aa9.48□□□□□ -0.89
PRDM2-208ENST00000487453 BAP18Q8IXM2 172 aa9.48□□□□□ -0.89
PRDM2-208ENST00000487453 RNF182Q8N6D2 247 aa9.48□□□□□ -0.89
PRDM2-208ENST00000487453 BLNKQ8WV28 456 aa9.48□□□□□ -0.89
PRDM2-208ENST00000487453 FAM167A-AS1Q96KT0 104 aa9.48□□□□□ -0.89
PRDM2-208ENST00000487453 C17orf77Q96MU5 243 aa9.48□□□□□ -0.89
PRDM2-208ENST00000487453 PAXXQ9BUH6 204 aa9.48□□□□□ -0.89
PRDM2-208ENST00000487453 OR51M1Q9H341 326 aa9.48□□□□□ -0.89
PRDM2-208ENST00000487453 HRH4Q9H3N8 390 aa9.48□□□□□ -0.89
PRDM2-208ENST00000487453 SLC17A3O00476 420 aa9.47□□□□□ -0.89
PRDM2-208ENST00000487453 SEC11BP0C7V7 166 aa9.47□□□□□ -0.89
PRDM2-208ENST00000487453 IGFL4Q6B9Z1 124 aa9.47□□□□□ -0.89
PRDM2-208ENST00000487453 RPP25LQ8N5L8 163 aaKnown RBP9.47□□□□□ -0.89
PRDM2-208ENST00000487453 STOML3Q8TAV4 291 aa9.47□□□□□ -0.89
PRDM2-208ENST00000487453 TMED6Q8WW62 240 aa9.47□□□□□ -0.89
PRDM2-208ENST00000487453 CITED4Q96RK1 184 aa9.47□□□□□ -0.89
PRDM2-208ENST00000487453 SLC50A1Q9BRV3 221 aa9.47□□□□□ -0.89
PRDM2-208ENST00000487453 ACTR3CQ9C0K3 210 aaPredicted RBP9.47□□□□□ -0.89
PRDM2-208ENST00000487453 RPRMQ9NS64 109 aa9.47□□□□□ -0.89
PRDM2-208ENST00000487453 ZNF586Q9NXT0 402 aa9.47□□□□□ -0.89
PRDM2-208ENST00000487453 KNCNA6PVL3 124 aa9.46□□□□□ -0.9
PRDM2-208ENST00000487453 HIST1H1EP10412 219 aaKnown RBP9.46□□□□□ -0.9
PRDM2-208ENST00000487453 ACTL10Q5JWF8 245 aa9.46□□□□□ -0.9
PRDM2-208ENST00000487453 SLC51BQ86UW2 128 aa9.46□□□□□ -0.9
PRDM2-208ENST00000487453 STHQ8IWL8 128 aa9.46□□□□□ -0.9
PRDM2-208ENST00000487453 IQCF2Q8IXL9 164 aa9.46□□□□□ -0.9
PRDM2-208ENST00000487453 ZNF738Q8NE65 137 aa9.46□□□□□ -0.9
PRDM2-208ENST00000487453 RNF141Q8WVD5 230 aa9.46□□□□□ -0.9
PRDM2-208ENST00000487453 RAB24Q969Q5 203 aa9.46□□□□□ -0.9
PRDM2-208ENST00000487453 ZNF331Q9NQX6 463 aaPredicted RBP9.46□□□□□ -0.9
PRDM2-208ENST00000487453 TRBV19A0A075B6N1 114 aa9.45□□□□□ -0.9
PRDM2-208ENST00000487453 LOC102724200A0A096LPH7 203 aaPredicted RBP9.45□□□□□ -0.9
PRDM2-208ENST00000487453 TRAV8-2A0A0B4J237 113 aa9.45□□□□□ -0.9
PRDM2-208ENST00000487453 A8MZ25 164 aa9.45□□□□□ -0.9
PRDM2-208ENST00000487453 NBEAP1P0C6P0 100 aa9.45□□□□□ -0.9
PRDM2-208ENST00000487453 ARL14EPLP0DKL9 152 aa9.45□□□□□ -0.9
PRDM2-208ENST00000487453 RPL35AP18077 110 aaKnown RBP9.45□□□□□ -0.9
PRDM2-208ENST00000487453 HLA-DMBP28068 263 aa9.45□□□□□ -0.9
PRDM2-208ENST00000487453 DEFB1P60022 68 aa9.45□□□□□ -0.9
PRDM2-208ENST00000487453 EIF5AL1Q6IS14 154 aaKnown RBP9.45□□□□□ -0.9
PRDM2-208ENST00000487453 PQLC2Q6ZP29 291 aa9.45□□□□□ -0.9
PRDM2-208ENST00000487453 SSX7Q7RTT5 188 aa9.45□□□□□ -0.9
PRDM2-208ENST00000487453 FXYD5Q96DB9 178 aa9.45□□□□□ -0.9
PRDM2-208ENST00000487453 ZNF503Q96F45 646 aa9.45□□□□□ -0.9
PRDM2-208ENST00000487453 C20orf173Q96LM9 149 aa9.45□□□□□ -0.9
PRDM2-208ENST00000487453 CTXND1A0A1B0GTU2 59 aa9.44□□□□□ -0.9
PRDM2-208ENST00000487453 RBMY1BA6NDE4 496 aaKnown RBP9.44□□□□□ -0.9
PRDM2-208ENST00000487453 RBMY1EA6NEQ0 496 aaKnown RBP9.44□□□□□ -0.9
PRDM2-208ENST00000487453 UMAD1C9J7I0 102 aa9.44□□□□□ -0.9
PRDM2-208ENST00000487453 F6UB75 175 aa9.44□□□□□ -0.9
PRDM2-208ENST00000487453 BOLA2-SMG1P6H3BVE0 249 aa9.44□□□□□ -0.9
PRDM2-208ENST00000487453 RBMY1DP0C7P1 496 aaKnown RBP9.44□□□□□ -0.9
PRDM2-208ENST00000487453 STAG3L2P0CL84 134 aa9.44□□□□□ -0.9
PRDM2-208ENST00000487453 STAG3L3P0CL85 134 aa9.44□□□□□ -0.9
PRDM2-208ENST00000487453 PDE6HQ13956 83 aa9.44□□□□□ -0.9
PRDM2-208ENST00000487453 ZNF726P1Q15940 193 aa9.44□□□□□ -0.9
PRDM2-208ENST00000487453 EBLN2Q6P2I7 272 aa9.44□□□□□ -0.9
PRDM2-208ENST00000487453 FAM213BQ8TBF2 198 aa9.44□□□□□ -0.9
PRDM2-208ENST00000487453 SAT2Q96F10 170 aaPredicted RBP9.44□□□□□ -0.9
PRDM2-208ENST00000487453 PHYHIPLQ96FC7 376 aa9.44□□□□□ -0.9
PRDM2-208ENST00000487453 AAMDCQ9H7C9 122 aa9.44□□□□□ -0.9
PRDM2-208ENST00000487453 MAP1LC3B2A6NCE7 125 aa9.43□□□□□ -0.9
PRDM2-208ENST00000487453 ZNF253O75346 499 aa9.43□□□□□ -0.9
PRDM2-208ENST00000487453 CXorf1O96002 111 aa9.43□□□□□ -0.9
PRDM2-208ENST00000487453 IGKV3-20P01619 116 aa9.43□□□□□ -0.9
PRDM2-208ENST00000487453 PRB4P10163 310 aaPredicted RBP9.43□□□□□ -0.9
PRDM2-208ENST00000487453 FHITP49789 147 aa9.43□□□□□ -0.9
PRDM2-208ENST00000487453 PSG9Q00887 426 aa9.43□□□□□ -0.9
PRDM2-208ENST00000487453 PSG3Q16557 428 aa9.43□□□□□ -0.9
PRDM2-208ENST00000487453 GDF5OSQ5U4N7 250 aa9.43□□□□□ -0.9
PRDM2-208ENST00000487453 FOXI2Q6ZQN5 318 aa9.43□□□□□ -0.9
PRDM2-208ENST00000487453 ASCL2Q99929 193 aa9.43□□□□□ -0.9
PRDM2-208ENST00000487453 B9D2Q9BPU9 175 aa9.43□□□□□ -0.9
PRDM2-208ENST00000487453 MAP1LC3BQ9GZQ8 125 aa9.43□□□□□ -0.9
PRDM2-208ENST00000487453 SAV1Q9H4B6 383 aaPredicted RBP9.43□□□□□ -0.9
PRDM2-208ENST00000487453 BOLA1Q9Y3E2 137 aa9.43□□□□□ -0.9
PRDM2-208ENST00000487453 SORL1Q92673 2214 aa9.43□□□□□ -0.9
PRDM2-208ENST00000487453 NDUFB4O95168 129 aa9.42□□□□□ -0.9
PRDM2-208ENST00000487453 GCHFRP30047 84 aa9.42□□□□□ -0.9
PRDM2-208ENST00000487453 APOC4P55056 127 aa9.42□□□□□ -0.9
PRDM2-208ENST00000487453 FGF8P55075 233 aaPredicted RBP9.42□□□□□ -0.9
PRDM2-208ENST00000487453 RANP62826 216 aaKnown RBP9.42□□□□□ -0.9
PRDM2-208ENST00000487453 ICAM4Q14773 271 aa9.42□□□□□ -0.9
PRDM2-208ENST00000487453 TRPT1Q86TN4 253 aaKnown RBP9.42□□□□□ -0.9
PRDM2-208ENST00000487453 EXOC3-AS1Q8N2X6 119 aa9.42□□□□□ -0.9
PRDM2-208ENST00000487453 OR4B1Q8NGF8 309 aa9.42□□□□□ -0.9
PRDM2-208ENST00000487453 RPUSD4Q96CM3 377 aaKnown RBP9.42□□□□□ -0.9
PRDM2-208ENST00000487453 CLEC5AQ9NY25 188 aa9.42□□□□□ -0.9
PRDM2-208ENST00000487453 A0A0J9YX75 114 aa9.41□□□□□ -0.9
PRDM2-208ENST00000487453 ZNF705FA8MVS1 300 aaPredicted RBP9.41□□□□□ -0.9
PRDM2-208ENST00000487453 ZNF705DP0CH99 300 aaPredicted RBP9.41□□□□□ -0.9
PRDM2-208ENST00000487453 ZNF705BP0CI00 300 aaPredicted RBP9.41□□□□□ -0.9
PRDM2-208ENST00000487453 HLA-DRB4P13762 266 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms