RNA–Protein interactions for RNA: ENST00000486480.1

PTPRN-216, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 563 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-216ENST00000486480 SLC50A1Q9BRV3 221 aa14.01□□□□□ -0.17
PTPRN-216ENST00000486480 MRPL32Q9BYC8 188 aaKnown RBP14.01□□□□□ -0.17
PTPRN-216ENST00000486480 HRH4Q9H3N8 390 aa14.01□□□□□ -0.17
PTPRN-216ENST00000486480 EDA2RQ9HAV5 297 aa14.01□□□□□ -0.17
PTPRN-216ENST00000486480 H3BQ15 152 aa14□□□□□ -0.17
PTPRN-216ENST00000486480 SMLR1H3BR10 107 aa14□□□□□ -0.17
PTPRN-216ENST00000486480 GIG44P09565 113 aaPredicted RBP14□□□□□ -0.17
PTPRN-216ENST00000486480 TMEM41BQ5BJD5 291 aa14□□□□□ -0.17
PTPRN-216ENST00000486480 EBLN2Q6P2I7 272 aa14□□□□□ -0.17
PTPRN-216ENST00000486480 MIR17HGQ75NE6 70 aa14□□□□□ -0.17
PTPRN-216ENST00000486480 TMEM14CQ9P0S9 112 aa14□□□□□ -0.17
PTPRN-216ENST00000486480 TIMM9Q9Y5J7 89 aa14□□□□□ -0.17
PTPRN-216ENST00000486480 RFNGQ9Y644 331 aa14□□□□□ -0.17
PTPRN-216ENST00000486480 A0A0J9YX75 114 aa13.99□□□□□ -0.17
PTPRN-216ENST00000486480 H3BTX0 84 aa13.99□□□□□ -0.17
PTPRN-216ENST00000486480 SLC17A3O00476 420 aa13.99□□□□□ -0.17
PTPRN-216ENST00000486480 HLA-DMBP28068 263 aa13.99□□□□□ -0.17
PTPRN-216ENST00000486480 GUK1Q16774 197 aa13.99□□□□□ -0.17
PTPRN-216ENST00000486480 ZNF738Q8NE65 137 aa13.99□□□□□ -0.17
PTPRN-216ENST00000486480 FAM167A-AS1Q96KT0 104 aa13.99□□□□□ -0.17
PTPRN-216ENST00000486480 SLC25A2Q9BXI2 301 aa13.99□□□□□ -0.17
PTPRN-216ENST00000486480 ZNF331Q9NQX6 463 aaPredicted RBP13.99□□□□□ -0.17
PTPRN-216ENST00000486480 FUT9Q9Y231 359 aa13.99□□□□□ -0.17
PTPRN-216ENST00000486480 ARPC5O15511 151 aa13.98□□□□□ -0.17
PTPRN-216ENST00000486480 IGKV3-20P01619 116 aa13.98□□□□□ -0.17
PTPRN-216ENST00000486480 PYYP10082 97 aa13.98□□□□□ -0.17
PTPRN-216ENST00000486480 NUTF2P61970 127 aaKnown RBP13.98□□□□□ -0.17
PTPRN-216ENST00000486480 PSG3Q16557 428 aa13.98□□□□□ -0.17
PTPRN-216ENST00000486480 HSD17B11Q8NBQ5 300 aa13.98□□□□□ -0.17
PTPRN-216ENST00000486480 CLUHP3Q96NS8 147 aa13.98□□□□□ -0.17
PTPRN-216ENST00000486480 ZNF586Q9NXT0 402 aa13.98□□□□□ -0.17
PTPRN-216ENST00000486480 HIST1H1EP10412 219 aaKnown RBP13.97□□□□□ -0.17
PTPRN-216ENST00000486480 Q6ZNX1 250 aa13.97□□□□□ -0.17
PTPRN-216ENST00000486480 OR4B1Q8NGF8 309 aa13.97□□□□□ -0.17
PTPRN-216ENST00000486480 SAT2Q96F10 170 aaPredicted RBP13.97□□□□□ -0.17
PTPRN-216ENST00000486480 A8MTW9 85 aa13.96□□□□□ -0.17
PTPRN-216ENST00000486480 RHOBP62745 196 aa13.96□□□□□ -0.17
PTPRN-216ENST00000486480 RPL7L1Q6DKI1 246 aaKnown RBP13.96□□□□□ -0.17
PTPRN-216ENST00000486480 PSMG3Q9BT73 122 aaPredicted RBP13.96□□□□□ -0.17
PTPRN-216ENST00000486480 TRBV19A0A075B6N1 114 aa13.95□□□□□ -0.18
PTPRN-216ENST00000486480 ZNF253O75346 499 aa13.95□□□□□ -0.18
PTPRN-216ENST00000486480 ATP6V0CP27449 155 aa13.95□□□□□ -0.18
PTPRN-216ENST00000486480 CNN1P51911 297 aaKnown RBP13.95□□□□□ -0.18
PTPRN-216ENST00000486480 ACOT6Q3I5F7 207 aaPredicted RBP13.95□□□□□ -0.18
PTPRN-216ENST00000486480 OR2G3Q8NGZ4 309 aa13.95□□□□□ -0.18
PTPRN-216ENST00000486480 RPUSD4Q96CM3 377 aaKnown RBP13.95□□□□□ -0.18
PTPRN-216ENST00000486480 RARRES2Q99969 163 aa13.95□□□□□ -0.18
PTPRN-216ENST00000486480 C1QTNF4Q9BXJ3 329 aa13.95□□□□□ -0.18
PTPRN-216ENST00000486480 CLEC5AQ9NY25 188 aa13.95□□□□□ -0.18
PTPRN-216ENST00000486480 XCL2Q9UBD3 114 aa13.95□□□□□ -0.18
PTPRN-216ENST00000486480 BORCS7-ASMTA0A0B4J1R7 106 aa13.94□□□□□ -0.18
PTPRN-216ENST00000486480 DUSP14O95147 198 aaKnown RBP13.94□□□□□ -0.18
PTPRN-216ENST00000486480 ZNF705DP0CH99 300 aaPredicted RBP13.94□□□□□ -0.18
PTPRN-216ENST00000486480 ZNF705BP0CI00 300 aaPredicted RBP13.94□□□□□ -0.18
PTPRN-216ENST00000486480 M6PRP20645 277 aa13.94□□□□□ -0.18
PTPRN-216ENST00000486480 RAB2AP61019 212 aa13.94□□□□□ -0.18
PTPRN-216ENST00000486480 PDE6HQ13956 83 aa13.94□□□□□ -0.18
PTPRN-216ENST00000486480 CSNK1G2-AS1Q8NCQ2 148 aa13.94□□□□□ -0.18
PTPRN-216ENST00000486480 OR8A1Q8NGG7 326 aa13.94□□□□□ -0.18
PTPRN-216ENST00000486480 OR11H2Q8NH07 326 aa13.94□□□□□ -0.18
PTPRN-216ENST00000486480 MUC7Q8TAX7 377 aa13.94□□□□□ -0.18
PTPRN-216ENST00000486480 MFFQ9GZY8 342 aa13.94□□□□□ -0.18
PTPRN-216ENST00000486480 SLC35B3Q9H1N7 401 aa13.94□□□□□ -0.18
PTPRN-216ENST00000486480 OR51M1Q9H341 326 aa13.94□□□□□ -0.18
PTPRN-216ENST00000486480 OR7C2O60412 319 aa13.93□□□□□ -0.18
PTPRN-216ENST00000486480 NDUFB4O95168 129 aa13.93□□□□□ -0.18
PTPRN-216ENST00000486480 PRB4P10163 310 aaPredicted RBP13.93□□□□□ -0.18
PTPRN-216ENST00000486480 FXYD7P58549 80 aa13.93□□□□□ -0.18
PTPRN-216ENST00000486480 TAS2R45P59539 299 aa13.93□□□□□ -0.18
PTPRN-216ENST00000486480 PSG9Q00887 426 aa13.93□□□□□ -0.18
PTPRN-216ENST00000486480 KHDC3LQ587J8 217 aa13.93□□□□□ -0.18
PTPRN-216ENST00000486480 AMTNQ6UX39 209 aa13.93□□□□□ -0.18
PTPRN-216ENST00000486480 OR11H4Q8NGC9 324 aa13.93□□□□□ -0.18
PTPRN-216ENST00000486480 BLNKQ8WV28 456 aa13.93□□□□□ -0.18
PTPRN-216ENST00000486480 FXYD5Q96DB9 178 aa13.93□□□□□ -0.18
PTPRN-216ENST00000486480 PAXXQ9BUH6 204 aa13.93□□□□□ -0.18
PTPRN-216ENST00000486480 SH3BGRL3Q9H299 93 aa13.93□□□□□ -0.18
PTPRN-216ENST00000486480 DNAH7Q8WXX0 4024 aa13.92□□□□□ -0.18
PTPRN-216ENST00000486480 A0A0J9YWU9 116 aa13.92□□□□□ -0.18
PTPRN-216ENST00000486480 ZNF705FA8MVS1 300 aaPredicted RBP13.92□□□□□ -0.18
PTPRN-216ENST00000486480 TAAR5O14804 337 aa13.92□□□□□ -0.18
PTPRN-216ENST00000486480 OR10J4P0C629 311 aa13.92□□□□□ -0.18
PTPRN-216ENST00000486480 HIST1H1AQ02539 215 aaPredicted RBP13.92□□□□□ -0.18
PTPRN-216ENST00000486480 ZNF345Q14585 488 aa13.92□□□□□ -0.18
PTPRN-216ENST00000486480 ZNF503Q96F45 646 aa13.92□□□□□ -0.18
PTPRN-216ENST00000486480 HMSDA8MTL9 139 aa13.91□□□□□ -0.18
PTPRN-216ENST00000486480 NBEAP1P0C6P0 100 aa13.91□□□□□ -0.18
PTPRN-216ENST00000486480 UBE2L3P68036 154 aaKnown RBP13.91□□□□□ -0.18
PTPRN-216ENST00000486480 SERF2P84101 59 aa13.91□□□□□ -0.18
PTPRN-216ENST00000486480 FAM122CQ6P4D5 195 aa13.91□□□□□ -0.18
PTPRN-216ENST00000486480 OR10G4Q8NGN3 311 aa13.91□□□□□ -0.18
PTPRN-216ENST00000486480 OR10G9Q8NGN4 311 aa13.91□□□□□ -0.18
PTPRN-216ENST00000486480 OR10G7Q8NGN6 311 aa13.91□□□□□ -0.18
PTPRN-216ENST00000486480 RNF141Q8WVD5 230 aa13.91□□□□□ -0.18
PTPRN-216ENST00000486480 GNPNAT1Q96EK6 184 aaPredicted RBP13.91□□□□□ -0.18
PTPRN-216ENST00000486480 MRPL53Q96EL3 112 aaKnown RBP13.91□□□□□ -0.18
PTPRN-216ENST00000486480 ST6GAL2Q96JF0 529 aa13.91□□□□□ -0.18
PTPRN-216ENST00000486480 A0A1W2PPV4 95 aa13.9□□□□□ -0.18
PTPRN-216ENST00000486480 ZNF705EA8MWA4 302 aaPredicted RBP13.9□□□□□ -0.18
PTPRN-216ENST00000486480 PRAC2D3DTV9 90 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms