RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 ACTL10Q5JWF8 245 aa9.45□□□□□ -0.9
SSR4-211ENST00000486204 IGFL4Q6B9Z1 124 aa9.45□□□□□ -0.9
SSR4-211ENST00000486204 BPIFA4PQ86YQ2 179 aa9.45□□□□□ -0.9
SSR4-211ENST00000486204 ZNF709Q8N972 641 aa9.45□□□□□ -0.9
SSR4-211ENST00000486204 SCGB1C1Q8TD33 95 aa9.45□□□□□ -0.9
SSR4-211ENST00000486204 FAM167A-AS1Q96KT0 104 aa9.45□□□□□ -0.9
SSR4-211ENST00000486204 C16orf92Q96LL3 132 aa9.45□□□□□ -0.9
SSR4-211ENST00000486204 H3BMM0 161 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 H3BQ15 152 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 SLC17A3O00476 420 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 UBE2CO00762 179 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 ARPC5O15511 151 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 LY6G6CO95867 125 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 SNRPCP09234 159 aaKnown RBP9.44□□□□□ -0.9
SSR4-211ENST00000486204 GIG44P09565 113 aaPredicted RBP9.44□□□□□ -0.9
SSR4-211ENST00000486204 HLA-DRB4P13762 266 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 CXCL2P19875 107 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 C4BPBP20851 252 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 HLA-DMBP28068 263 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 ZNF266Q14584 549 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 DEFB135Q30KP9 77 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 FFAR4Q5NUL3 377 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 FAM78BQ5VT40 261 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 Q6ZWC4 215 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 MIR17HGQ75NE6 70 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 STHQ8IWL8 128 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 RNF182Q8N6D2 247 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 INO80EQ8NBZ0 244 aaPredicted RBP9.44□□□□□ -0.9
SSR4-211ENST00000486204 OR11H4Q8NGC9 324 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 LINC00052Q96N35 136 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 OVOL2Q9BRP0 275 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 SLC25A2Q9BXI2 301 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 SAV1Q9H4B6 383 aaPredicted RBP9.44□□□□□ -0.9
SSR4-211ENST00000486204 ZNF331Q9NQX6 463 aaPredicted RBP9.44□□□□□ -0.9
SSR4-211ENST00000486204 TMEM14CQ9P0S9 112 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 TIMM9Q9Y5J7 89 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 HLA-DRB4X5D2U9 266 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 KMT2AQ03164 3969 aa9.44□□□□□ -0.9
SSR4-211ENST00000486204 A8MTW9 85 aa9.43□□□□□ -0.9
SSR4-211ENST00000486204 F6UB75 175 aa9.43□□□□□ -0.9
SSR4-211ENST00000486204 H3BTX0 84 aa9.43□□□□□ -0.9
SSR4-211ENST00000486204 LCN15Q6UWW0 184 aa9.43□□□□□ -0.9
SSR4-211ENST00000486204 FOXI2Q6ZQN5 318 aa9.43□□□□□ -0.9
SSR4-211ENST00000486204 HSD17B11Q8NBQ5 300 aa9.43□□□□□ -0.9
SSR4-211ENST00000486204 SAT2Q96F10 170 aaPredicted RBP9.43□□□□□ -0.9
SSR4-211ENST00000486204 ST6GAL2Q96JF0 529 aa9.43□□□□□ -0.9
SSR4-211ENST00000486204 MRPL32Q9BYC8 188 aaKnown RBP9.43□□□□□ -0.9
SSR4-211ENST00000486204 CSTL1Q9H114 145 aa9.43□□□□□ -0.9
SSR4-211ENST00000486204 HRH4Q9H3N8 390 aa9.43□□□□□ -0.9
SSR4-211ENST00000486204 ZNF586Q9NXT0 402 aa9.43□□□□□ -0.9
SSR4-211ENST00000486204 FUT9Q9Y231 359 aa9.43□□□□□ -0.9
SSR4-211ENST00000486204 TP53TG1Q9Y2A0 90 aa9.43□□□□□ -0.9
SSR4-211ENST00000486204 A0A0J9YX75 114 aa9.42□□□□□ -0.9
SSR4-211ENST00000486204 PYYP10082 97 aa9.42□□□□□ -0.9
SSR4-211ENST00000486204 SPP1P10451 314 aa9.42□□□□□ -0.9
SSR4-211ENST00000486204 ATP6V0CP27449 155 aa9.42□□□□□ -0.9
SSR4-211ENST00000486204 RPL7L1Q6DKI1 246 aaKnown RBP9.42□□□□□ -0.9
SSR4-211ENST00000486204 OR2G3Q8NGZ4 309 aa9.42□□□□□ -0.9
SSR4-211ENST00000486204 RNF183Q96D59 192 aa9.42□□□□□ -0.9
SSR4-211ENST00000486204 CLUHP3Q96NS8 147 aa9.42□□□□□ -0.9
SSR4-211ENST00000486204 SLC50A1Q9BRV3 221 aa9.42□□□□□ -0.9
SSR4-211ENST00000486204 PSMG3Q9BT73 122 aaPredicted RBP9.42□□□□□ -0.9
SSR4-211ENST00000486204 RPRMQ9NS64 109 aa9.42□□□□□ -0.9
SSR4-211ENST00000486204 HMSDA8MTL9 139 aa9.41□□□□□ -0.9
SSR4-211ENST00000486204 ZNF253O75346 499 aa9.41□□□□□ -0.9
SSR4-211ENST00000486204 CA1P00915 261 aaPredicted RBP9.41□□□□□ -0.9
SSR4-211ENST00000486204 RAB2AP61019 212 aa9.41□□□□□ -0.9
SSR4-211ENST00000486204 ZNF345Q14585 488 aa9.41□□□□□ -0.9
SSR4-211ENST00000486204 MORN3Q6PF18 240 aaPredicted RBP9.41□□□□□ -0.9
SSR4-211ENST00000486204 ZNF503Q96F45 646 aa9.41□□□□□ -0.9
SSR4-211ENST00000486204 MFFQ9GZY8 342 aa9.41□□□□□ -0.9
SSR4-211ENST00000486204 SH3BGRL3Q9H299 93 aa9.41□□□□□ -0.9
SSR4-211ENST00000486204 CYTL1Q9NRR1 136 aa9.41□□□□□ -0.9
SSR4-211ENST00000486204 TRBV19A0A075B6N1 114 aa9.4□□□□□ -0.9
SSR4-211ENST00000486204 SPRY2O43597 315 aa9.4□□□□□ -0.9
SSR4-211ENST00000486204 NDUFB4O95168 129 aa9.4□□□□□ -0.9
SSR4-211ENST00000486204 HIST1H1EP10412 219 aaKnown RBP9.4□□□□□ -0.9
SSR4-211ENST00000486204 M6PRP20645 277 aa9.4□□□□□ -0.9
SSR4-211ENST00000486204 PSG3Q16557 428 aa9.4□□□□□ -0.9
SSR4-211ENST00000486204 GUK1Q16774 197 aa9.4□□□□□ -0.9
SSR4-211ENST00000486204 AMTNQ6UX39 209 aa9.4□□□□□ -0.9
SSR4-211ENST00000486204 KCNRGQ8N5I3 272 aa9.4□□□□□ -0.9
SSR4-211ENST00000486204 CSNK1G2-AS1Q8NCQ2 148 aa9.4□□□□□ -0.9
SSR4-211ENST00000486204 hCG_2014768A0A024R1R8 64 aa9.39□□□□□ -0.91
SSR4-211ENST00000486204 EIF3GO75821 320 aaKnown RBP eCLIP9.39□□□□□ -0.91
SSR4-211ENST00000486204 RHOBP62745 196 aa9.39□□□□□ -0.91
SSR4-211ENST00000486204 ACOT6Q3I5F7 207 aaPredicted RBP9.39□□□□□ -0.91
SSR4-211ENST00000486204 TCTE3Q8IZS6 198 aa9.39□□□□□ -0.91
SSR4-211ENST00000486204 ZNF738Q8NE65 137 aa9.39□□□□□ -0.91
SSR4-211ENST00000486204 FXYD5Q96DB9 178 aa9.39□□□□□ -0.91
SSR4-211ENST00000486204 OR51M1Q9H341 326 aa9.39□□□□□ -0.91
SSR4-211ENST00000486204 BORCS7-ASMTA0A0B4J1R7 106 aa9.38□□□□□ -0.91
SSR4-211ENST00000486204 TAAR5O14804 337 aa9.38□□□□□ -0.91
SSR4-211ENST00000486204 IGKV3-20P01619 116 aa9.38□□□□□ -0.91
SSR4-211ENST00000486204 ZNF705DP0CH99 300 aaPredicted RBP9.38□□□□□ -0.91
SSR4-211ENST00000486204 ZNF705BP0CI00 300 aaPredicted RBP9.38□□□□□ -0.91
SSR4-211ENST00000486204 PRB4P10163 310 aaPredicted RBP9.38□□□□□ -0.91
SSR4-211ENST00000486204 CNN1P51911 297 aaKnown RBP9.38□□□□□ -0.91
SSR4-211ENST00000486204 SERF2P84101 59 aa9.38□□□□□ -0.91
SSR4-211ENST00000486204 PDE6HQ13956 83 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms