RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 UFC1Q9Y3C8 167 aa10.98□□□□□ -0.65
COL9A1-207ENST00000486080 TMEM213A2RRL7 107 aa10.98□□□□□ -0.65
COL9A1-207ENST00000486080 PGPA6NDG6 321 aa10.98□□□□□ -0.65
COL9A1-207ENST00000486080 F6UZH7 168 aa10.98□□□□□ -0.65
COL9A1-207ENST00000486080 ZNF674Q2M3X9 581 aa10.98□□□□□ -0.65
COL9A1-207ENST00000486080 REC114Q7Z4M0 266 aa10.98□□□□□ -0.65
COL9A1-207ENST00000486080 DPF1Q92782 380 aa10.98□□□□□ -0.65
COL9A1-207ENST00000486080 RHPN1-AS1Q9BWJ2 59 aa10.98□□□□□ -0.65
COL9A1-207ENST00000486080 SMPXQ9UHP9 88 aa10.98□□□□□ -0.65
COL9A1-207ENST00000486080 WNK1Q9H4A3 2382 aa10.97□□□□□ -0.65
COL9A1-207ENST00000486080 ZNF785A8K8V0 405 aa10.97□□□□□ -0.65
COL9A1-207ENST00000486080 ATF4P18848 351 aaPredicted RBP10.97□□□□□ -0.65
COL9A1-207ENST00000486080 SIGLEC15Q6ZMC9 328 aa10.97□□□□□ -0.65
COL9A1-207ENST00000486080 C1QL4Q86Z23 238 aa10.97□□□□□ -0.65
COL9A1-207ENST00000486080 TENM1Q9UKZ4 2725 aa10.97□□□□□ -0.65
COL9A1-207ENST00000486080 ADARB2-AS1A8MUL3 147 aa10.96□□□□□ -0.65
COL9A1-207ENST00000486080 LGALS9O00182 355 aa10.96□□□□□ -0.65
COL9A1-207ENST00000486080 CHEK1O14757 476 aa10.96□□□□□ -0.65
COL9A1-207ENST00000486080 NDUFS6O75380 124 aaKnown RBP10.96□□□□□ -0.65
COL9A1-207ENST00000486080 PRB4P10163 310 aaPredicted RBP10.96□□□□□ -0.65
COL9A1-207ENST00000486080 GALR1P47211 349 aa10.96□□□□□ -0.65
COL9A1-207ENST00000486080 GNG5P63218 68 aa10.96□□□□□ -0.65
COL9A1-207ENST00000486080 GPR82Q96P67 336 aa10.96□□□□□ -0.65
COL9A1-207ENST00000486080 NKX6-2Q9C056 277 aaPredicted RBP10.96□□□□□ -0.65
COL9A1-207ENST00000486080 PARLQ9H300 379 aa10.96□□□□□ -0.65
COL9A1-207ENST00000486080 A8MWP6 167 aa10.95□□□□□ -0.66
COL9A1-207ENST00000486080 SLC25A5P05141 298 aaKnown RBP10.95□□□□□ -0.66
COL9A1-207ENST00000486080 IGFL4Q6B9Z1 124 aa10.95□□□□□ -0.66
COL9A1-207ENST00000486080 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.95□□□□□ -0.66
COL9A1-207ENST00000486080 DLX4Q92988 240 aaPredicted RBP10.95□□□□□ -0.66
COL9A1-207ENST00000486080 C11orf52Q96A22 123 aa10.95□□□□□ -0.66
COL9A1-207ENST00000486080 SMIM7Q9BQ49 75 aa10.95□□□□□ -0.66
COL9A1-207ENST00000486080 OTORQ9NRC9 128 aa10.95□□□□□ -0.66
COL9A1-207ENST00000486080 A0A1W2PS18 150 aa10.95□□□□□ -0.66
COL9A1-207ENST00000486080 ZNF727A8MUV8 499 aa10.95□□□□□ -0.66
COL9A1-207ENST00000486080 PDE6HQ13956 83 aa10.95□□□□□ -0.66
COL9A1-207ENST00000486080 ATRAIDQ6UW56 229 aa10.95□□□□□ -0.66
COL9A1-207ENST00000486080 GRAMD2BQ96HH9 432 aa10.95□□□□□ -0.66
COL9A1-207ENST00000486080 EPDR1Q9UM22 224 aa10.95□□□□□ -0.66
COL9A1-207ENST00000486080 RPH3ALQ9UNE2 315 aa10.95□□□□□ -0.66
COL9A1-207ENST00000486080 A0A087X0K7 114 aa10.94□□□□□ -0.66
COL9A1-207ENST00000486080 A0A1B0GUS0 222 aa10.94□□□□□ -0.66
COL9A1-207ENST00000486080 C2orf70A6NJV1 201 aa10.94□□□□□ -0.66
COL9A1-207ENST00000486080 CCL24O00175 119 aa10.94□□□□□ -0.66
COL9A1-207ENST00000486080 NSUN5P1Q3KNT7 163 aa10.94□□□□□ -0.66
COL9A1-207ENST00000486080 C2CD4CQ8TF44 421 aa10.94□□□□□ -0.66
COL9A1-207ENST00000486080 LINC00479Q96M42 142 aa10.94□□□□□ -0.66
COL9A1-207ENST00000486080 ATRQ13535 2644 aa10.94□□□□□ -0.66
COL9A1-207ENST00000486080 PEX7O00628 323 aa10.93□□□□□ -0.66
COL9A1-207ENST00000486080 CBLN1P23435 193 aa10.93□□□□□ -0.66
COL9A1-207ENST00000486080 HLA-DMBP28068 263 aa10.93□□□□□ -0.66
COL9A1-207ENST00000486080 FHL3Q13643 280 aa10.93□□□□□ -0.66
COL9A1-207ENST00000486080 ADAMTSL5Q6ZMM2 481 aa10.93□□□□□ -0.66
COL9A1-207ENST00000486080 C5orf17Q8NAS9 161 aa10.93□□□□□ -0.66
COL9A1-207ENST00000486080 TRBV20OR9-2A0A075B6H5 130 aa10.93□□□□□ -0.66
COL9A1-207ENST00000486080 M0R3E3 92 aa10.93□□□□□ -0.66
COL9A1-207ENST00000486080 RPL35P42766 123 aaKnown RBP10.93□□□□□ -0.66
COL9A1-207ENST00000486080 LYPD1Q8N2G4 141 aa10.93□□□□□ -0.66
COL9A1-207ENST00000486080 SVBPQ8N300 66 aa10.93□□□□□ -0.66
COL9A1-207ENST00000486080 NIPSNAP3BQ9BS92 247 aa10.93□□□□□ -0.66
COL9A1-207ENST00000486080 ZNF331Q9NQX6 463 aaPredicted RBP10.93□□□□□ -0.66
COL9A1-207ENST00000486080 IGKV3-7A0A075B6H7 116 aa10.92□□□□□ -0.66
COL9A1-207ENST00000486080 SCO1O75880 301 aa10.92□□□□□ -0.66
COL9A1-207ENST00000486080 FOLR2P14207 255 aa10.92□□□□□ -0.66
COL9A1-207ENST00000486080 RPL11P62913 178 aaKnown RBP10.92□□□□□ -0.66
COL9A1-207ENST00000486080 PSG9Q00887 426 aa10.92□□□□□ -0.66
COL9A1-207ENST00000486080 FOXL1Q12952 345 aa10.92□□□□□ -0.66
COL9A1-207ENST00000486080 RNF182Q8N6D2 247 aa10.92□□□□□ -0.66
COL9A1-207ENST00000486080 OR9G4Q8NGQ1 327 aa10.92□□□□□ -0.66
COL9A1-207ENST00000486080 TRAV8-2A0A0B4J237 113 aa10.91□□□□□ -0.66
COL9A1-207ENST00000486080 TRAV34A0A0B4J273 112 aa10.91□□□□□ -0.66
COL9A1-207ENST00000486080 HELTA6NFD8 242 aa10.91□□□□□ -0.66
COL9A1-207ENST00000486080 PGPEP1LA6NFU8 196 aa10.91□□□□□ -0.66
COL9A1-207ENST00000486080 ZNF253O75346 499 aa10.91□□□□□ -0.66
COL9A1-207ENST00000486080 TCRAP04437 139 aa10.91□□□□□ -0.66
COL9A1-207ENST00000486080 FAM74A3Q4VXF1 159 aa10.91□□□□□ -0.66
COL9A1-207ENST00000486080 TCF24Q7RTU0 167 aa10.91□□□□□ -0.66
COL9A1-207ENST00000486080 CMTM2Q8TAZ6 248 aa10.91□□□□□ -0.66
COL9A1-207ENST00000486080 HIST1H2BAQ96A08 127 aa10.91□□□□□ -0.66
COL9A1-207ENST00000486080 SGK494Q96LW2 274 aa10.91□□□□□ -0.66
COL9A1-207ENST00000486080 AAMDCQ9H7C9 122 aa10.91□□□□□ -0.66
COL9A1-207ENST00000486080 MLXQ9UH92 298 aa10.91□□□□□ -0.66
COL9A1-207ENST00000486080 ZNF705FA8MVS1 300 aaPredicted RBP10.91□□□□□ -0.66
COL9A1-207ENST00000486080 M0R036 132 aa10.91□□□□□ -0.66
COL9A1-207ENST00000486080 AKR1C3P42330 323 aa10.91□□□□□ -0.66
COL9A1-207ENST00000486080 TMEM241Q24JQ0 296 aa10.91□□□□□ -0.66
COL9A1-207ENST00000486080 AWAT1Q58HT5 328 aa10.91□□□□□ -0.66
COL9A1-207ENST00000486080 CLRN3Q8NCR9 226 aa10.91□□□□□ -0.66
COL9A1-207ENST00000486080 TVP23CQ96ET8 276 aa10.91□□□□□ -0.66
COL9A1-207ENST00000486080 TCEAL7Q9BRU2 100 aa10.91□□□□□ -0.66
COL9A1-207ENST00000486080 SDF2L1Q9HCN8 221 aa10.91□□□□□ -0.66
COL9A1-207ENST00000486080 AURKAIP1Q9NWT8 199 aaPredicted RBP10.91□□□□□ -0.66
COL9A1-207ENST00000486080 NAT8Q9UHE5 227 aa10.91□□□□□ -0.66
COL9A1-207ENST00000486080 ISLRO14498 428 aa10.9□□□□□ -0.66
COL9A1-207ENST00000486080 CSN3P07498 182 aa10.9□□□□□ -0.66
COL9A1-207ENST00000486080 GOLT1AQ6ZVE7 132 aa10.9□□□□□ -0.66
COL9A1-207ENST00000486080 PRIMA1Q86XR5 153 aa10.9□□□□□ -0.66
COL9A1-207ENST00000486080 NDUFA11Q86Y39 141 aa10.9□□□□□ -0.66
COL9A1-207ENST00000486080 ATG101Q9BSB4 218 aa10.9□□□□□ -0.66
COL9A1-207ENST00000486080 PEMTQ9UBM1 199 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms