RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 DKK1O94907 266 aa8.57□□□□□ -1.04
SRGAP3-207ENST00000485983 GAGE12FP0CL80 117 aa8.57□□□□□ -1.04
SRGAP3-207ENST00000485983 GAGE12GP0CL81 117 aa8.57□□□□□ -1.04
SRGAP3-207ENST00000485983 GAGE12IP0CL82 117 aa8.57□□□□□ -1.04
SRGAP3-207ENST00000485983 TCTEX1D4Q5JR98 221 aa8.57□□□□□ -1.04
SRGAP3-207ENST00000485983 AGMATQ9BSE5 352 aa8.57□□□□□ -1.04
SRGAP3-207ENST00000485983 NDUFB8O95169 186 aa8.57□□□□□ -1.04
SRGAP3-207ENST00000485983 SPINK13Q1W4C9 94 aa8.57□□□□□ -1.04
SRGAP3-207ENST00000485983 SPXQ9BT56 116 aa8.57□□□□□ -1.04
SRGAP3-207ENST00000485983 SRSF4Q08170 494 aaKnown RBP8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 PDE6HQ13956 83 aa8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 ZNF48Q96MX3 618 aaPredicted RBP8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 TRBV6-6A0A0A6YYG2 114 aa8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 TNFRSF6BO95407 300 aa8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 NMSQ5H8A3 153 aa8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 IGFL3Q6UXB1 125 aa8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 ARMS2P0C7Q2 107 aa8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 HGFACQ04756 655 aa8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 RBMY1FQ15415 496 aaKnown RBP8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 Q6P435 159 aa8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 ZNF114Q8NC26 417 aa8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 VSIRQ9H7M9 311 aa8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 ROS1P08922 2347 aa8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 CFHR2P36980 270 aa8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 IL17RELQ6ZVW7 336 aa8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 THAP8Q8NA92 274 aa8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 MEGF9Q9H1U4 602 aa8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 BRCA1P38398 1863 aaKnown RBP8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 GREB1LQ9C091 1923 aaPredicted RBP8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 PAX9P55771 341 aa8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 B3GALT5-AS1P59052 145 aa8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 KLF5Q13887 457 aaPredicted RBP8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 SUMO4Q6EEV6 95 aa8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 ZNF625Q96I27 306 aaPredicted RBP8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 SHANK2-AS3Q9BTD1 123 aa8.56□□□□□ -1.04
SRGAP3-207ENST00000485983 RPRMLQ8N4K4 120 aa8.55□□□□□ -1.04
SRGAP3-207ENST00000485983 SLAQ13239 276 aa8.55□□□□□ -1.04
SRGAP3-207ENST00000485983 GAGE2EQ4V326 116 aa8.55□□□□□ -1.04
SRGAP3-207ENST00000485983 GAGE2DQ9UEU5 116 aa8.55□□□□□ -1.04
SRGAP3-207ENST00000485983 ANKRD36A6QL64 1941 aa8.55□□□□□ -1.04
SRGAP3-207ENST00000485983 LINC00473A8K010 186 aa8.55□□□□□ -1.04
SRGAP3-207ENST00000485983 C22orf46C9J442 243 aa8.55□□□□□ -1.04
SRGAP3-207ENST00000485983 ESDP10768 282 aa8.55□□□□□ -1.04
SRGAP3-207ENST00000485983 DOCK7Q96N67 2140 aa8.55□□□□□ -1.04
SRGAP3-207ENST00000485983 IGKV1-5P01602 117 aa8.55□□□□□ -1.04
SRGAP3-207ENST00000485983 RNASE2P10153 161 aaKnown RBP8.55□□□□□ -1.04
SRGAP3-207ENST00000485983 WFDC1Q9HC57 220 aa8.55□□□□□ -1.04
SRGAP3-207ENST00000485983 H0YIZ8 118 aa8.54□□□□□ -1.04
SRGAP3-207ENST00000485983 TMEM14EPQ6UXP3 125 aa8.54□□□□□ -1.04
SRGAP3-207ENST00000485983 TMEM158Q8WZ71 300 aa8.54□□□□□ -1.04
SRGAP3-207ENST00000485983 TMEM243Q9BU79 118 aa8.54□□□□□ -1.04
SRGAP3-207ENST00000485983 IGHV3-16A0A0C4DH30 117 aa8.54□□□□□ -1.04
SRGAP3-207ENST00000485983 PMVKQ15126 192 aa8.54□□□□□ -1.04
SRGAP3-207ENST00000485983 SAMD5Q5TGI4 173 aa8.54□□□□□ -1.04
SRGAP3-207ENST00000485983 C2orf82Q6UX34 121 aa8.54□□□□□ -1.04
SRGAP3-207ENST00000485983 ELANEP08246 267 aa8.54□□□□□ -1.04
SRGAP3-207ENST00000485983 PKIGQ9Y2B9 76 aa8.54□□□□□ -1.04
SRGAP3-207ENST00000485983 USF3Q68DE3 2245 aa8.54□□□□□ -1.04
SRGAP3-207ENST00000485983 NBASA2RRP1 2371 aa8.54□□□□□ -1.04
SRGAP3-207ENST00000485983 NOTCH3Q9UM47 2321 aa8.54□□□□□ -1.04
SRGAP3-207ENST00000485983 A0A087WV48 116 aa8.54□□□□□ -1.04
SRGAP3-207ENST00000485983 LINC00518Q8N0U6 118 aa8.54□□□□□ -1.04
SRGAP3-207ENST00000485983 GLRX5Q86SX6 157 aa8.54□□□□□ -1.04
SRGAP3-207ENST00000485983 IGHV1OR15-1A0A075B7D0 117 aa8.53□□□□□ -1.04
SRGAP3-207ENST00000485983 FNDC10F2Z333 226 aa8.53□□□□□ -1.04
SRGAP3-207ENST00000485983 NTF4P34130 210 aa8.53□□□□□ -1.04
SRGAP3-207ENST00000485983 YPEL3P61236 119 aaPredicted RBP8.53□□□□□ -1.04
SRGAP3-207ENST00000485983 TRAV8-1A0A0A6YYK1 113 aa8.53□□□□□ -1.04
SRGAP3-207ENST00000485983 MRPL27Q9P0M9 148 aaKnown RBP8.53□□□□□ -1.04
SRGAP3-207ENST00000485983 ZNF236Q9UL36 1845 aa8.53□□□□□ -1.04
SRGAP3-207ENST00000485983 G3V318 75 aa8.53□□□□□ -1.04
SRGAP3-207ENST00000485983 NDUFA4O00483 81 aa8.53□□□□□ -1.04
SRGAP3-207ENST00000485983 CLPSP04118 112 aa8.53□□□□□ -1.04
SRGAP3-207ENST00000485983 LHFPL1Q86WI0 220 aa8.53□□□□□ -1.04
SRGAP3-207ENST00000485983 PSME4Q14997 1843 aa8.53□□□□□ -1.04
SRGAP3-207ENST00000485983 H3BMM0 161 aa8.53□□□□□ -1.04
SRGAP3-207ENST00000485983 LY6G6FQ5SQ64 297 aa8.53□□□□□ -1.04
SRGAP3-207ENST00000485983 C1orf194Q5T5A4 169 aa8.53□□□□□ -1.04
SRGAP3-207ENST00000485983 SCN5AQ14524 2016 aa8.53□□□□□ -1.04
SRGAP3-207ENST00000485983 UBE2BP63146 152 aa8.52□□□□□ -1.04
SRGAP3-207ENST00000485983 TCF15Q12870 199 aa8.52□□□□□ -1.04
SRGAP3-207ENST00000485983 PNRC2Q9NPJ4 139 aaKnown RBP8.52□□□□□ -1.04
SRGAP3-207ENST00000485983 KLK9Q9UKQ9 250 aa8.52□□□□□ -1.04
SRGAP3-207ENST00000485983 LY96Q9Y6Y9 160 aa8.52□□□□□ -1.04
SRGAP3-207ENST00000485983 A0A1W2PPI3 338 aa8.52□□□□□ -1.05
SRGAP3-207ENST00000485983 BCL6BQ8N143 479 aaPredicted RBP8.52□□□□□ -1.05
SRGAP3-207ENST00000485983 Q8TCH9 128 aa8.52□□□□□ -1.05
SRGAP3-207ENST00000485983 HEATR1Q9H583 2144 aaKnown RBP8.52□□□□□ -1.05
SRGAP3-207ENST00000485983 TRAV8-3A0A0A6YYJ7 113 aa8.52□□□□□ -1.05
SRGAP3-207ENST00000485983 IGKV1-16P04430 117 aa8.52□□□□□ -1.05
SRGAP3-207ENST00000485983 NBL1P41271 181 aa8.52□□□□□ -1.05
SRGAP3-207ENST00000485983 ZNRF2Q8NHG8 242 aa8.52□□□□□ -1.05
SRGAP3-207ENST00000485983 TSSC4Q9Y5U2 329 aaPredicted RBP8.52□□□□□ -1.05
SRGAP3-207ENST00000485983 DICER1Q9UPY3 1922 aaKnown RBP8.52□□□□□ -1.05
SRGAP3-207ENST00000485983 TRAV1-1A0A0B4J248 108 aa8.52□□□□□ -1.05
SRGAP3-207ENST00000485983 MMP23AO75900 390 aa8.52□□□□□ -1.05
SRGAP3-207ENST00000485983 PFN2P35080 140 aa8.52□□□□□ -1.05
SRGAP3-207ENST00000485983 CDKN1BP46527 198 aa8.52□□□□□ -1.05
SRGAP3-207ENST00000485983 GAGE6Q13070 117 aa8.52□□□□□ -1.05
SRGAP3-207ENST00000485983 RPP25LQ8N5L8 163 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms