RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 GSKIPQ9P0R6 139 aa12.16□□□□□ -0.46
SMC4-216ENST00000485645 ZNF705GA8MUZ8 300 aaPredicted RBP12.15□□□□□ -0.46
SMC4-216ENST00000485645 CCSO14618 274 aa12.15□□□□□ -0.46
SMC4-216ENST00000485645 RTL8CO15255 209 aa12.15□□□□□ -0.46
SMC4-216ENST00000485645 CRXO43186 299 aaPredicted RBP12.15□□□□□ -0.46
SMC4-216ENST00000485645 METTL15P1P0C7V9 234 aa12.15□□□□□ -0.46
SMC4-216ENST00000485645 RNF212Q495C1 297 aa12.15□□□□□ -0.46
SMC4-216ENST00000485645 TMEM88Q6PEY1 159 aa12.15□□□□□ -0.46
SMC4-216ENST00000485645 TMEM14EPQ6UXP3 125 aa12.15□□□□□ -0.46
SMC4-216ENST00000485645 UHRF2Q96PU4 802 aa12.15□□□□□ -0.46
SMC4-216ENST00000485645 IGLV2-18A0A075B6J9 118 aa12.14□□□□□ -0.47
SMC4-216ENST00000485645 LYRM9A8MSI8 78 aa12.14□□□□□ -0.47
SMC4-216ENST00000485645 FNDC10F2Z333 226 aa12.14□□□□□ -0.47
SMC4-216ENST00000485645 CCNKO75909 580 aa12.14□□□□□ -0.47
SMC4-216ENST00000485645 SCGB1D2O95969 90 aa12.14□□□□□ -0.47
SMC4-216ENST00000485645 BAP18Q8IXM2 172 aa12.14□□□□□ -0.47
SMC4-216ENST00000485645 OR10P1Q8NGE3 313 aa12.14□□□□□ -0.47
SMC4-216ENST00000485645 LRRC20Q8TCA0 184 aa12.14□□□□□ -0.47
SMC4-216ENST00000485645 ARL6Q9H0F7 186 aa12.14□□□□□ -0.47
SMC4-216ENST00000485645 MGAT4CQ9UBM8 478 aa12.14□□□□□ -0.47
SMC4-216ENST00000485645 A0A087X0K7 114 aa12.13□□□□□ -0.47
SMC4-216ENST00000485645 BOLA2-SMG1P6H3BVE0 249 aa12.13□□□□□ -0.47
SMC4-216ENST00000485645 MBPP02686 304 aaPredicted RBP12.13□□□□□ -0.47
SMC4-216ENST00000485645 PRM2P04554 102 aa12.13□□□□□ -0.47
SMC4-216ENST00000485645 CXCL3P19876 107 aa12.13□□□□□ -0.47
SMC4-216ENST00000485645 TAS2R30P59541 319 aa12.13□□□□□ -0.47
SMC4-216ENST00000485645 RHOBP62745 196 aa12.13□□□□□ -0.47
SMC4-216ENST00000485645 HIST1H1AQ02539 215 aaPredicted RBP12.13□□□□□ -0.47
SMC4-216ENST00000485645 PSG3Q16557 428 aa12.13□□□□□ -0.47
SMC4-216ENST00000485645 TEPPQ6URK8 271 aa12.13□□□□□ -0.47
SMC4-216ENST00000485645 NRARPQ7Z6K4 114 aa12.13□□□□□ -0.47
SMC4-216ENST00000485645 PPP1R14DQ9NXH3 145 aa12.13□□□□□ -0.47
SMC4-216ENST00000485645 RNF24Q9Y225 148 aa12.13□□□□□ -0.47
SMC4-216ENST00000485645 RCL1Q9Y2P8 373 aaKnown RBP12.13□□□□□ -0.47
SMC4-216ENST00000485645 TRAV12-2A0A075B6T6 113 aa12.12□□□□□ -0.47
SMC4-216ENST00000485645 C5orf51A6NDU8 294 aa12.12□□□□□ -0.47
SMC4-216ENST00000485645 FAM25EA8MYX2 175 aa12.12□□□□□ -0.47
SMC4-216ENST00000485645 K7EPK0 472 aa12.12□□□□□ -0.47
SMC4-216ENST00000485645 TSC22D2O75157 780 aa12.12□□□□□ -0.47
SMC4-216ENST00000485645 TSPOP30536 169 aa12.12□□□□□ -0.47
SMC4-216ENST00000485645 DEFA1P59665 94 aa12.12□□□□□ -0.47
SMC4-216ENST00000485645 DEFA3P59666 94 aa12.12□□□□□ -0.47
SMC4-216ENST00000485645 Q6ZR54 194 aa12.12□□□□□ -0.47
SMC4-216ENST00000485645 C15orf53Q8NAA6 179 aa12.12□□□□□ -0.47
SMC4-216ENST00000485645 OR8A1Q8NGG7 326 aa12.12□□□□□ -0.47
SMC4-216ENST00000485645 ARV1Q9H2C2 271 aa12.12□□□□□ -0.47
SMC4-216ENST00000485645 GPN1Q9HCN4 374 aaPredicted RBP12.12□□□□□ -0.47
SMC4-216ENST00000485645 DYNC1H1Q14204 4646 aaKnown RBP12.11□□□□□ -0.47
SMC4-216ENST00000485645 PKD1P98161 4303 aa12.11□□□□□ -0.47
SMC4-216ENST00000485645 GOSR2O14653 212 aa12.11□□□□□ -0.47
SMC4-216ENST00000485645 DEFB130BP0DP73 79 aa12.11□□□□□ -0.47
SMC4-216ENST00000485645 DEFB130AP0DP74 79 aa12.11□□□□□ -0.47
SMC4-216ENST00000485645 SLC38A11Q08AI6 406 aa12.11□□□□□ -0.47
SMC4-216ENST00000485645 PXDC1Q5TGL8 231 aa12.11□□□□□ -0.47
SMC4-216ENST00000485645 PATE2Q6UY27 113 aa12.11□□□□□ -0.47
SMC4-216ENST00000485645 C2orf50Q96LR7 162 aa12.11□□□□□ -0.47
SMC4-216ENST00000485645 LINC01587Q99440 93 aa12.11□□□□□ -0.47
SMC4-216ENST00000485645 DNAH11Q96DT5 4516 aa12.1□□□□□ -0.47
SMC4-216ENST00000485645 C7orf66A4D0T2 115 aa12.1□□□□□ -0.47
SMC4-216ENST00000485645 AZU1P20160 251 aa12.1□□□□□ -0.47
SMC4-216ENST00000485645 SOHLH1Q5JUK2 328 aa12.1□□□□□ -0.47
SMC4-216ENST00000485645 TMEM256Q8N2U0 113 aa12.1□□□□□ -0.47
SMC4-216ENST00000485645 MARVELD1Q9BSK0 173 aa12.1□□□□□ -0.47
SMC4-216ENST00000485645 NACAE9PAV3 2078 aa12.09□□□□□ -0.47
SMC4-216ENST00000485645 INMT-MINDY4F8WBC2 141 aa12.09□□□□□ -0.47
SMC4-216ENST00000485645 MRPS12O15235 138 aaKnown RBP12.09□□□□□ -0.47
SMC4-216ENST00000485645 PRAF2O60831 178 aa12.09□□□□□ -0.47
SMC4-216ENST00000485645 CXCL2P19875 107 aa12.09□□□□□ -0.47
SMC4-216ENST00000485645 TAS2R60P59551 318 aa12.09□□□□□ -0.47
SMC4-216ENST00000485645 LINC00305Q7Z4B0 112 aa12.09□□□□□ -0.47
SMC4-216ENST00000485645 ZNF546Q86UE3 836 aa12.09□□□□□ -0.47
SMC4-216ENST00000485645 RPUSD4Q96CM3 377 aaKnown RBP12.09□□□□□ -0.47
SMC4-216ENST00000485645 GGACTQ9BVM4 153 aa12.09□□□□□ -0.47
SMC4-216ENST00000485645 PCLOQ9Y6V0 5065 aa12.08□□□□□ -0.48
SMC4-216ENST00000485645 PLAC8L1A1L4L8 177 aa12.08□□□□□ -0.48
SMC4-216ENST00000485645 F5H768 121 aa12.08□□□□□ -0.48
SMC4-216ENST00000485645 AGPAT2O15120 278 aa12.08□□□□□ -0.48
SMC4-216ENST00000485645 MED14OSP0DP75 135 aa12.08□□□□□ -0.48
SMC4-216ENST00000485645 HTN1P15515 57 aa12.08□□□□□ -0.48
SMC4-216ENST00000485645 CDKN1BP46527 198 aa12.08□□□□□ -0.48
SMC4-216ENST00000485645 FAM3BP58499 235 aaPredicted RBP12.08□□□□□ -0.48
SMC4-216ENST00000485645 ARL16Q0P5N6 197 aa12.08□□□□□ -0.48
SMC4-216ENST00000485645 IL15RAQ13261 267 aa12.08□□□□□ -0.48
SMC4-216ENST00000485645 FCN2Q15485 313 aa12.08□□□□□ -0.48
SMC4-216ENST00000485645 LCN15Q6UWW0 184 aa12.08□□□□□ -0.48
SMC4-216ENST00000485645 ATG101Q9BSB4 218 aa12.08□□□□□ -0.48
SMC4-216ENST00000485645 LSM5Q9Y4Y9 91 aaKnown RBP12.08□□□□□ -0.48
SMC4-216ENST00000485645 L7N2F9 121 aa12.07□□□□□ -0.48
SMC4-216ENST00000485645 PRB4P10163 310 aaPredicted RBP12.07□□□□□ -0.48
SMC4-216ENST00000485645 VAMP2P63027 116 aa12.07□□□□□ -0.48
SMC4-216ENST00000485645 BPIFA4PQ86YQ2 179 aa12.07□□□□□ -0.48
SMC4-216ENST00000485645 C16orf74Q96GX8 76 aa12.07□□□□□ -0.48
SMC4-216ENST00000485645 SLC50A1Q9BRV3 221 aa12.07□□□□□ -0.48
SMC4-216ENST00000485645 C11orf1Q9H5F2 150 aa12.07□□□□□ -0.48
SMC4-216ENST00000485645 ZNF331Q9NQX6 463 aaPredicted RBP12.07□□□□□ -0.48
SMC4-216ENST00000485645 CBY3A6NI87 242 aa12.06□□□□□ -0.48
SMC4-216ENST00000485645 COX7A2P2O60397 106 aa12.06□□□□□ -0.48
SMC4-216ENST00000485645 ATP5G1P05496 136 aa12.06□□□□□ -0.48
SMC4-216ENST00000485645 SNRPCP09234 159 aaKnown RBP12.06□□□□□ -0.48
SMC4-216ENST00000485645 ATP5G3P48201 142 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms