RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 SLC25A39Q9BZJ4 359 aaPredicted RBP6.59□□□□□ -1.35
COL8A1-207ENST00000483969 ARV1Q9H2C2 271 aa6.59□□□□□ -1.35
COL8A1-207ENST00000483969 SLC25A22Q9H936 323 aa6.59□□□□□ -1.35
COL8A1-207ENST00000483969 DNAJC4Q9NNZ3 241 aa6.59□□□□□ -1.35
COL8A1-207ENST00000483969 DOK5Q9P104 306 aa6.59□□□□□ -1.35
COL8A1-207ENST00000483969 UBE2L5PA0A1B0GUS4 154 aa6.58□□□□□ -1.36
COL8A1-207ENST00000483969 H3BRN7 92 aa6.58□□□□□ -1.36
COL8A1-207ENST00000483969 IFNA5P01569 189 aa6.58□□□□□ -1.36
COL8A1-207ENST00000483969 GIPP09681 153 aaPredicted RBP6.58□□□□□ -1.36
COL8A1-207ENST00000483969 ZNF688P0C7X2 276 aa6.58□□□□□ -1.36
COL8A1-207ENST00000483969 LYL1P12980 280 aa6.58□□□□□ -1.36
COL8A1-207ENST00000483969 FGF7P21781 194 aa6.58□□□□□ -1.36
COL8A1-207ENST00000483969 C10orf113Q5VZT2 155 aa6.58□□□□□ -1.36
COL8A1-207ENST00000483969 PATE2Q6UY27 113 aa6.58□□□□□ -1.36
COL8A1-207ENST00000483969 STHQ8IWL8 128 aa6.58□□□□□ -1.36
COL8A1-207ENST00000483969 OR11H7Q8NGC8 314 aa6.58□□□□□ -1.36
COL8A1-207ENST00000483969 SCGB1C1Q8TD33 95 aa6.58□□□□□ -1.36
COL8A1-207ENST00000483969 RCHY1Q96PM5 261 aa6.58□□□□□ -1.36
COL8A1-207ENST00000483969 PFDN5Q99471 154 aa6.58□□□□□ -1.36
COL8A1-207ENST00000483969 RSG1Q9BU20 258 aa6.58□□□□□ -1.36
COL8A1-207ENST00000483969 CSTL1Q9H114 145 aa6.58□□□□□ -1.36
COL8A1-207ENST00000483969 MBD2Q9UBB5 411 aa6.58□□□□□ -1.36
COL8A1-207ENST00000483969 HSPB11Q9Y547 144 aa6.58□□□□□ -1.36
COL8A1-207ENST00000483969 C17orf112F2Z3M2 114 aa6.57□□□□□ -1.36
COL8A1-207ENST00000483969 RPL35AP18077 110 aaKnown RBP6.57□□□□□ -1.36
COL8A1-207ENST00000483969 PSMB3P49720 205 aa6.57□□□□□ -1.36
COL8A1-207ENST00000483969 B2MP61769 119 aa6.57□□□□□ -1.36
COL8A1-207ENST00000483969 CLINT1Q14677 625 aa6.57□□□□□ -1.36
COL8A1-207ENST00000483969 OPCMLQ14982 345 aa6.57□□□□□ -1.36
COL8A1-207ENST00000483969 PSMG4Q5JS54 123 aa6.57□□□□□ -1.36
COL8A1-207ENST00000483969 MIC13Q5XKP0 118 aa6.57□□□□□ -1.36
COL8A1-207ENST00000483969 LEMD1Q68G75 181 aa6.57□□□□□ -1.36
COL8A1-207ENST00000483969 Q6ZWC4 215 aa6.57□□□□□ -1.36
COL8A1-207ENST00000483969 LINC00305Q7Z4B0 112 aa6.57□□□□□ -1.36
COL8A1-207ENST00000483969 FAM24BQ8N5W8 94 aa6.57□□□□□ -1.36
COL8A1-207ENST00000483969 LRRC20Q8TCA0 184 aa6.57□□□□□ -1.36
COL8A1-207ENST00000483969 GATAD1Q8WUU5 269 aa6.57□□□□□ -1.36
COL8A1-207ENST00000483969 LINC00052Q96N35 136 aa6.57□□□□□ -1.36
COL8A1-207ENST00000483969 ATP5SQ99766 215 aa6.57□□□□□ -1.36
COL8A1-207ENST00000483969 SCRT1Q9BWW7 348 aa6.57□□□□□ -1.36
COL8A1-207ENST00000483969 SLC25A32Q9H2D1 315 aa6.57□□□□□ -1.36
COL8A1-207ENST00000483969 KCNIP2Q9NS61 270 aa6.57□□□□□ -1.36
COL8A1-207ENST00000483969 SLC39A9Q9NUM3 307 aa6.57□□□□□ -1.36
COL8A1-207ENST00000483969 PXMP4Q9Y6I8 212 aa6.57□□□□□ -1.36
COL8A1-207ENST00000483969 DNAH3Q8TD57 4116 aa6.57□□□□□ -1.36
COL8A1-207ENST00000483969 ISLRO14498 428 aa6.56□□□□□ -1.36
COL8A1-207ENST00000483969 SPATA31B1PQ5VZV4 182 aa6.56□□□□□ -1.36
COL8A1-207ENST00000483969 MORN3Q6PF18 240 aaPredicted RBP6.56□□□□□ -1.36
COL8A1-207ENST00000483969 BPIFA4PQ86YQ2 179 aa6.56□□□□□ -1.36
COL8A1-207ENST00000483969 INO80EQ8NBZ0 244 aaPredicted RBP6.56□□□□□ -1.36
COL8A1-207ENST00000483969 TMEM37Q8WXS4 190 aa6.56□□□□□ -1.36
COL8A1-207ENST00000483969 UHRF2Q96PU4 802 aa6.56□□□□□ -1.36
COL8A1-207ENST00000483969 NPCDR1Q9BY65 106 aa6.56□□□□□ -1.36
COL8A1-207ENST00000483969 WDR61Q9GZS3 305 aaKnown RBP6.56□□□□□ -1.36
COL8A1-207ENST00000483969 KNCNA6PVL3 124 aa6.55□□□□□ -1.36
COL8A1-207ENST00000483969 SPRY2O43597 315 aa6.55□□□□□ -1.36
COL8A1-207ENST00000483969 NUTF2P61970 127 aaKnown RBP6.55□□□□□ -1.36
COL8A1-207ENST00000483969 FOXI1Q12951 378 aa6.55□□□□□ -1.36
COL8A1-207ENST00000483969 TMEM41BQ5BJD5 291 aa6.55□□□□□ -1.36
COL8A1-207ENST00000483969 ACTL10Q5JWF8 245 aa6.55□□□□□ -1.36
COL8A1-207ENST00000483969 EBLN2Q6P2I7 272 aa6.55□□□□□ -1.36
COL8A1-207ENST00000483969 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.55□□□□□ -1.36
COL8A1-207ENST00000483969 SMIM3Q9BZL3 60 aa6.55□□□□□ -1.36
COL8A1-207ENST00000483969 RPRMQ9NS64 109 aa6.55□□□□□ -1.36
COL8A1-207ENST00000483969 TP53TG1Q9Y2A0 90 aa6.55□□□□□ -1.36
COL8A1-207ENST00000483969 A0A087X0K7 114 aa6.54□□□□□ -1.36
COL8A1-207ENST00000483969 SOCS3O14543 225 aa6.54□□□□□ -1.36
COL8A1-207ENST00000483969 SPP1P10451 314 aa6.54□□□□□ -1.36
COL8A1-207ENST00000483969 GUK1Q16774 197 aa6.54□□□□□ -1.36
COL8A1-207ENST00000483969 FOXI2Q6ZQN5 318 aa6.54□□□□□ -1.36
COL8A1-207ENST00000483969 TRPT1Q86TN4 253 aaKnown RBP6.54□□□□□ -1.36
COL8A1-207ENST00000483969 OR2T35Q8NGX2 323 aa6.54□□□□□ -1.36
COL8A1-207ENST00000483969 AQP10Q96PS8 301 aa6.54□□□□□ -1.36
COL8A1-207ENST00000483969 PARD6GQ9BYG4 376 aaPredicted RBP6.54□□□□□ -1.36
COL8A1-207ENST00000483969 CLEC5AQ9NY25 188 aa6.54□□□□□ -1.36
COL8A1-207ENST00000483969 TRAV5A0A0B4J249 113 aa6.53□□□□□ -1.36
COL8A1-207ENST00000483969 H3BMM0 161 aa6.53□□□□□ -1.36
COL8A1-207ENST00000483969 DUSP14O95147 198 aaKnown RBP6.53□□□□□ -1.36
COL8A1-207ENST00000483969 CA1P00915 261 aaPredicted RBP6.53□□□□□ -1.36
COL8A1-207ENST00000483969 CXCL2P19875 107 aa6.53□□□□□ -1.36
COL8A1-207ENST00000483969 ZNF266Q14584 549 aa6.53□□□□□ -1.36
COL8A1-207ENST00000483969 Q5BKY6 102 aa6.53□□□□□ -1.36
COL8A1-207ENST00000483969 FAM78BQ5VT40 261 aa6.53□□□□□ -1.36
COL8A1-207ENST00000483969 RNF183Q96D59 192 aa6.53□□□□□ -1.36
COL8A1-207ENST00000483969 OVOL2Q9BRP0 275 aa6.53□□□□□ -1.36
COL8A1-207ENST00000483969 SLC50A1Q9BRV3 221 aa6.53□□□□□ -1.36
COL8A1-207ENST00000483969 C1QTNF4Q9BXJ3 329 aa6.53□□□□□ -1.36
COL8A1-207ENST00000483969 SAV1Q9H4B6 383 aaPredicted RBP6.53□□□□□ -1.36
COL8A1-207ENST00000483969 FXYD6-FXYD2A0A087WZ82 144 aa6.52□□□□□ -1.37
COL8A1-207ENST00000483969 MRPS12O15235 138 aaKnown RBP6.52□□□□□ -1.37
COL8A1-207ENST00000483969 HLA-DRB4P13762 266 aa6.52□□□□□ -1.37
COL8A1-207ENST00000483969 PSG3Q16557 428 aa6.52□□□□□ -1.37
COL8A1-207ENST00000483969 FFAR4Q5NUL3 377 aa6.52□□□□□ -1.37
COL8A1-207ENST00000483969 LCN15Q6UWW0 184 aa6.52□□□□□ -1.37
COL8A1-207ENST00000483969 C17orf77Q96MU5 243 aa6.52□□□□□ -1.37
COL8A1-207ENST00000483969 RARRES2Q99969 163 aa6.52□□□□□ -1.37
COL8A1-207ENST00000483969 MRPL32Q9BYC8 188 aaKnown RBP6.52□□□□□ -1.37
COL8A1-207ENST00000483969 HRH4Q9H3N8 390 aa6.52□□□□□ -1.37
COL8A1-207ENST00000483969 WFDC1Q9HC57 220 aa6.52□□□□□ -1.37
COL8A1-207ENST00000483969 RETNQ9HD89 108 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms