RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 A0A0J9YX75 114 aa12.14□□□□□ -0.47
HMGN1-214ENST00000482733 FFAR4Q5NUL3 377 aa12.14□□□□□ -0.47
HMGN1-214ENST00000482733 GDF5OSQ5U4N7 250 aa12.14□□□□□ -0.47
HMGN1-214ENST00000482733 TNFSF18Q9UNG2 199 aa12.14□□□□□ -0.47
HMGN1-214ENST00000482733 TIMM9Q9Y5J7 89 aa12.14□□□□□ -0.47
HMGN1-214ENST00000482733 ZNF253O75346 499 aa12.13□□□□□ -0.47
HMGN1-214ENST00000482733 DUSP14O95147 198 aaKnown RBP12.13□□□□□ -0.47
HMGN1-214ENST00000482733 GIG44P09565 113 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-214ENST00000482733 PSG3Q16557 428 aa12.13□□□□□ -0.47
HMGN1-214ENST00000482733 IGFL4Q6B9Z1 124 aa12.13□□□□□ -0.47
HMGN1-214ENST00000482733 ZNF738Q8NE65 137 aa12.13□□□□□ -0.47
HMGN1-214ENST00000482733 OR4B1Q8NGF8 309 aa12.13□□□□□ -0.47
HMGN1-214ENST00000482733 ZNF331Q9NQX6 463 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-214ENST00000482733 FUT9Q9Y231 359 aa12.13□□□□□ -0.47
HMGN1-214ENST00000482733 DNAH7Q8WXX0 4024 aa12.13□□□□□ -0.47
HMGN1-214ENST00000482733 RNF222A6NCQ9 220 aa12.12□□□□□ -0.47
HMGN1-214ENST00000482733 F6UB75 175 aa12.12□□□□□ -0.47
HMGN1-214ENST00000482733 C3orf84H3BNL1 204 aa12.12□□□□□ -0.47
HMGN1-214ENST00000482733 H3BQ15 152 aa12.12□□□□□ -0.47
HMGN1-214ENST00000482733 HIST1H1EP10412 219 aaKnown RBP12.12□□□□□ -0.47
HMGN1-214ENST00000482733 C4BPBP20851 252 aa12.12□□□□□ -0.47
HMGN1-214ENST00000482733 DEFB1P60022 68 aa12.12□□□□□ -0.47
HMGN1-214ENST00000482733 RNF182Q8N6D2 247 aa12.12□□□□□ -0.47
HMGN1-214ENST00000482733 IL17DQ8TAD2 202 aa12.12□□□□□ -0.47
HMGN1-214ENST00000482733 MUC7Q8TAX7 377 aa12.12□□□□□ -0.47
HMGN1-214ENST00000482733 RARRES2Q99969 163 aa12.12□□□□□ -0.47
HMGN1-214ENST00000482733 G3V3Q6 166 aa12.11□□□□□ -0.47
HMGN1-214ENST00000482733 RHOBP62745 196 aa12.11□□□□□ -0.47
HMGN1-214ENST00000482733 PSG9Q00887 426 aa12.11□□□□□ -0.47
HMGN1-214ENST00000482733 PDE6HQ13956 83 aa12.11□□□□□ -0.47
HMGN1-214ENST00000482733 ACOT6Q3I5F7 207 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-214ENST00000482733 MIR17HGQ75NE6 70 aa12.11□□□□□ -0.47
HMGN1-214ENST00000482733 OR11H2Q8NH07 326 aa12.11□□□□□ -0.47
HMGN1-214ENST00000482733 SAT2Q96F10 170 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-214ENST00000482733 SLC25A2Q9BXI2 301 aa12.11□□□□□ -0.47
HMGN1-214ENST00000482733 TRBV19A0A075B6N1 114 aa12.1□□□□□ -0.47
HMGN1-214ENST00000482733 BORCS7-ASMTA0A0B4J1R7 106 aa12.1□□□□□ -0.47
HMGN1-214ENST00000482733 A8MTW9 85 aa12.1□□□□□ -0.47
HMGN1-214ENST00000482733 IGKV3-20P01619 116 aa12.1□□□□□ -0.47
HMGN1-214ENST00000482733 SNRPCP09234 159 aaKnown RBP12.1□□□□□ -0.47
HMGN1-214ENST00000482733 TAS2R45P59539 299 aa12.1□□□□□ -0.47
HMGN1-214ENST00000482733 RPUSD4Q96CM3 377 aaKnown RBP12.1□□□□□ -0.47
HMGN1-214ENST00000482733 FAM167A-AS1Q96KT0 104 aa12.1□□□□□ -0.47
HMGN1-214ENST00000482733 PSMG3Q9BT73 122 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-214ENST00000482733 ZNF586Q9NXT0 402 aa12.1□□□□□ -0.47
HMGN1-214ENST00000482733 H3BTX0 84 aa12.09□□□□□ -0.47
HMGN1-214ENST00000482733 SLC17A3O00476 420 aa12.09□□□□□ -0.47
HMGN1-214ENST00000482733 TAAR5O14804 337 aa12.09□□□□□ -0.47
HMGN1-214ENST00000482733 ARPC5O15511 151 aa12.09□□□□□ -0.47
HMGN1-214ENST00000482733 M6PRP20645 277 aa12.09□□□□□ -0.47
HMGN1-214ENST00000482733 HLA-DMBP28068 263 aa12.09□□□□□ -0.47
HMGN1-214ENST00000482733 CNN1P51911 297 aaKnown RBP12.09□□□□□ -0.47
HMGN1-214ENST00000482733 HSD17B11Q8NBQ5 300 aa12.09□□□□□ -0.47
HMGN1-214ENST00000482733 CSNK1G2-AS1Q8NCQ2 148 aa12.09□□□□□ -0.47
HMGN1-214ENST00000482733 OR8A1Q8NGG7 326 aa12.09□□□□□ -0.47
HMGN1-214ENST00000482733 OR2G3Q8NGZ4 309 aa12.09□□□□□ -0.47
HMGN1-214ENST00000482733 OR51M1Q9H341 326 aa12.09□□□□□ -0.47
HMGN1-214ENST00000482733 XCL2Q9UBD3 114 aa12.09□□□□□ -0.47
HMGN1-214ENST00000482733 A0A0J9YWU9 116 aa12.08□□□□□ -0.48
HMGN1-214ENST00000482733 MBP02144 154 aa12.08□□□□□ -0.48
HMGN1-214ENST00000482733 AMBPP02760 352 aa12.08□□□□□ -0.48
HMGN1-214ENST00000482733 PYYP10082 97 aa12.08□□□□□ -0.48
HMGN1-214ENST00000482733 SERF2P84101 59 aa12.08□□□□□ -0.48
HMGN1-214ENST00000482733 KHDC3LQ587J8 217 aa12.08□□□□□ -0.48
HMGN1-214ENST00000482733 GNPNAT1Q96EK6 184 aaPredicted RBP12.08□□□□□ -0.48
HMGN1-214ENST00000482733 MRPL53Q96EL3 112 aaKnown RBP12.08□□□□□ -0.48
HMGN1-214ENST00000482733 PAXXQ9BUH6 204 aa12.08□□□□□ -0.48
HMGN1-214ENST00000482733 MFFQ9GZY8 342 aa12.08□□□□□ -0.48
HMGN1-214ENST00000482733 PRELID1Q9Y255 219 aa12.08□□□□□ -0.48
HMGN1-214ENST00000482733 A0A1W2PPV4 95 aa12.07□□□□□ -0.48
HMGN1-214ENST00000482733 ZNF705EA8MWA4 302 aaPredicted RBP12.07□□□□□ -0.48
HMGN1-214ENST00000482733 SMLR1H3BR10 107 aa12.07□□□□□ -0.48
HMGN1-214ENST00000482733 NBEAP1P0C6P0 100 aa12.07□□□□□ -0.48
HMGN1-214ENST00000482733 ATP6V0CP27449 155 aa12.07□□□□□ -0.48
HMGN1-214ENST00000482733 HIST1H1AQ02539 215 aaPredicted RBP12.07□□□□□ -0.48
HMGN1-214ENST00000482733 Q6ZNX1 250 aa12.07□□□□□ -0.48
HMGN1-214ENST00000482733 BLNKQ8WV28 456 aa12.07□□□□□ -0.48
HMGN1-214ENST00000482733 RNF141Q8WVD5 230 aa12.07□□□□□ -0.48
HMGN1-214ENST00000482733 SLC35B3Q9H1N7 401 aa12.07□□□□□ -0.48
HMGN1-214ENST00000482733 C11orf68Q9H3H3 251 aaKnown RBP12.07□□□□□ -0.48
HMGN1-214ENST00000482733 HMSDA8MTL9 139 aa12.06□□□□□ -0.48
HMGN1-214ENST00000482733 OR7C2O60412 319 aa12.06□□□□□ -0.48
HMGN1-214ENST00000482733 JTBO76095 146 aa12.06□□□□□ -0.48
HMGN1-214ENST00000482733 MIFP14174 115 aa12.06□□□□□ -0.48
HMGN1-214ENST00000482733 ZNF345Q14585 488 aa12.06□□□□□ -0.48
HMGN1-214ENST00000482733 RPL7L1Q6DKI1 246 aaKnown RBP12.06□□□□□ -0.48
HMGN1-214ENST00000482733 AMTNQ6UX39 209 aa12.06□□□□□ -0.48
HMGN1-214ENST00000482733 OR10G4Q8NGN3 311 aa12.06□□□□□ -0.48
HMGN1-214ENST00000482733 OR10G9Q8NGN4 311 aa12.06□□□□□ -0.48
HMGN1-214ENST00000482733 OR10G7Q8NGN6 311 aa12.06□□□□□ -0.48
HMGN1-214ENST00000482733 OR10J6PQ8NGY7 276 aa12.06□□□□□ -0.48
HMGN1-214ENST00000482733 FXYD5Q96DB9 178 aa12.06□□□□□ -0.48
HMGN1-214ENST00000482733 AAMDCQ9H7C9 122 aa12.06□□□□□ -0.48
HMGN1-214ENST00000482733 PPP1R14DQ9NXH3 145 aa12.06□□□□□ -0.48
HMGN1-214ENST00000482733 RFNGQ9Y644 331 aa12.06□□□□□ -0.48
HMGN1-214ENST00000482733 ZNF705FA8MVS1 300 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-214ENST00000482733 NDUFB4O95168 129 aa12.05□□□□□ -0.48
HMGN1-214ENST00000482733 ZNF705DP0CH99 300 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-214ENST00000482733 ZNF705BP0CI00 300 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-214ENST00000482733 FXYD7P58549 80 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms