RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 TMEM14CQ9P0S9 112 aa15.32■□□□□ 0.04
SEC13-217ENST00000482647 G3V3Q6 166 aa15.31■□□□□ 0.04
SEC13-217ENST00000482647 SNRPCP09234 159 aaKnown RBP15.31■□□□□ 0.04
SEC13-217ENST00000482647 CLUHP3Q96NS8 147 aa15.31■□□□□ 0.04
SEC13-217ENST00000482647 MRPL32Q9BYC8 188 aaKnown RBP15.31■□□□□ 0.04
SEC13-217ENST00000482647 EDA2RQ9HAV5 297 aa15.31■□□□□ 0.04
SEC13-217ENST00000482647 TIMM9Q9Y5J7 89 aa15.31■□□□□ 0.04
SEC13-217ENST00000482647 A0A0J9YX75 114 aa15.3■□□□□ 0.04
SEC13-217ENST00000482647 RNF222A6NCQ9 220 aa15.3■□□□□ 0.04
SEC13-217ENST00000482647 F6UB75 175 aa15.3■□□□□ 0.04
SEC13-217ENST00000482647 H3BQ15 152 aa15.3■□□□□ 0.04
SEC13-217ENST00000482647 GIG44P09565 113 aaPredicted RBP15.3■□□□□ 0.04
SEC13-217ENST00000482647 MIR17HGQ75NE6 70 aa15.3■□□□□ 0.04
SEC13-217ENST00000482647 ZNF738Q8NE65 137 aa15.3■□□□□ 0.04
SEC13-217ENST00000482647 OR4B1Q8NGF8 309 aa15.3■□□□□ 0.04
SEC13-217ENST00000482647 ZNF331Q9NQX6 463 aaPredicted RBP15.3■□□□□ 0.04
SEC13-217ENST00000482647 FUT9Q9Y231 359 aa15.3■□□□□ 0.04
SEC13-217ENST00000482647 H3BTX0 84 aa15.29■□□□□ 0.04
SEC13-217ENST00000482647 IGKV3-20P01619 116 aa15.29■□□□□ 0.04
SEC13-217ENST00000482647 PSG3Q16557 428 aa15.29■□□□□ 0.04
SEC13-217ENST00000482647 C1QTNF4Q9BXJ3 329 aa15.29■□□□□ 0.04
SEC13-217ENST00000482647 CLEC5AQ9NY25 188 aa15.29■□□□□ 0.04
SEC13-217ENST00000482647 BORCS7-ASMTA0A0B4J1R7 106 aa15.28■□□□□ 0.04
SEC13-217ENST00000482647 SMLR1H3BR10 107 aa15.28■□□□□ 0.04
SEC13-217ENST00000482647 ARPC5O15511 151 aa15.28■□□□□ 0.04
SEC13-217ENST00000482647 DUSP14O95147 198 aaKnown RBP15.28■□□□□ 0.04
SEC13-217ENST00000482647 HIST1H1EP10412 219 aaKnown RBP15.28■□□□□ 0.04
SEC13-217ENST00000482647 C4BPBP20851 252 aa15.28■□□□□ 0.04
SEC13-217ENST00000482647 RHOBP62745 196 aa15.28■□□□□ 0.04
SEC13-217ENST00000482647 HSD17B11Q8NBQ5 300 aa15.28■□□□□ 0.04
SEC13-217ENST00000482647 SAT2Q96F10 170 aaPredicted RBP15.28■□□□□ 0.04
SEC13-217ENST00000482647 RARRES2Q99969 163 aa15.28■□□□□ 0.04
SEC13-217ENST00000482647 SLC25A2Q9BXI2 301 aa15.28■□□□□ 0.04
SEC13-217ENST00000482647 ZNF586Q9NXT0 402 aa15.28■□□□□ 0.04
SEC13-217ENST00000482647 ZNF253O75346 499 aa15.27■□□□□ 0.04
SEC13-217ENST00000482647 HLA-DMBP28068 263 aa15.27■□□□□ 0.04
SEC13-217ENST00000482647 PSG9Q00887 426 aa15.27■□□□□ 0.04
SEC13-217ENST00000482647 ACOT6Q3I5F7 207 aaPredicted RBP15.27■□□□□ 0.04
SEC13-217ENST00000482647 Q6ZNX1 250 aa15.27■□□□□ 0.04
SEC13-217ENST00000482647 OR11H2Q8NH07 326 aa15.27■□□□□ 0.04
SEC13-217ENST00000482647 FAM167A-AS1Q96KT0 104 aa15.27■□□□□ 0.04
SEC13-217ENST00000482647 RFNGQ9Y644 331 aa15.27■□□□□ 0.04
SEC13-217ENST00000482647 AGRNO00468 2067 aa15.26■□□□□ 0.03
SEC13-217ENST00000482647 TRBV19A0A075B6N1 114 aa15.26■□□□□ 0.03
SEC13-217ENST00000482647 SLC17A3O00476 420 aa15.26■□□□□ 0.03
SEC13-217ENST00000482647 PYYP10082 97 aa15.26■□□□□ 0.03
SEC13-217ENST00000482647 M6PRP20645 277 aa15.26■□□□□ 0.03
SEC13-217ENST00000482647 RPUSD4Q96CM3 377 aaKnown RBP15.26■□□□□ 0.03
SEC13-217ENST00000482647 PSMG3Q9BT73 122 aaPredicted RBP15.26■□□□□ 0.03
SEC13-217ENST00000482647 MFFQ9GZY8 342 aa15.26■□□□□ 0.03
SEC13-217ENST00000482647 OR51M1Q9H341 326 aa15.26■□□□□ 0.03
SEC13-217ENST00000482647 TAAR5O14804 337 aa15.25■□□□□ 0.03
SEC13-217ENST00000482647 CNN1P51911 297 aaKnown RBP15.25■□□□□ 0.03
SEC13-217ENST00000482647 TAS2R45P59539 299 aa15.25■□□□□ 0.03
SEC13-217ENST00000482647 PDE6HQ13956 83 aa15.25■□□□□ 0.03
SEC13-217ENST00000482647 OR2G3Q8NGZ4 309 aa15.25■□□□□ 0.03
SEC13-217ENST00000482647 PAXXQ9BUH6 204 aa15.25■□□□□ 0.03
SEC13-217ENST00000482647 XCL2Q9UBD3 114 aa15.25■□□□□ 0.03
SEC13-217ENST00000482647 A0A1W2PPV4 95 aa15.24■□□□□ 0.03
SEC13-217ENST00000482647 ATP6V0CP27449 155 aa15.24■□□□□ 0.03
SEC13-217ENST00000482647 SERF2P84101 59 aa15.24■□□□□ 0.03
SEC13-217ENST00000482647 RPL7L1Q6DKI1 246 aaKnown RBP15.24■□□□□ 0.03
SEC13-217ENST00000482647 CSNK1G2-AS1Q8NCQ2 148 aa15.24■□□□□ 0.03
SEC13-217ENST00000482647 OR8A1Q8NGG7 326 aa15.24■□□□□ 0.03
SEC13-217ENST00000482647 MUC7Q8TAX7 377 aa15.24■□□□□ 0.03
SEC13-217ENST00000482647 BLNKQ8WV28 456 aa15.24■□□□□ 0.03
SEC13-217ENST00000482647 GNPNAT1Q96EK6 184 aaPredicted RBP15.24■□□□□ 0.03
SEC13-217ENST00000482647 DNAH7Q8WXX0 4024 aa15.24■□□□□ 0.03
SEC13-217ENST00000482647 A8MTW9 85 aa15.23■□□□□ 0.03
SEC13-217ENST00000482647 OR7C2O60412 319 aa15.23■□□□□ 0.03
SEC13-217ENST00000482647 JTBO76095 146 aa15.23■□□□□ 0.03
SEC13-217ENST00000482647 MBP02144 154 aa15.23■□□□□ 0.03
SEC13-217ENST00000482647 NBEAP1P0C6P0 100 aa15.23■□□□□ 0.03
SEC13-217ENST00000482647 ZNF705DP0CH99 300 aaPredicted RBP15.23■□□□□ 0.03
SEC13-217ENST00000482647 ZNF705BP0CI00 300 aaPredicted RBP15.23■□□□□ 0.03
SEC13-217ENST00000482647 HIST1H1AQ02539 215 aaPredicted RBP15.23■□□□□ 0.03
SEC13-217ENST00000482647 KHDC3LQ587J8 217 aa15.23■□□□□ 0.03
SEC13-217ENST00000482647 OR10G4Q8NGN3 311 aa15.23■□□□□ 0.03
SEC13-217ENST00000482647 OR10G9Q8NGN4 311 aa15.23■□□□□ 0.03
SEC13-217ENST00000482647 OR10G7Q8NGN6 311 aa15.23■□□□□ 0.03
SEC13-217ENST00000482647 RNF141Q8WVD5 230 aa15.23■□□□□ 0.03
SEC13-217ENST00000482647 A0A0J9YWU9 116 aa15.22■□□□□ 0.03
SEC13-217ENST00000482647 HMSDA8MTL9 139 aa15.22■□□□□ 0.03
SEC13-217ENST00000482647 ZNF705FA8MVS1 300 aaPredicted RBP15.22■□□□□ 0.03
SEC13-217ENST00000482647 C3orf84H3BNL1 204 aa15.22■□□□□ 0.03
SEC13-217ENST00000482647 NDUFB4O95168 129 aa15.22■□□□□ 0.03
SEC13-217ENST00000482647 FXYD7P58549 80 aa15.22■□□□□ 0.03
SEC13-217ENST00000482647 RAB2AP61019 212 aa15.22■□□□□ 0.03
SEC13-217ENST00000482647 IL17DQ8TAD2 202 aa15.22■□□□□ 0.03
SEC13-217ENST00000482647 FXYD5Q96DB9 178 aa15.22■□□□□ 0.03
SEC13-217ENST00000482647 SLC35B3Q9H1N7 401 aa15.22■□□□□ 0.03
SEC13-217ENST00000482647 OR10J4P0C629 311 aa15.21■□□□□ 0.03
SEC13-217ENST00000482647 ZNF345Q14585 488 aa15.21■□□□□ 0.03
SEC13-217ENST00000482647 AMTNQ6UX39 209 aa15.21■□□□□ 0.03
SEC13-217ENST00000482647 MRPL53Q96EL3 112 aaKnown RBP15.21■□□□□ 0.03
SEC13-217ENST00000482647 SH3BGRL3Q9H299 93 aa15.21■□□□□ 0.03
SEC13-217ENST00000482647 AAMDCQ9H7C9 122 aa15.21■□□□□ 0.03
SEC13-217ENST00000482647 PPP1R14DQ9NXH3 145 aa15.21■□□□□ 0.03
SEC13-217ENST00000482647 PRELID1Q9Y255 219 aa15.21■□□□□ 0.03
SEC13-217ENST00000482647 ZNF705EA8MWA4 302 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms