RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 LYRM2Q9NU23 88 aaPredicted RBP8.23□□□□□ -1.09
CCM2-213ENST00000480658 UQCC1Q9NVA1 299 aa8.23□□□□□ -1.09
CCM2-213ENST00000480658 DKK2Q9UBU2 259 aa8.23□□□□□ -1.09
CCM2-213ENST00000480658 PRAF2O60831 178 aa8.22□□□□□ -1.09
CCM2-213ENST00000480658 CYCSP99999 105 aaKnown RBP8.22□□□□□ -1.09
CCM2-213ENST00000480658 ASAH1Q13510 395 aa8.22□□□□□ -1.09
CCM2-213ENST00000480658 LSM5Q9Y4Y9 91 aaKnown RBP8.22□□□□□ -1.09
CCM2-213ENST00000480658 F6UB75 175 aa8.21□□□□□ -1.1
CCM2-213ENST00000480658 ZNF253O75346 499 aa8.21□□□□□ -1.1
CCM2-213ENST00000480658 RLN2P04090 185 aa8.21□□□□□ -1.1
CCM2-213ENST00000480658 PET100P0DJ07 73 aa8.21□□□□□ -1.1
CCM2-213ENST00000480658 CXCL3P19876 107 aa8.21□□□□□ -1.1
CCM2-213ENST00000480658 CDKN1BP46527 198 aa8.21□□□□□ -1.1
CCM2-213ENST00000480658 EMP1P54849 157 aa8.21□□□□□ -1.1
CCM2-213ENST00000480658 S100A10P60903 97 aa8.21□□□□□ -1.1
CCM2-213ENST00000480658 RHOBP62745 196 aa8.21□□□□□ -1.1
CCM2-213ENST00000480658 PSG3Q16557 428 aa8.21□□□□□ -1.1
CCM2-213ENST00000480658 VWC2Q2TAL6 325 aa8.21□□□□□ -1.1
CCM2-213ENST00000480658 FAM222AQ5U5X8 452 aa8.21□□□□□ -1.1
CCM2-213ENST00000480658 AMTNQ6UX39 209 aa8.21□□□□□ -1.1
CCM2-213ENST00000480658 TMEM182Q6ZP80 229 aaPredicted RBP8.21□□□□□ -1.1
CCM2-213ENST00000480658 C15orf53Q8NAA6 179 aa8.21□□□□□ -1.1
CCM2-213ENST00000480658 OR11H7Q8NGC8 314 aa8.21□□□□□ -1.1
CCM2-213ENST00000480658 OR8A1Q8NGG7 326 aa8.21□□□□□ -1.1
CCM2-213ENST00000480658 OR10J6PQ8NGY7 276 aa8.21□□□□□ -1.1
CCM2-213ENST00000480658 CHAC2Q8WUX2 184 aa8.21□□□□□ -1.1
CCM2-213ENST00000480658 UHRF2Q96PU4 802 aa8.21□□□□□ -1.1
CCM2-213ENST00000480658 DNAJC4Q9NNZ3 241 aa8.21□□□□□ -1.1
CCM2-213ENST00000480658 BATF3Q9NR55 127 aa8.21□□□□□ -1.1
CCM2-213ENST00000480658 CELA1Q9UNI1 258 aa8.21□□□□□ -1.1
CCM2-213ENST00000480658 YTHDF2Q9Y5A9 579 aaKnown RBP8.21□□□□□ -1.1
CCM2-213ENST00000480658 RPL29P47914 159 aaKnown RBP8.2□□□□□ -1.1
CCM2-213ENST00000480658 FAM3BP58499 235 aaPredicted RBP8.2□□□□□ -1.1
CCM2-213ENST00000480658 DAD1P61803 113 aa8.2□□□□□ -1.1
CCM2-213ENST00000480658 HIST1H1AQ02539 215 aaPredicted RBP8.2□□□□□ -1.1
CCM2-213ENST00000480658 BAXQ07812 192 aa8.2□□□□□ -1.1
CCM2-213ENST00000480658 ZNF493Q6ZR52 646 aa8.2□□□□□ -1.1
CCM2-213ENST00000480658 LINC00336Q6ZUF6 198 aa8.2□□□□□ -1.1
CCM2-213ENST00000480658 NRARPQ7Z6K4 114 aa8.2□□□□□ -1.1
CCM2-213ENST00000480658 RPP25LQ8N5L8 163 aaKnown RBP8.2□□□□□ -1.1
CCM2-213ENST00000480658 POM121L12Q8N7R1 296 aa8.2□□□□□ -1.1
CCM2-213ENST00000480658 RPUSD4Q96CM3 377 aaKnown RBP8.2□□□□□ -1.1
CCM2-213ENST00000480658 C16orf74Q96GX8 76 aa8.2□□□□□ -1.1
CCM2-213ENST00000480658 C20orf173Q96LM9 149 aa8.2□□□□□ -1.1
CCM2-213ENST00000480658 MGST2Q99735 147 aa8.2□□□□□ -1.1
CCM2-213ENST00000480658 SLC25A31Q9H0C2 315 aa8.2□□□□□ -1.1
CCM2-213ENST00000480658 ZNF331Q9NQX6 463 aaPredicted RBP8.2□□□□□ -1.1
CCM2-213ENST00000480658 TRAV8-2A0A0B4J237 113 aa8.19□□□□□ -1.1
CCM2-213ENST00000480658 H7BYZ3 331 aa8.19□□□□□ -1.1
CCM2-213ENST00000480658 CCSO14618 274 aa8.19□□□□□ -1.1
CCM2-213ENST00000480658 FXYD7P58549 80 aa8.19□□□□□ -1.1
CCM2-213ENST00000480658 TAS2R60P59551 318 aa8.19□□□□□ -1.1
CCM2-213ENST00000480658 DEFA1P59665 94 aa8.19□□□□□ -1.1
CCM2-213ENST00000480658 DEFA3P59666 94 aa8.19□□□□□ -1.1
CCM2-213ENST00000480658 PDE6HQ13956 83 aa8.19□□□□□ -1.1
CCM2-213ENST00000480658 SPINK13Q1W4C9 94 aa8.19□□□□□ -1.1
CCM2-213ENST00000480658 RNF212Q495C1 297 aa8.19□□□□□ -1.1
CCM2-213ENST00000480658 C1orf158Q8N1D5 194 aa8.19□□□□□ -1.1
CCM2-213ENST00000480658 RNF182Q8N6D2 247 aa8.19□□□□□ -1.1
CCM2-213ENST00000480658 MRPL53Q96EL3 112 aaKnown RBP8.19□□□□□ -1.1
CCM2-213ENST00000480658 ODF3Q96PU9 254 aa8.19□□□□□ -1.1
CCM2-213ENST00000480658 WDR83OSQ9Y284 106 aa8.19□□□□□ -1.1
CCM2-213ENST00000480658 UBE2L5PA0A1B0GUS4 154 aa8.18□□□□□ -1.1
CCM2-213ENST00000480658 E5RGE8 158 aa8.18□□□□□ -1.1
CCM2-213ENST00000480658 CCNKO75909 580 aa8.18□□□□□ -1.1
CCM2-213ENST00000480658 PRR20EP86478 221 aa8.18□□□□□ -1.1
CCM2-213ENST00000480658 PRR20CP86479 221 aa8.18□□□□□ -1.1
CCM2-213ENST00000480658 PRR20DP86480 221 aa8.18□□□□□ -1.1
CCM2-213ENST00000480658 PRR20BP86481 221 aa8.18□□□□□ -1.1
CCM2-213ENST00000480658 PRR20AP86496 221 aa8.18□□□□□ -1.1
CCM2-213ENST00000480658 UBE2DNLQ8IWF7 75 aa8.18□□□□□ -1.1
CCM2-213ENST00000480658 SEC22CQ9BRL7 303 aa8.18□□□□□ -1.1
CCM2-213ENST00000480658 NMES1Q9C002 83 aa8.18□□□□□ -1.1
CCM2-213ENST00000480658 PTTG2Q9NZH5 202 aa8.18□□□□□ -1.1
CCM2-213ENST00000480658 PRELID1Q9Y255 219 aa8.18□□□□□ -1.1
CCM2-213ENST00000480658 M0R2Z0 102 aa8.17□□□□□ -1.1
CCM2-213ENST00000480658 MRPS12O15235 138 aaKnown RBP8.17□□□□□ -1.1
CCM2-213ENST00000480658 UPK1BO75841 260 aa8.17□□□□□ -1.1
CCM2-213ENST00000480658 CST7O76096 145 aa8.17□□□□□ -1.1
CCM2-213ENST00000480658 IGLC2P0DOY2 106 aa8.17□□□□□ -1.1
CCM2-213ENST00000480658 LEPP41159 167 aa8.17□□□□□ -1.1
CCM2-213ENST00000480658 DEFB1P60022 68 aa8.17□□□□□ -1.1
CCM2-213ENST00000480658 RAB32Q13637 225 aa8.17□□□□□ -1.1
CCM2-213ENST00000480658 SOHLH1Q5JUK2 328 aa8.17□□□□□ -1.1
CCM2-213ENST00000480658 PATE2Q6UY27 113 aa8.17□□□□□ -1.1
CCM2-213ENST00000480658 CCDC28AQ8IWP9 274 aa8.17□□□□□ -1.1
CCM2-213ENST00000480658 TMEM252Q8N6L7 170 aa8.17□□□□□ -1.1
CCM2-213ENST00000480658 TMEM263Q8WUH6 116 aaKnown RBP8.17□□□□□ -1.1
CCM2-213ENST00000480658 TMEM37Q8WXS4 190 aa8.17□□□□□ -1.1
CCM2-213ENST00000480658 C17orf77Q96MU5 243 aa8.17□□□□□ -1.1
CCM2-213ENST00000480658 LINC01587Q99440 93 aa8.17□□□□□ -1.1
CCM2-213ENST00000480658 AAMDCQ9H7C9 122 aa8.17□□□□□ -1.1
CCM2-213ENST00000480658 SLC39A9Q9NUM3 307 aa8.17□□□□□ -1.1
CCM2-213ENST00000480658 TMEM14CQ9P0S9 112 aa8.17□□□□□ -1.1
CCM2-213ENST00000480658 TIMM8BQ9Y5J9 83 aaPredicted RBP8.17□□□□□ -1.1
CCM2-213ENST00000480658 PLECQ15149 4684 aaKnown RBP8.17□□□□□ -1.1
CCM2-213ENST00000480658 C17orf112F2Z3M2 114 aa8.16□□□□□ -1.1
CCM2-213ENST00000480658 AGRNO00468 2067 aa8.16□□□□□ -1.1
CCM2-213ENST00000480658 CRXO43186 299 aaPredicted RBP8.16□□□□□ -1.1
CCM2-213ENST00000480658 FGF7P21781 194 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms