RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 BMI1P35226 326 aa6.33□□□□□ -1.4
USP54-212ENST00000480210 SELENOTP62341 195 aa6.33□□□□□ -1.4
USP54-212ENST00000480210 DEFB136Q30KP8 78 aa6.33□□□□□ -1.4
USP54-212ENST00000480210 S100A7AQ86SG5 101 aa6.33□□□□□ -1.4
USP54-212ENST00000480210 TMEM252Q8N6L7 170 aa6.33□□□□□ -1.4
USP54-212ENST00000480210 OR4B1Q8NGF8 309 aa6.33□□□□□ -1.4
USP54-212ENST00000480210 OR9G4Q8NGQ1 327 aa6.33□□□□□ -1.4
USP54-212ENST00000480210 NPIPB3Q92617 1050 aa6.33□□□□□ -1.4
USP54-212ENST00000480210 DLX4Q92988 240 aaPredicted RBP6.33□□□□□ -1.4
USP54-212ENST00000480210 OR4C12Q96R67 309 aa6.33□□□□□ -1.4
USP54-212ENST00000480210 TRGV9Q99603 122 aa6.33□□□□□ -1.4
USP54-212ENST00000480210 MAP1LC3BQ9GZQ8 125 aa6.33□□□□□ -1.4
USP54-212ENST00000480210 MRPL27Q9P0M9 148 aaKnown RBP6.33□□□□□ -1.4
USP54-212ENST00000480210 NAGKQ9UJ70 344 aa6.33□□□□□ -1.4
USP54-212ENST00000480210 ANK2Q01484 3957 aa6.32□□□□□ -1.4
USP54-212ENST00000480210 IGHV3-21A0A0B4J1V1 117 aa6.32□□□□□ -1.4
USP54-212ENST00000480210 XKRY2A2RUG3 117 aa6.32□□□□□ -1.4
USP54-212ENST00000480210 FAM24AA6NFZ4 105 aa6.32□□□□□ -1.4
USP54-212ENST00000480210 C9JQL5 133 aa6.32□□□□□ -1.4
USP54-212ENST00000480210 H0YIZ8 118 aa6.32□□□□□ -1.4
USP54-212ENST00000480210 H3BP45 60 aa6.32□□□□□ -1.4
USP54-212ENST00000480210 WIPF1O43516 503 aa6.32□□□□□ -1.4
USP54-212ENST00000480210 TRBV12-3P01733 135 aa6.32□□□□□ -1.4
USP54-212ENST00000480210 IGLC1P0CG04 106 aa6.32□□□□□ -1.4
USP54-212ENST00000480210 SLURP1P55000 103 aa6.32□□□□□ -1.4
USP54-212ENST00000480210 RAB31Q13636 194 aa6.32□□□□□ -1.4
USP54-212ENST00000480210 MLANAQ16655 118 aa6.32□□□□□ -1.4
USP54-212ENST00000480210 THAP8Q8NA92 274 aa6.32□□□□□ -1.4
USP54-212ENST00000480210 OR2K2Q8NGT1 345 aa6.32□□□□□ -1.4
USP54-212ENST00000480210 FRZBQ92765 325 aa6.32□□□□□ -1.4
USP54-212ENST00000480210 DUX3Q96PT4 197 aa6.32□□□□□ -1.4
USP54-212ENST00000480210 TECRQ9NZ01 308 aaKnown RBP6.32□□□□□ -1.4
USP54-212ENST00000480210 NAT8Q9UHE5 227 aa6.32□□□□□ -1.4
USP54-212ENST00000480210 RNF24Q9Y225 148 aa6.32□□□□□ -1.4
USP54-212ENST00000480210 NOTCH3Q9UM47 2321 aa6.31□□□□□ -1.4
USP54-212ENST00000480210 A0A1W2PS18 150 aa6.31□□□□□ -1.4
USP54-212ENST00000480210 ZNF320A2RRD8 509 aa6.31□□□□□ -1.4
USP54-212ENST00000480210 ZFP92A6NM28 416 aa6.31□□□□□ -1.4
USP54-212ENST00000480210 K7ERU9 68 aa6.31□□□□□ -1.4
USP54-212ENST00000480210 MPDU1O75352 247 aa6.31□□□□□ -1.4
USP54-212ENST00000480210 TOMM40O96008 361 aa6.31□□□□□ -1.4
USP54-212ENST00000480210 C8orf88P0DMB2 117 aa6.31□□□□□ -1.4
USP54-212ENST00000480210 ADMP35318 185 aa6.31□□□□□ -1.4
USP54-212ENST00000480210 AKR1C3P42330 323 aa6.31□□□□□ -1.4
USP54-212ENST00000480210 PTTG1IPP53801 180 aa6.31□□□□□ -1.4
USP54-212ENST00000480210 SYNJ2BPP57105 145 aa6.31□□□□□ -1.4
USP54-212ENST00000480210 UBE2G2P60604 165 aa6.31□□□□□ -1.4
USP54-212ENST00000480210 HIST2H2BDQ6DRA6 164 aa6.31□□□□□ -1.4
USP54-212ENST00000480210 OR8G2PQ6IF36 304 aa6.31□□□□□ -1.4
USP54-212ENST00000480210 TEPPQ6URK8 271 aa6.31□□□□□ -1.4
USP54-212ENST00000480210 ZNF738Q8NE65 137 aa6.31□□□□□ -1.4
USP54-212ENST00000480210 TMEM190Q8WZ59 177 aa6.31□□□□□ -1.4
USP54-212ENST00000480210 CHRDL1Q9BU40 450 aa6.31□□□□□ -1.4
USP54-212ENST00000480210 C20orf24Q9BUV8 137 aa6.31□□□□□ -1.4
USP54-212ENST00000480210 SEPSECSQ9HD40 501 aaKnown RBP6.31□□□□□ -1.4
USP54-212ENST00000480210 DAZ1Q9NQZ3 744 aaKnown RBP6.31□□□□□ -1.4
USP54-212ENST00000480210 S4R3C0 116 aa6.31□□□□□ -1.4
USP54-212ENST00000480210 TRAV25A0A0B4J276 109 aa6.3□□□□□ -1.4
USP54-212ENST00000480210 CBY3A6NI87 242 aa6.3□□□□□ -1.4
USP54-212ENST00000480210 F6UZH7 168 aa6.3□□□□□ -1.4
USP54-212ENST00000480210 TMEM250H0YL14 139 aa6.3□□□□□ -1.4
USP54-212ENST00000480210 EREGO14944 169 aa6.3□□□□□ -1.4
USP54-212ENST00000480210 SCGB1D1O95968 90 aa6.3□□□□□ -1.4
USP54-212ENST00000480210 IGKV1-17P01599 117 aa6.3□□□□□ -1.4
USP54-212ENST00000480210 CXCL1P09341 107 aa6.3□□□□□ -1.4
USP54-212ENST00000480210 NPPCP23582 126 aa6.3□□□□□ -1.4
USP54-212ENST00000480210 SERF2P84101 59 aa6.3□□□□□ -1.4
USP54-212ENST00000480210 EWSR1Q01844 656 aaKnown RBP eCLIP6.3□□□□□ -1.4
USP54-212ENST00000480210 SLC38A11Q08AI6 406 aa6.3□□□□□ -1.4
USP54-212ENST00000480210 UBE2V1Q13404 147 aa6.3□□□□□ -1.4
USP54-212ENST00000480210 C21orf62-AS1Q17RA5 79 aa6.3□□□□□ -1.4
USP54-212ENST00000480210 VWC2Q2TAL6 325 aa6.3□□□□□ -1.4
USP54-212ENST00000480210 TMEM41BQ5BJD5 291 aa6.3□□□□□ -1.4
USP54-212ENST00000480210 DMRTA1Q5VZB9 504 aa6.3□□□□□ -1.4
USP54-212ENST00000480210 ZNF705AQ6ZN79 300 aaPredicted RBP6.3□□□□□ -1.4
USP54-212ENST00000480210 OR51G1Q8NGK1 321 aa6.3□□□□□ -1.4
USP54-212ENST00000480210 OR2G3Q8NGZ4 309 aa6.3□□□□□ -1.4
USP54-212ENST00000480210 FAM213BQ8TBF2 198 aa6.3□□□□□ -1.4
USP54-212ENST00000480210 TXNDC17Q9BRA2 123 aa6.3□□□□□ -1.4
USP54-212ENST00000480210 TMEM147Q9BVK8 224 aa6.3□□□□□ -1.4
USP54-212ENST00000480210 SLC45A2Q9UMX9 530 aa6.3□□□□□ -1.4
USP54-212ENST00000480210 TRRAPQ9Y4A5 3859 aa6.3□□□□□ -1.4
USP54-212ENST00000480210 IGSF23A1L1A6 192 aa6.29□□□□□ -1.4
USP54-212ENST00000480210 C2orf70A6NJV1 201 aa6.29□□□□□ -1.4
USP54-212ENST00000480210 SAP30O75446 220 aa6.29□□□□□ -1.4
USP54-212ENST00000480210 CST7O76096 145 aa6.29□□□□□ -1.4
USP54-212ENST00000480210 IGHV3-48P01763 117 aa6.29□□□□□ -1.4
USP54-212ENST00000480210 CSN3P07498 182 aa6.29□□□□□ -1.4
USP54-212ENST00000480210 ESDP10768 282 aa6.29□□□□□ -1.4
USP54-212ENST00000480210 CBLN1P23435 193 aa6.29□□□□□ -1.4
USP54-212ENST00000480210 CNN1P51911 297 aaKnown RBP6.29□□□□□ -1.4
USP54-212ENST00000480210 PLP1P60201 277 aa6.29□□□□□ -1.4
USP54-212ENST00000480210 OR5I1Q13606 314 aa6.29□□□□□ -1.4
USP54-212ENST00000480210 TIGITQ495A1 244 aa6.29□□□□□ -1.4
USP54-212ENST00000480210 SAMD5Q5TGI4 173 aa6.29□□□□□ -1.4
USP54-212ENST00000480210 GBGT1Q8N5D6 347 aa6.29□□□□□ -1.4
USP54-212ENST00000480210 NUDT10Q8NFP7 164 aa6.29□□□□□ -1.4
USP54-212ENST00000480210 GRAMD2BQ96HH9 432 aa6.29□□□□□ -1.4
USP54-212ENST00000480210 METTL26Q96S19 204 aa6.29□□□□□ -1.4
USP54-212ENST00000480210 PSMG3Q9BT73 122 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms