RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 RASL11AQ6T310 242 aa11.6□□□□□ -0.55
COL20A1-206ENST00000479501 KIR3DL3Q8N743 410 aa11.6□□□□□ -0.55
COL20A1-206ENST00000479501 MRPL27Q9P0M9 148 aaKnown RBP11.6□□□□□ -0.55
COL20A1-206ENST00000479501 MINOS1-NBL1R4GNA1 71 aa11.6□□□□□ -0.55
COL20A1-206ENST00000479501 GAGE13Q4V321 117 aa11.6□□□□□ -0.55
COL20A1-206ENST00000479501 TEX29Q8N6K0 151 aa11.6□□□□□ -0.55
COL20A1-206ENST00000479501 PRSS33Q8NF86 280 aa11.6□□□□□ -0.55
COL20A1-206ENST00000479501 CEACAM4O75871 244 aa11.59□□□□□ -0.55
COL20A1-206ENST00000479501 LYPD6BQ8NI32 183 aa11.59□□□□□ -0.55
COL20A1-206ENST00000479501 DNAL4O96015 105 aa11.59□□□□□ -0.55
COL20A1-206ENST00000479501 NDUFA4L2Q9NRX3 87 aa11.59□□□□□ -0.55
COL20A1-206ENST00000479501 SYS1-DBNDD2H3BUS1 97 aa11.59□□□□□ -0.55
COL20A1-206ENST00000479501 PRTN3P24158 256 aa11.59□□□□□ -0.55
COL20A1-206ENST00000479501 ZNF833PQ6ZTB9 187 aa11.59□□□□□ -0.55
COL20A1-206ENST00000479501 EXOC3-AS1Q8N2X6 119 aa11.59□□□□□ -0.55
COL20A1-206ENST00000479501 MRPS16Q9Y3D3 137 aaKnown RBP11.59□□□□□ -0.55
COL20A1-206ENST00000479501 BCL6BQ8N143 479 aaPredicted RBP11.59□□□□□ -0.55
COL20A1-206ENST00000479501 ANAPC13Q9BS18 74 aa11.59□□□□□ -0.55
COL20A1-206ENST00000479501 IGF2-ASQ6U949 168 aa11.58□□□□□ -0.56
COL20A1-206ENST00000479501 NUP35Q8NFH5 326 aa11.58□□□□□ -0.56
COL20A1-206ENST00000479501 MRAP2Q96G30 205 aa11.58□□□□□ -0.56
COL20A1-206ENST00000479501 KLF2Q9Y5W3 355 aaPredicted RBP11.58□□□□□ -0.56
COL20A1-206ENST00000479501 TCRAP04437 139 aa11.58□□□□□ -0.56
COL20A1-206ENST00000479501 CENPVQ7Z7K6 275 aaPredicted RBP11.58□□□□□ -0.56
COL20A1-206ENST00000479501 COPS9Q8WXC6 57 aa11.58□□□□□ -0.56
COL20A1-206ENST00000479501 DDB2Q92466 427 aa11.58□□□□□ -0.56
COL20A1-206ENST00000479501 GTSF1LQ9H1H1 148 aa11.58□□□□□ -0.56
COL20A1-206ENST00000479501 ARFGEF3Q5TH69 2177 aa11.58□□□□□ -0.56
COL20A1-206ENST00000479501 HOXA3O43365 443 aaPredicted RBP11.58□□□□□ -0.56
COL20A1-206ENST00000479501 ASIPP42127 132 aa11.58□□□□□ -0.56
COL20A1-206ENST00000479501 TRAV40A0A0B4J280 105 aa11.58□□□□□ -0.56
COL20A1-206ENST00000479501 Q0VG73 95 aa11.58□□□□□ -0.56
COL20A1-206ENST00000479501 SLC50A1Q9BRV3 221 aa11.58□□□□□ -0.56
COL20A1-206ENST00000479501 EML6Q6ZMW3 1958 aa11.57□□□□□ -0.56
COL20A1-206ENST00000479501 PCNTO95613 3336 aa11.57□□□□□ -0.56
COL20A1-206ENST00000479501 CD5LO43866 347 aa11.57□□□□□ -0.56
COL20A1-206ENST00000479501 IGKCP01834 107 aa11.57□□□□□ -0.56
COL20A1-206ENST00000479501 C15orf32Q32M92 178 aa11.57□□□□□ -0.56
COL20A1-206ENST00000479501 LINC00527Q9UJ94 153 aa11.57□□□□□ -0.56
COL20A1-206ENST00000479501 GNLYP22749 145 aa11.57□□□□□ -0.56
COL20A1-206ENST00000479501 JMJD8Q96S16 334 aa11.57□□□□□ -0.56
COL20A1-206ENST00000479501 WISP2O76076 250 aa11.56□□□□□ -0.56
COL20A1-206ENST00000479501 PRB4P10163 310 aaPredicted RBP11.56□□□□□ -0.56
COL20A1-206ENST00000479501 PPIFP30405 207 aaKnown RBP11.56□□□□□ -0.56
COL20A1-206ENST00000479501 SNRPD3P62318 126 aaKnown RBP11.56□□□□□ -0.56
COL20A1-206ENST00000479501 LINC00311Q8N616 119 aa11.56□□□□□ -0.56
COL20A1-206ENST00000479501 TMEM262E9PQX1 116 aa11.56□□□□□ -0.56
COL20A1-206ENST00000479501 ZNF138P52744 262 aa11.56□□□□□ -0.56
COL20A1-206ENST00000479501 MCRIP2Q9BUT9 160 aaKnown RBP11.56□□□□□ -0.56
COL20A1-206ENST00000479501 IGKV3-20P01619 116 aa11.56□□□□□ -0.56
COL20A1-206ENST00000479501 SUMO2P61956 95 aaKnown RBP11.56□□□□□ -0.56
COL20A1-206ENST00000479501 TCF15Q12870 199 aa11.56□□□□□ -0.56
COL20A1-206ENST00000479501 LINC00479Q96M42 142 aa11.56□□□□□ -0.56
COL20A1-206ENST00000479501 ASCL2Q99929 193 aa11.56□□□□□ -0.56
COL20A1-206ENST00000479501 MED12LQ86YW9 2145 aa11.56□□□□□ -0.56
COL20A1-206ENST00000479501 RNASE1P07998 156 aaKnown RBP11.56□□□□□ -0.56
COL20A1-206ENST00000479501 POU2AF1Q16633 256 aa11.56□□□□□ -0.56
COL20A1-206ENST00000479501 SRRM4A7MD48 611 aaKnown RBP11.55□□□□□ -0.56
COL20A1-206ENST00000479501 PIEZO2Q9H5I5 2752 aa11.55□□□□□ -0.56
COL20A1-206ENST00000479501 SRSF1Q07955 248 aaKnown RBP eCLIP11.55□□□□□ -0.56
COL20A1-206ENST00000479501 UNQ6494/PRO21346Q6UXR6 183 aa11.55□□□□□ -0.56
COL20A1-206ENST00000479501 A8MWV9 139 aa11.55□□□□□ -0.56
COL20A1-206ENST00000479501 IGLC2P0DOY2 106 aa11.55□□□□□ -0.56
COL20A1-206ENST00000479501 IGLC3P0DOY3 106 aa11.55□□□□□ -0.56
COL20A1-206ENST00000479501 EVI2AP22794 236 aa11.55□□□□□ -0.56
COL20A1-206ENST00000479501 OCIAD2Q56VL3 154 aa11.55□□□□□ -0.56
COL20A1-206ENST00000479501 SPRNQ5BIV9 151 aa11.55□□□□□ -0.56
COL20A1-206ENST00000479501 PLA2G2EQ9NZK7 142 aa11.55□□□□□ -0.56
COL20A1-206ENST00000479501 WT1-ASQ06250 92 aa11.54□□□□□ -0.56
COL20A1-206ENST00000479501 TMEM219Q86XT9 240 aa11.54□□□□□ -0.56
COL20A1-206ENST00000479501 CST9LQ9H4G1 147 aa11.54□□□□□ -0.56
COL20A1-206ENST00000479501 TRAV8-1A0A0A6YYK1 113 aa11.54□□□□□ -0.56
COL20A1-206ENST00000479501 NPIPB5A8MRT5 1133 aa11.54□□□□□ -0.56
COL20A1-206ENST00000479501 D6R8Y8 96 aa11.54□□□□□ -0.56
COL20A1-206ENST00000479501 ESDP10768 282 aa11.54□□□□□ -0.56
COL20A1-206ENST00000479501 CNTFRP26992 372 aa11.54□□□□□ -0.56
COL20A1-206ENST00000479501 KIR3DS1Q14943 382 aa11.54□□□□□ -0.56
COL20A1-206ENST00000479501 MAJINQ3KP22 176 aa11.54□□□□□ -0.56
COL20A1-206ENST00000479501 PSMB11A5LHX3 300 aa11.54□□□□□ -0.56
COL20A1-206ENST00000479501 ZNF815PA8K554 130 aa11.54□□□□□ -0.56
COL20A1-206ENST00000479501 CRIP3Q6Q6R5 217 aa11.54□□□□□ -0.56
COL20A1-206ENST00000479501 GTSCR1Q86UQ5 136 aa11.54□□□□□ -0.56
COL20A1-206ENST00000479501 BPESC1Q9GZL8 116 aa11.54□□□□□ -0.56
COL20A1-206ENST00000479501 LHBP01229 141 aa11.54□□□□□ -0.56
COL20A1-206ENST00000479501 RPL15P61313 204 aaKnown RBP11.54□□□□□ -0.56
COL20A1-206ENST00000479501 KAAG1Q9UBP8 84 aa11.54□□□□□ -0.56
COL20A1-206ENST00000479501 SRSF8Q9BRL6 282 aaKnown RBP11.53□□□□□ -0.56
COL20A1-206ENST00000479501 CYSLTR1Q9Y271 337 aa11.53□□□□□ -0.56
COL20A1-206ENST00000479501 PIEZO1Q92508 2521 aa11.53□□□□□ -0.56
COL20A1-206ENST00000479501 SEM1Q6ZVN7 128 aa11.53□□□□□ -0.56
COL20A1-206ENST00000479501 Q6ZWC4 215 aa11.53□□□□□ -0.56
COL20A1-206ENST00000479501 SMPXQ9UHP9 88 aa11.53□□□□□ -0.56
COL20A1-206ENST00000479501 MOB4Q9Y3A3 225 aa11.53□□□□□ -0.56
COL20A1-206ENST00000479501 TRAV41A0A0B4J266 112 aa11.53□□□□□ -0.56
COL20A1-206ENST00000479501 NCR2O95944 276 aa11.53□□□□□ -0.56
COL20A1-206ENST00000479501 DIAPH2-AS1Q14236 149 aa11.53□□□□□ -0.56
COL20A1-206ENST00000479501 CDPF1Q6NVV7 123 aa11.53□□□□□ -0.56
COL20A1-206ENST00000479501 UBE2L6O14933 153 aa11.52□□□□□ -0.56
COL20A1-206ENST00000479501 PAX8Q06710 450 aa11.52□□□□□ -0.56
COL20A1-206ENST00000479501 TMEM95Q3KNT9 176 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms