RNA–Protein interactions for RNA: ENST00000478215.1

COL1A2-207, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 3

Gene COL1A2, Length 863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-207ENST00000478215 RYR3Q15413 4870 aa9.46□□□□□ -0.9
COL1A2-207ENST00000478215 H3BTX0 84 aa9.45□□□□□ -0.9
COL1A2-207ENST00000478215 MPDU1O75352 247 aa9.45□□□□□ -0.9
COL1A2-207ENST00000478215 OXA1LQ15070 435 aa9.45□□□□□ -0.9
COL1A2-207ENST00000478215 FAM78BQ5VT40 261 aa9.45□□□□□ -0.9
COL1A2-207ENST00000478215 ZNF709Q8N972 641 aa9.45□□□□□ -0.9
COL1A2-207ENST00000478215 OR4B1Q8NGF8 309 aa9.45□□□□□ -0.9
COL1A2-207ENST00000478215 OR1L4Q8NGR5 311 aa9.45□□□□□ -0.9
COL1A2-207ENST00000478215 IL17DQ8TAD2 202 aa9.45□□□□□ -0.9
COL1A2-207ENST00000478215 PFDN5Q99471 154 aa9.45□□□□□ -0.9
COL1A2-207ENST00000478215 ATP5SQ99766 215 aa9.45□□□□□ -0.9
COL1A2-207ENST00000478215 WDR61Q9GZS3 305 aaKnown RBP9.45□□□□□ -0.9
COL1A2-207ENST00000478215 H3BQ15 152 aa9.44□□□□□ -0.9
COL1A2-207ENST00000478215 SLC17A3O00476 420 aa9.44□□□□□ -0.9
COL1A2-207ENST00000478215 DEFB4AO15263 64 aa9.44□□□□□ -0.9
COL1A2-207ENST00000478215 ZNF705DP0CH99 300 aaPredicted RBP9.44□□□□□ -0.9
COL1A2-207ENST00000478215 ZNF705BP0CI00 300 aaPredicted RBP9.44□□□□□ -0.9
COL1A2-207ENST00000478215 TMEM41BQ5BJD5 291 aa9.44□□□□□ -0.9
COL1A2-207ENST00000478215 Q5BKY6 102 aa9.44□□□□□ -0.9
COL1A2-207ENST00000478215 EBLN2Q6P2I7 272 aa9.44□□□□□ -0.9
COL1A2-207ENST00000478215 BPIFA4PQ86YQ2 179 aa9.44□□□□□ -0.9
COL1A2-207ENST00000478215 Q8NAQ8 132 aa9.44□□□□□ -0.9
COL1A2-207ENST00000478215 SLC35B3Q9H1N7 401 aa9.44□□□□□ -0.9
COL1A2-207ENST00000478215 WFDC1Q9HC57 220 aa9.44□□□□□ -0.9
COL1A2-207ENST00000478215 X6R8D5 127 aa9.44□□□□□ -0.9
COL1A2-207ENST00000478215 A8MTW9 85 aa9.43□□□□□ -0.9
COL1A2-207ENST00000478215 ZNF705EA8MWA4 302 aaPredicted RBP9.43□□□□□ -0.9
COL1A2-207ENST00000478215 IGLC2P0DOY2 106 aa9.43□□□□□ -0.9
COL1A2-207ENST00000478215 PSG3Q16557 428 aa9.43□□□□□ -0.9
COL1A2-207ENST00000478215 SPATA31B1PQ5VZV4 182 aa9.43□□□□□ -0.9
COL1A2-207ENST00000478215 LCN15Q6UWW0 184 aa9.43□□□□□ -0.9
COL1A2-207ENST00000478215 AMTNQ6UX39 209 aa9.43□□□□□ -0.9
COL1A2-207ENST00000478215 ZNF738Q8NE65 137 aa9.43□□□□□ -0.9
COL1A2-207ENST00000478215 CLUHP3Q96NS8 147 aa9.43□□□□□ -0.9
COL1A2-207ENST00000478215 C11orf68Q9H3H3 251 aaKnown RBP9.43□□□□□ -0.9
COL1A2-207ENST00000478215 RNF24Q9Y225 148 aa9.43□□□□□ -0.9
COL1A2-207ENST00000478215 RFNGQ9Y644 331 aa9.43□□□□□ -0.9
COL1A2-207ENST00000478215 HYDINQ4G0P3 5121 aa9.42□□□□□ -0.9
COL1A2-207ENST00000478215 GIPP09681 153 aaPredicted RBP9.42□□□□□ -0.9
COL1A2-207ENST00000478215 RBMY1A1P0DJD3 496 aaKnown RBP9.42□□□□□ -0.9
COL1A2-207ENST00000478215 RBMY1CP0DJD4 496 aa9.42□□□□□ -0.9
COL1A2-207ENST00000478215 NUTF2P61970 127 aaKnown RBP9.42□□□□□ -0.9
COL1A2-207ENST00000478215 PMS2P11Q13670 270 aa9.42□□□□□ -0.9
COL1A2-207ENST00000478215 RBMY1FQ15415 496 aaKnown RBP9.42□□□□□ -0.9
COL1A2-207ENST00000478215 LRRC20Q8TCA0 184 aa9.42□□□□□ -0.9
COL1A2-207ENST00000478215 C1QTNF4Q9BXJ3 329 aa9.42□□□□□ -0.9
COL1A2-207ENST00000478215 ZNF331Q9NQX6 463 aaPredicted RBP9.42□□□□□ -0.9
COL1A2-207ENST00000478215 RYR2Q92736 4967 aa9.41□□□□□ -0.9
COL1A2-207ENST00000478215 IGHV4-28A0A0C4DH34 117 aa9.41□□□□□ -0.9
COL1A2-207ENST00000478215 ZNF705FA8MVS1 300 aaPredicted RBP9.41□□□□□ -0.9
COL1A2-207ENST00000478215 PYYP10082 97 aa9.41□□□□□ -0.9
COL1A2-207ENST00000478215 CXCL2P19875 107 aa9.41□□□□□ -0.9
COL1A2-207ENST00000478215 CNN1P51911 297 aaKnown RBP9.41□□□□□ -0.9
COL1A2-207ENST00000478215 PSG9Q00887 426 aa9.41□□□□□ -0.9
COL1A2-207ENST00000478215 MIR17HGQ75NE6 70 aa9.41□□□□□ -0.9
COL1A2-207ENST00000478215 SAT2Q96F10 170 aaPredicted RBP9.41□□□□□ -0.9
COL1A2-207ENST00000478215 FAM167A-AS1Q96KT0 104 aa9.41□□□□□ -0.9
COL1A2-207ENST00000478215 SLC50A1Q9BRV3 221 aa9.41□□□□□ -0.9
COL1A2-207ENST00000478215 SLC25A2Q9BXI2 301 aa9.41□□□□□ -0.9
COL1A2-207ENST00000478215 MFFQ9GZY8 342 aa9.41□□□□□ -0.9
COL1A2-207ENST00000478215 HRH4Q9H3N8 390 aa9.41□□□□□ -0.9
COL1A2-207ENST00000478215 ZNF586Q9NXT0 402 aa9.41□□□□□ -0.9
COL1A2-207ENST00000478215 PRAC2D3DTV9 90 aa9.4□□□□□ -0.9
COL1A2-207ENST00000478215 ZNF705AQ6ZN79 300 aaPredicted RBP9.4□□□□□ -0.9
COL1A2-207ENST00000478215 OR8A1Q8NGG7 326 aa9.4□□□□□ -0.9
COL1A2-207ENST00000478215 RPUSD4Q96CM3 377 aaKnown RBP9.4□□□□□ -0.9
COL1A2-207ENST00000478215 KCNIP2Q9NS61 270 aa9.4□□□□□ -0.9
COL1A2-207ENST00000478215 CXorf65A6NEN9 183 aa9.39□□□□□ -0.91
COL1A2-207ENST00000478215 G3V3Q6 166 aa9.39□□□□□ -0.91
COL1A2-207ENST00000478215 M0R2Z0 102 aa9.39□□□□□ -0.91
COL1A2-207ENST00000478215 DUSP14O95147 198 aaKnown RBP9.39□□□□□ -0.91
COL1A2-207ENST00000478215 IFNA5P01569 189 aa9.39□□□□□ -0.91
COL1A2-207ENST00000478215 MIFP14174 115 aa9.39□□□□□ -0.91
COL1A2-207ENST00000478215 NANOS2P60321 138 aaKnown RBP9.39□□□□□ -0.91
COL1A2-207ENST00000478215 HIST1H1AQ02539 215 aaPredicted RBP9.39□□□□□ -0.91
COL1A2-207ENST00000478215 SPINK13Q1W4C9 94 aa9.39□□□□□ -0.91
COL1A2-207ENST00000478215 FFAR4Q5NUL3 377 aa9.39□□□□□ -0.91
COL1A2-207ENST00000478215 AQP10Q96PS8 301 aa9.39□□□□□ -0.91
COL1A2-207ENST00000478215 TMEM14CQ9P0S9 112 aa9.39□□□□□ -0.91
COL1A2-207ENST00000478215 VPS13DQ5THJ4 4388 aa9.39□□□□□ -0.91
COL1A2-207ENST00000478215 TRBV19A0A075B6N1 114 aa9.38□□□□□ -0.91
COL1A2-207ENST00000478215 IGHV3OR16-12A0A075B7B8 117 aa9.38□□□□□ -0.91
COL1A2-207ENST00000478215 C17orf112F2Z3M2 114 aa9.38□□□□□ -0.91
COL1A2-207ENST00000478215 NDUFB4O95168 129 aa9.38□□□□□ -0.91
COL1A2-207ENST00000478215 HIST1H1EP10412 219 aaKnown RBP9.38□□□□□ -0.91
COL1A2-207ENST00000478215 GUK1Q16774 197 aa9.38□□□□□ -0.91
COL1A2-207ENST00000478215 C1orf158Q8N1D5 194 aa9.38□□□□□ -0.91
COL1A2-207ENST00000478215 SCGB1C1Q8TD33 95 aa9.38□□□□□ -0.91
COL1A2-207ENST00000478215 PARD6GQ9BYG4 376 aaPredicted RBP9.38□□□□□ -0.91
COL1A2-207ENST00000478215 KMT2AQ03164 3969 aa9.37□□□□□ -0.91
COL1A2-207ENST00000478215 NACAE9PAV3 2078 aa9.37□□□□□ -0.91
COL1A2-207ENST00000478215 RNF222A6NCQ9 220 aa9.37□□□□□ -0.91
COL1A2-207ENST00000478215 CRXO43186 299 aaPredicted RBP9.37□□□□□ -0.91
COL1A2-207ENST00000478215 EIF3GO75821 320 aaKnown RBP eCLIP9.37□□□□□ -0.91
COL1A2-207ENST00000478215 BAP18Q8IXM2 172 aa9.37□□□□□ -0.91
COL1A2-207ENST00000478215 OR2T35Q8NGX2 323 aa9.37□□□□□ -0.91
COL1A2-207ENST00000478215 BLNKQ8WV28 456 aa9.37□□□□□ -0.91
COL1A2-207ENST00000478215 ASB13Q8WXK3 278 aa9.37□□□□□ -0.91
COL1A2-207ENST00000478215 IGF2BP2-AS1Q96M15 143 aa9.37□□□□□ -0.91
COL1A2-207ENST00000478215 MRPL32Q9BYC8 188 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms