RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 TMEM189A5PLL7 270 aa15.62■□□□□ 0.09
COL9A3-211ENST00000477612 INMT-MINDY4F8WBC2 141 aa15.62■□□□□ 0.09
COL9A3-211ENST00000477612 RPL29P47914 159 aaKnown RBP15.62■□□□□ 0.09
COL9A3-211ENST00000477612 CNN1P51911 297 aaKnown RBP15.62■□□□□ 0.09
COL9A3-211ENST00000477612 HBG1P69891 147 aa15.62■□□□□ 0.09
COL9A3-211ENST00000477612 HBG2P69892 147 aa15.62■□□□□ 0.09
COL9A3-211ENST00000477612 Q6ZTC4 211 aa15.62■□□□□ 0.09
COL9A3-211ENST00000477612 STX12Q86Y82 276 aa15.62■□□□□ 0.09
COL9A3-211ENST00000477612 RNF182Q8N6D2 247 aa15.62■□□□□ 0.09
COL9A3-211ENST00000477612 TRAV10A0A0B4J240 114 aa15.61■□□□□ 0.09
COL9A3-211ENST00000477612 COX7A2P2O60397 106 aa15.61■□□□□ 0.09
COL9A3-211ENST00000477612 AMBPP02760 352 aa15.61■□□□□ 0.09
COL9A3-211ENST00000477612 PSG3Q16557 428 aa15.61■□□□□ 0.09
COL9A3-211ENST00000477612 C12orf74Q32Q52 190 aa15.61■□□□□ 0.09
COL9A3-211ENST00000477612 Q6ZRG5 221 aa15.61■□□□□ 0.09
COL9A3-211ENST00000477612 BPIFA4PQ86YQ2 179 aa15.61■□□□□ 0.09
COL9A3-211ENST00000477612 IGF2BP2-AS1Q96M15 143 aa15.61■□□□□ 0.09
COL9A3-211ENST00000477612 DNAJC4Q9NNZ3 241 aa15.61■□□□□ 0.09
COL9A3-211ENST00000477612 OPCMLQ14982 345 aa15.6■□□□□ 0.09
COL9A3-211ENST00000477612 MORN5Q5VZ52 161 aa15.6■□□□□ 0.09
COL9A3-211ENST00000477612 C10orf113Q5VZT2 155 aa15.6■□□□□ 0.09
COL9A3-211ENST00000477612 MIC13Q5XKP0 118 aa15.6■□□□□ 0.09
COL9A3-211ENST00000477612 LCN15Q6UWW0 184 aa15.6■□□□□ 0.09
COL9A3-211ENST00000477612 OR11H7Q8NGC8 314 aa15.6■□□□□ 0.09
COL9A3-211ENST00000477612 ZNF331Q9NQX6 463 aaPredicted RBP15.6■□□□□ 0.09
COL9A3-211ENST00000477612 APLNQ9ULZ1 77 aa15.6■□□□□ 0.09
COL9A3-211ENST00000477612 GOLT1BQ9Y3E0 138 aa15.6■□□□□ 0.09
COL9A3-211ENST00000477612 RFNGQ9Y644 331 aa15.6■□□□□ 0.09
COL9A3-211ENST00000477612 CRXO43186 299 aaPredicted RBP15.59■□□□□ 0.09
COL9A3-211ENST00000477612 SIX6O95475 246 aa15.59■□□□□ 0.09
COL9A3-211ENST00000477612 CYCSP99999 105 aaKnown RBP15.59■□□□□ 0.09
COL9A3-211ENST00000477612 ZNF738Q8NE65 137 aa15.59■□□□□ 0.09
COL9A3-211ENST00000477612 OR1L4Q8NGR5 311 aa15.59■□□□□ 0.09
COL9A3-211ENST00000477612 SLC50A1Q9BRV3 221 aa15.59■□□□□ 0.09
COL9A3-211ENST00000477612 E5RGE8 158 aa15.58■□□□□ 0.08
COL9A3-211ENST00000477612 RLN2P04090 185 aa15.58■□□□□ 0.08
COL9A3-211ENST00000477612 OR8A1Q8NGG7 326 aa15.58■□□□□ 0.08
COL9A3-211ENST00000477612 PFDN5Q99471 154 aa15.58■□□□□ 0.08
COL9A3-211ENST00000477612 IGHV3OR16-12A0A075B7B8 117 aa15.57■□□□□ 0.08
COL9A3-211ENST00000477612 UBE2L5PA0A1B0GUS4 154 aa15.57■□□□□ 0.08
COL9A3-211ENST00000477612 IGLL5B9A064 214 aa15.57■□□□□ 0.08
COL9A3-211ENST00000477612 MPDU1O75352 247 aa15.57■□□□□ 0.08
COL9A3-211ENST00000477612 IGLC2P0DOY2 106 aa15.57■□□□□ 0.08
COL9A3-211ENST00000477612 DEFA1P59665 94 aa15.57■□□□□ 0.08
COL9A3-211ENST00000477612 DEFA3P59666 94 aa15.57■□□□□ 0.08
COL9A3-211ENST00000477612 LRRC20Q8TCA0 184 aa15.57■□□□□ 0.08
COL9A3-211ENST00000477612 SLC39A9Q9NUM3 307 aa15.57■□□□□ 0.08
COL9A3-211ENST00000477612 H0YIZ8 118 aa15.56■□□□□ 0.08
COL9A3-211ENST00000477612 SPART-AS1P0CW21 52 aa15.56■□□□□ 0.08
COL9A3-211ENST00000477612 B2MP61769 119 aa15.56■□□□□ 0.08
COL9A3-211ENST00000477612 NHLH2Q02577 135 aa15.56■□□□□ 0.08
COL9A3-211ENST00000477612 BAXQ07812 192 aa15.56■□□□□ 0.08
COL9A3-211ENST00000477612 SAT2Q96F10 170 aaPredicted RBP15.56■□□□□ 0.08
COL9A3-211ENST00000477612 RNF126Q9BV68 326 aa15.56■□□□□ 0.08
COL9A3-211ENST00000477612 SLC25A31Q9H0C2 315 aa15.56■□□□□ 0.08
COL9A3-211ENST00000477612 TEX48A0A1B0GUV7 120 aa15.55■□□□□ 0.08
COL9A3-211ENST00000477612 HBE1P02100 147 aa15.55■□□□□ 0.08
COL9A3-211ENST00000477612 SPINK13Q1W4C9 94 aa15.55■□□□□ 0.08
COL9A3-211ENST00000477612 OR5AC2Q9NZP5 309 aa15.55■□□□□ 0.08
COL9A3-211ENST00000477612 DKK2Q9UBU2 259 aa15.55■□□□□ 0.08
COL9A3-211ENST00000477612 DEFB131BA0A096LNP1 70 aa15.54■□□□□ 0.08
COL9A3-211ENST00000477612 H3BQ15 152 aa15.54■□□□□ 0.08
COL9A3-211ENST00000477612 BOLA2-SMG1P6H3BVE0 249 aa15.54■□□□□ 0.08
COL9A3-211ENST00000477612 M0R2Z0 102 aa15.54■□□□□ 0.08
COL9A3-211ENST00000477612 FGF7P21781 194 aa15.54■□□□□ 0.08
COL9A3-211ENST00000477612 H2BFSP57053 126 aa15.54■□□□□ 0.08
COL9A3-211ENST00000477612 GUK1Q16774 197 aa15.54■□□□□ 0.08
COL9A3-211ENST00000477612 RRN3P1Q2M238 152 aa15.54■□□□□ 0.08
COL9A3-211ENST00000477612 RPUSD4Q96CM3 377 aaKnown RBP15.54■□□□□ 0.08
COL9A3-211ENST00000477612 PXMP4Q9Y6I8 212 aa15.54■□□□□ 0.08
COL9A3-211ENST00000477612 BIRC6Q9NR09 4857 aa15.53■□□□□ 0.08
COL9A3-211ENST00000477612 IGHV4-4A0A075B6R2 117 aa15.53■□□□□ 0.08
COL9A3-211ENST00000477612 TRAV5A0A0B4J249 113 aa15.53■□□□□ 0.08
COL9A3-211ENST00000477612 INSP01308 110 aa15.53■□□□□ 0.08
COL9A3-211ENST00000477612 HIST1H1AQ02539 215 aaPredicted RBP15.53■□□□□ 0.08
COL9A3-211ENST00000477612 OXA1LQ15070 435 aa15.53■□□□□ 0.08
COL9A3-211ENST00000477612 ZNF767PQ75MW2 155 aa15.53■□□□□ 0.08
COL9A3-211ENST00000477612 OR5C1Q8NGR4 320 aa15.53■□□□□ 0.08
COL9A3-211ENST00000477612 NPCDR1Q9BY65 106 aa15.53■□□□□ 0.08
COL9A3-211ENST00000477612 DNAH6Q9C0G6 4158 aa15.53■□□□□ 0.08
COL9A3-211ENST00000477612 LOC102723971A0A1B0GUV8 181 aa15.52■□□□□ 0.08
COL9A3-211ENST00000477612 SLC17A3O00476 420 aa15.52■□□□□ 0.08
COL9A3-211ENST00000477612 ZNF253O75346 499 aa15.52■□□□□ 0.08
COL9A3-211ENST00000477612 LRRC37A5PQ49AS3 106 aa15.52■□□□□ 0.08
COL9A3-211ENST00000477612 PPP1R1CQ8WVI7 109 aa15.52■□□□□ 0.08
COL9A3-211ENST00000477612 SNRPCP09234 159 aaKnown RBP15.51■□□□□ 0.07
COL9A3-211ENST00000477612 EMP1P54849 157 aa15.51■□□□□ 0.07
COL9A3-211ENST00000477612 FAM222AQ5U5X8 452 aa15.51■□□□□ 0.07
COL9A3-211ENST00000477612 NIPSNAP3BQ9BS92 247 aa15.51■□□□□ 0.07
COL9A3-211ENST00000477612 TMEM208Q9BTX3 173 aa15.51■□□□□ 0.07
COL9A3-211ENST00000477612 TMEM14CQ9P0S9 112 aa15.51■□□□□ 0.07
COL9A3-211ENST00000477612 YTHDF2Q9Y5A9 579 aaKnown RBP15.51■□□□□ 0.07
COL9A3-211ENST00000477612 TSPOP30536 169 aa15.5■□□□□ 0.07
COL9A3-211ENST00000477612 RHOBP62745 196 aa15.5■□□□□ 0.07
COL9A3-211ENST00000477612 BAP18Q8IXM2 172 aa15.5■□□□□ 0.07
COL9A3-211ENST00000477612 ZNF586Q9NXT0 402 aa15.5■□□□□ 0.07
COL9A3-211ENST00000477612 TRAV12-2A0A075B6T6 113 aa15.49■□□□□ 0.07
COL9A3-211ENST00000477612 H3BTX0 84 aa15.49■□□□□ 0.07
COL9A3-211ENST00000477612 MPC2O95563 127 aa15.49■□□□□ 0.07
COL9A3-211ENST00000477612 CDKN1BP46527 198 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms