RNA–Protein interactions for RNA: ENST00000477276.2

PTPN23-204, Transcript of protein tyrosine phosphatase, non-receptor type 23, human

TSL 5

Gene PTPN23, Length 882 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN23-204	ENST00000477276	CXCL2	P19875	107 aa		12.85	□□□□□ -0.35
PTPN23-204	ENST00000477276	MORN3	Q6PF18	240 aa	Predicted RBP	12.85	□□□□□ -0.35
PTPN23-204	ENST00000477276	ZNF709	Q8N972	641 aa		12.85	□□□□□ -0.35
PTPN23-204	ENST00000477276	CSNK1G2-AS1	Q8NCQ2	148 aa		12.85	□□□□□ -0.35
PTPN23-204	ENST00000477276	FAM167A-AS1	Q96KT0	104 aa		12.85	□□□□□ -0.35
PTPN23-204	ENST00000477276	SLC25A2	Q9BXI2	301 aa		12.85	□□□□□ -0.35
PTPN23-204	ENST00000477276	ZNF331	Q9NQX6	463 aa	Predicted RBP	12.85	□□□□□ -0.35
PTPN23-204	ENST00000477276	KCNIP2	Q9NS61	270 aa		12.85	□□□□□ -0.35
PTPN23-204	ENST00000477276	RNF24	Q9Y225	148 aa		12.85	□□□□□ -0.35
PTPN23-204	ENST00000477276	FXYD6-FXYD2	A0A087WZ82	144 aa		12.84	□□□□□ -0.35
PTPN23-204	ENST00000477276	SMLR1	H3BR10	107 aa		12.84	□□□□□ -0.35
PTPN23-204	ENST00000477276	LCN15	Q6UWW0	184 aa		12.84	□□□□□ -0.35
PTPN23-204	ENST00000477276	MIR17HG	Q75NE6	70 aa		12.84	□□□□□ -0.35
PTPN23-204	ENST00000477276	SAT2	Q96F10	170 aa	Predicted RBP	12.84	□□□□□ -0.35
PTPN23-204	ENST00000477276	CLUHP3	Q96NS8	147 aa		12.84	□□□□□ -0.35
PTPN23-204	ENST00000477276	HRH4	Q9H3N8	390 aa		12.84	□□□□□ -0.35
PTPN23-204	ENST00000477276	RPRM	Q9NS64	109 aa		12.84	□□□□□ -0.35
PTPN23-204	ENST00000477276	C17orf112	F2Z3M2	114 aa		12.83	□□□□□ -0.36
PTPN23-204	ENST00000477276	IFNA5	P01569	189 aa		12.83	□□□□□ -0.36
PTPN23-204	ENST00000477276	PRB4	P10163	310 aa	Predicted RBP	12.83	□□□□□ -0.36
PTPN23-204	ENST00000477276	FAM78B	Q5VT40	261 aa		12.83	□□□□□ -0.36
PTPN23-204	ENST00000477276	ZNF586	Q9NXT0	402 aa		12.83	□□□□□ -0.36
PTPN23-204	ENST00000477276	TMEM14C	Q9P0S9	112 aa		12.83	□□□□□ -0.36
PTPN23-204	ENST00000477276	PYY	P10082	97 aa		12.82	□□□□□ -0.36
PTPN23-204	ENST00000477276	FFAR4	Q5NUL3	377 aa		12.82	□□□□□ -0.36
PTPN23-204	ENST00000477276	AMTN	Q6UX39	209 aa		12.82	□□□□□ -0.36
PTPN23-204	ENST00000477276	MUC7	Q8TAX7	377 aa		12.82	□□□□□ -0.36
PTPN23-204	ENST00000477276	CLEC5A	Q9NY25	188 aa		12.82	□□□□□ -0.36
PTPN23-204	ENST00000477276	SACS	Q9NZJ4	4579 aa		12.81	□□□□□ -0.36
PTPN23-204	ENST00000477276	IGKV3-20	P01619	116 aa		12.81	□□□□□ -0.36
PTPN23-204	ENST00000477276	ZNF705D	P0CH99	300 aa	Predicted RBP	12.81	□□□□□ -0.36
PTPN23-204	ENST00000477276	ZNF705B	P0CI00	300 aa	Predicted RBP	12.81	□□□□□ -0.36
PTPN23-204	ENST00000477276	PSG3	Q16557	428 aa		12.81	□□□□□ -0.36
PTPN23-204	ENST00000477276	ZNF738	Q8NE65	137 aa		12.81	□□□□□ -0.36
PTPN23-204	ENST00000477276	SCGB1C1	Q8TD33	95 aa		12.81	□□□□□ -0.36
PTPN23-204	ENST00000477276	ZNF503	Q96F45	646 aa		12.81	□□□□□ -0.36
PTPN23-204	ENST00000477276	SLC50A1	Q9BRV3	221 aa		12.81	□□□□□ -0.36
PTPN23-204	ENST00000477276	MRPL32	Q9BYC8	188 aa	Known RBP	12.81	□□□□□ -0.36
PTPN23-204	ENST00000477276	SLC35B3	Q9H1N7	401 aa		12.81	□□□□□ -0.36
PTPN23-204	ENST00000477276	FUT9	Q9Y231	359 aa		12.81	□□□□□ -0.36
PTPN23-204	ENST00000477276	TIMM9	Q9Y5J7	89 aa		12.81	□□□□□ -0.36
PTPN23-204	ENST00000477276	TRBV19	A0A075B6N1	114 aa		12.8	□□□□□ -0.36
PTPN23-204	ENST00000477276		A0A0J9YWU9	116 aa		12.8	□□□□□ -0.36
PTPN23-204	ENST00000477276	ZNF705E	A8MWA4	302 aa	Predicted RBP	12.8	□□□□□ -0.36
PTPN23-204	ENST00000477276	NDUFB4	O95168	129 aa		12.8	□□□□□ -0.36
PTPN23-204	ENST00000477276	TMEM41B	Q5BJD5	291 aa		12.8	□□□□□ -0.36
PTPN23-204	ENST00000477276	EBLN2	Q6P2I7	272 aa		12.8	□□□□□ -0.36
PTPN23-204	ENST00000477276	OR11H2	Q8NH07	326 aa		12.8	□□□□□ -0.36
PTPN23-204	ENST00000477276	ZNF705F	A8MVS1	300 aa	Predicted RBP	12.79	□□□□□ -0.36
PTPN23-204	ENST00000477276	PRAC2	D3DTV9	90 aa		12.79	□□□□□ -0.36
PTPN23-204	ENST00000477276	ZNF253	O75346	499 aa		12.79	□□□□□ -0.36
PTPN23-204	ENST00000477276	EIF3G	O75821	320 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
PTPN23-204	ENST00000477276	CNN1	P51911	297 aa	Known RBP	12.79	□□□□□ -0.36
PTPN23-204	ENST00000477276	FXYD7	P58549	80 aa		12.79	□□□□□ -0.36
PTPN23-204	ENST00000477276	ZNF266	Q14584	549 aa		12.79	□□□□□ -0.36
PTPN23-204	ENST00000477276		Q6ZNX1	250 aa		12.79	□□□□□ -0.36
PTPN23-204	ENST00000477276	HSD17B11	Q8NBQ5	300 aa		12.79	□□□□□ -0.36
PTPN23-204	ENST00000477276	OR11H4	Q8NGC9	324 aa		12.79	□□□□□ -0.36
PTPN23-204	ENST00000477276	OR4B1	Q8NGF8	309 aa		12.79	□□□□□ -0.36
PTPN23-204	ENST00000477276	RARRES2	Q99969	163 aa		12.79	□□□□□ -0.36
PTPN23-204	ENST00000477276	XCL2	Q9UBD3	114 aa		12.79	□□□□□ -0.36
PTPN23-204	ENST00000477276		X6R8D5	127 aa		12.79	□□□□□ -0.36
PTPN23-204	ENST00000477276	RYR3	Q15413	4870 aa		12.78	□□□□□ -0.36
PTPN23-204	ENST00000477276	HIST1H1E	P10412	219 aa	Known RBP	12.78	□□□□□ -0.36
PTPN23-204	ENST00000477276	ATP6V0C	P27449	155 aa		12.78	□□□□□ -0.36
PTPN23-204	ENST00000477276	RAB2A	P61019	212 aa		12.78	□□□□□ -0.36
PTPN23-204	ENST00000477276	GUK1	Q16774	197 aa		12.78	□□□□□ -0.36
PTPN23-204	ENST00000477276	RPL7L1	Q6DKI1	246 aa	Known RBP	12.78	□□□□□ -0.36
PTPN23-204	ENST00000477276		Q8NAQ8	132 aa		12.78	□□□□□ -0.36
PTPN23-204	ENST00000477276	INO80E	Q8NBZ0	244 aa	Predicted RBP	12.78	□□□□□ -0.36
PTPN23-204	ENST00000477276	OR8A1	Q8NGG7	326 aa		12.78	□□□□□ -0.36
PTPN23-204	ENST00000477276	OR2G3	Q8NGZ4	309 aa		12.78	□□□□□ -0.36
PTPN23-204	ENST00000477276	LRRC20	Q8TCA0	184 aa		12.78	□□□□□ -0.36
PTPN23-204	ENST00000477276	RPUSD4	Q96CM3	377 aa	Known RBP	12.78	□□□□□ -0.36
PTPN23-204	ENST00000477276	FXYD5	Q96DB9	178 aa		12.78	□□□□□ -0.36
PTPN23-204	ENST00000477276	MFF	Q9GZY8	342 aa		12.78	□□□□□ -0.36
PTPN23-204	ENST00000477276	ARPC5	O15511	151 aa		12.77	□□□□□ -0.37
PTPN23-204	ENST00000477276	NUTF2	P61970	127 aa	Known RBP	12.77	□□□□□ -0.37
PTPN23-204	ENST00000477276	PSG9	Q00887	426 aa		12.77	□□□□□ -0.37
PTPN23-204	ENST00000477276	PSMG3	Q9BT73	122 aa	Predicted RBP	12.77	□□□□□ -0.37
PTPN23-204	ENST00000477276	SH3BGRL3	Q9H299	93 aa		12.77	□□□□□ -0.37
PTPN23-204	ENST00000477276	C11orf68	Q9H3H3	251 aa	Known RBP	12.77	□□□□□ -0.37
PTPN23-204	ENST00000477276	C3orf84	H3BNL1	204 aa		12.76	□□□□□ -0.37
PTPN23-204	ENST00000477276	M6PR	P20645	277 aa		12.76	□□□□□ -0.37
PTPN23-204	ENST00000477276	PDE6H	Q13956	83 aa		12.76	□□□□□ -0.37
PTPN23-204	ENST00000477276	CASC10	Q5T4H9	136 aa		12.76	□□□□□ -0.37
PTPN23-204	ENST00000477276	ZNF705A	Q6ZN79	300 aa	Predicted RBP	12.76	□□□□□ -0.37
PTPN23-204	ENST00000477276	OR51M1	Q9H341	326 aa		12.76	□□□□□ -0.37
PTPN23-204	ENST00000477276	CYTL1	Q9NRR1	136 aa		12.76	□□□□□ -0.37
PTPN23-204	ENST00000477276	RYR2	Q92736	4967 aa		12.76	□□□□□ -0.37
PTPN23-204	ENST00000477276		M0R3E3	92 aa		12.75	□□□□□ -0.37
PTPN23-204	ENST00000477276	CRX	O43186	299 aa	Predicted RBP	12.75	□□□□□ -0.37
PTPN23-204	ENST00000477276	DUSP14	O95147	198 aa	Known RBP	12.75	□□□□□ -0.37
PTPN23-204	ENST00000477276	OR10J4	P0C629	311 aa		12.75	□□□□□ -0.37
PTPN23-204	ENST00000477276	RHOB	P62745	196 aa		12.75	□□□□□ -0.37
PTPN23-204	ENST00000477276	HIST1H1A	Q02539	215 aa	Predicted RBP	12.75	□□□□□ -0.37
PTPN23-204	ENST00000477276	IL17D	Q8TAD2	202 aa		12.75	□□□□□ -0.37
PTPN23-204	ENST00000477276	BLNK	Q8WV28	456 aa		12.75	□□□□□ -0.37
PTPN23-204	ENST00000477276	PHYHIPL	Q96FC7	376 aa		12.75	□□□□□ -0.37
PTPN23-204	ENST00000477276	ST6GAL2	Q96JF0	529 aa		12.75	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms