RNA–Protein interactions for RNA: ENST00000476930.1

PTPRN-213, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-213ENST00000476930 MORN5Q5VZ52 161 aa7.97□□□□□ -1.13
PTPRN-213ENST00000476930 LINC00305Q7Z4B0 112 aa7.97□□□□□ -1.13
PTPRN-213ENST00000476930 ZNF546Q86UE3 836 aa7.97□□□□□ -1.13
PTPRN-213ENST00000476930 ZNF738Q8NE65 137 aa7.97□□□□□ -1.13
PTPRN-213ENST00000476930 TMEM37Q8WXS4 190 aa7.97□□□□□ -1.13
PTPRN-213ENST00000476930 C2orf50Q96LR7 162 aa7.97□□□□□ -1.13
PTPRN-213ENST00000476930 RNF126Q9BV68 326 aa7.97□□□□□ -1.13
PTPRN-213ENST00000476930 DKK2Q9UBU2 259 aa7.97□□□□□ -1.13
PTPRN-213ENST00000476930 GOLT1BQ9Y3E0 138 aa7.97□□□□□ -1.13
PTPRN-213ENST00000476930 LOC102723971A0A1B0GUV8 181 aa7.96□□□□□ -1.14
PTPRN-213ENST00000476930 TMEM189A5PLL7 270 aa7.96□□□□□ -1.14
PTPRN-213ENST00000476930 DUSP14O95147 198 aaKnown RBP7.96□□□□□ -1.14
PTPRN-213ENST00000476930 HBE1P02100 147 aa7.96□□□□□ -1.14
PTPRN-213ENST00000476930 SPART-AS1P0CW21 52 aa7.96□□□□□ -1.14
PTPRN-213ENST00000476930 CXCL3P19876 107 aa7.96□□□□□ -1.14
PTPRN-213ENST00000476930 CAV2P51636 162 aa7.96□□□□□ -1.14
PTPRN-213ENST00000476930 S100A10P60903 97 aa7.96□□□□□ -1.14
PTPRN-213ENST00000476930 ASAH1Q13510 395 aa7.96□□□□□ -1.14
PTPRN-213ENST00000476930 FAM222AQ5U5X8 452 aa7.96□□□□□ -1.14
PTPRN-213ENST00000476930 LINC00299Q6ZSB3 139 aa7.96□□□□□ -1.14
PTPRN-213ENST00000476930 IGF2BP2-AS1Q96M15 143 aa7.96□□□□□ -1.14
PTPRN-213ENST00000476930 TRAV12-2A0A075B6T6 113 aa7.95□□□□□ -1.14
PTPRN-213ENST00000476930 IGSF23A1L1A6 192 aa7.95□□□□□ -1.14
PTPRN-213ENST00000476930 A6NHS1 94 aa7.95□□□□□ -1.14
PTPRN-213ENST00000476930 H3BTX0 84 aa7.95□□□□□ -1.14
PTPRN-213ENST00000476930 COX7A2P2O60397 106 aa7.95□□□□□ -1.14
PTPRN-213ENST00000476930 AMBPP02760 352 aa7.95□□□□□ -1.14
PTPRN-213ENST00000476930 CAMLGP49069 296 aa7.95□□□□□ -1.14
PTPRN-213ENST00000476930 IFITM3Q01628 133 aa7.95□□□□□ -1.14
PTPRN-213ENST00000476930 HIST1H1AQ02539 215 aaPredicted RBP7.95□□□□□ -1.14
PTPRN-213ENST00000476930 RAB32Q13637 225 aa7.95□□□□□ -1.14
PTPRN-213ENST00000476930 PSG3Q16557 428 aa7.95□□□□□ -1.14
PTPRN-213ENST00000476930 RRN3P1Q2M238 152 aa7.95□□□□□ -1.14
PTPRN-213ENST00000476930 PXDC1Q5TGL8 231 aa7.95□□□□□ -1.14
PTPRN-213ENST00000476930 MIC13Q5XKP0 118 aa7.95□□□□□ -1.14
PTPRN-213ENST00000476930 MZT2BQ6NZ67 158 aa7.95□□□□□ -1.14
PTPRN-213ENST00000476930 NRARPQ7Z6K4 114 aa7.95□□□□□ -1.14
PTPRN-213ENST00000476930 BAP18Q8IXM2 172 aa7.95□□□□□ -1.14
PTPRN-213ENST00000476930 OR8A1Q8NGG7 326 aa7.95□□□□□ -1.14
PTPRN-213ENST00000476930 LRRC20Q8TCA0 184 aa7.95□□□□□ -1.14
PTPRN-213ENST00000476930 S100ZQ8WXG8 99 aa7.95□□□□□ -1.14
PTPRN-213ENST00000476930 TMEM208Q9BTX3 173 aa7.95□□□□□ -1.14
PTPRN-213ENST00000476930 YTHDF2Q9Y5A9 579 aaKnown RBP7.95□□□□□ -1.14
PTPRN-213ENST00000476930 DNAH11Q96DT5 4516 aa7.94□□□□□ -1.14
PTPRN-213ENST00000476930 HERC2O95714 4834 aa7.94□□□□□ -1.14
PTPRN-213ENST00000476930 TRAV5A0A0B4J249 113 aa7.94□□□□□ -1.14
PTPRN-213ENST00000476930 ZNF705GA8MUZ8 300 aaPredicted RBP7.94□□□□□ -1.14
PTPRN-213ENST00000476930 SLC17A3O00476 420 aa7.94□□□□□ -1.14
PTPRN-213ENST00000476930 OPCMLQ14982 345 aa7.94□□□□□ -1.14
PTPRN-213ENST00000476930 C10orf113Q5VZT2 155 aa7.94□□□□□ -1.14
PTPRN-213ENST00000476930 S100A7AQ86SG5 101 aa7.94□□□□□ -1.14
PTPRN-213ENST00000476930 TMEM252Q8N6L7 170 aa7.94□□□□□ -1.14
PTPRN-213ENST00000476930 NIPSNAP3BQ9BS92 247 aa7.94□□□□□ -1.14
PTPRN-213ENST00000476930 LYRM2Q9NU23 88 aaPredicted RBP7.94□□□□□ -1.14
PTPRN-213ENST00000476930 UQCC1Q9NVA1 299 aa7.94□□□□□ -1.14
PTPRN-213ENST00000476930 WDR83OSQ9Y284 106 aa7.94□□□□□ -1.14
PTPRN-213ENST00000476930 UBE2L5PA0A1B0GUS4 154 aa7.93□□□□□ -1.14
PTPRN-213ENST00000476930 PRAC2D3DTV9 90 aa7.93□□□□□ -1.14
PTPRN-213ENST00000476930 H3BQ15 152 aa7.93□□□□□ -1.14
PTPRN-213ENST00000476930 BOLA2-SMG1P6H3BVE0 249 aa7.93□□□□□ -1.14
PTPRN-213ENST00000476930 UPK1BO75841 260 aa7.93□□□□□ -1.14
PTPRN-213ENST00000476930 SIX6O95475 246 aa7.93□□□□□ -1.14
PTPRN-213ENST00000476930 INSP01308 110 aa7.93□□□□□ -1.14
PTPRN-213ENST00000476930 AZU1P20160 251 aa7.93□□□□□ -1.14
PTPRN-213ENST00000476930 PVALBP20472 110 aaPredicted RBP7.93□□□□□ -1.14
PTPRN-213ENST00000476930 SULT1A1P50225 295 aa7.93□□□□□ -1.14
PTPRN-213ENST00000476930 RHOBP62745 196 aa7.93□□□□□ -1.14
PTPRN-213ENST00000476930 VWC2Q2TAL6 325 aa7.93□□□□□ -1.14
PTPRN-213ENST00000476930 LCN15Q6UWW0 184 aa7.93□□□□□ -1.14
PTPRN-213ENST00000476930 BPIFA4PQ86YQ2 179 aa7.93□□□□□ -1.14
PTPRN-213ENST00000476930 RPUSD4Q96CM3 377 aaKnown RBP7.93□□□□□ -1.14
PTPRN-213ENST00000476930 NDUFAF3Q9BU61 184 aa7.93□□□□□ -1.14
PTPRN-213ENST00000476930 DNAJC4Q9NNZ3 241 aa7.93□□□□□ -1.14
PTPRN-213ENST00000476930 ZNF331Q9NQX6 463 aaPredicted RBP7.93□□□□□ -1.14
PTPRN-213ENST00000476930 IGLC2P0DOY2 106 aa7.92□□□□□ -1.14
PTPRN-213ENST00000476930 HTN3P15516 51 aa7.92□□□□□ -1.14
PTPRN-213ENST00000476930 S100A11P31949 105 aa7.92□□□□□ -1.14
PTPRN-213ENST00000476930 BAXQ07812 192 aa7.92□□□□□ -1.14
PTPRN-213ENST00000476930 RAB31Q13636 194 aa7.92□□□□□ -1.14
PTPRN-213ENST00000476930 KIR3DS1Q14943 382 aa7.92□□□□□ -1.14
PTPRN-213ENST00000476930 Q6ZRG5 221 aa7.92□□□□□ -1.14
PTPRN-213ENST00000476930 ENKURQ8TC29 256 aa7.92□□□□□ -1.14
PTPRN-213ENST00000476930 SAT2Q96F10 170 aaPredicted RBP7.92□□□□□ -1.14
PTPRN-213ENST00000476930 PARD6GQ9BYG4 376 aaPredicted RBP7.92□□□□□ -1.14
PTPRN-213ENST00000476930 RNF24Q9Y225 148 aa7.92□□□□□ -1.14
PTPRN-213ENST00000476930 TEX48A0A1B0GUV7 120 aa7.91□□□□□ -1.14
PTPRN-213ENST00000476930 PLAC8L1A1L4L8 177 aa7.91□□□□□ -1.14
PTPRN-213ENST00000476930 CXCL2P19875 107 aa7.91□□□□□ -1.14
PTPRN-213ENST00000476930 FGF7P21781 194 aa7.91□□□□□ -1.14
PTPRN-213ENST00000476930 RPL29P47914 159 aaKnown RBP7.91□□□□□ -1.14
PTPRN-213ENST00000476930 NHLH2Q02577 135 aa7.91□□□□□ -1.14
PTPRN-213ENST00000476930 OXA1LQ15070 435 aa7.91□□□□□ -1.14
PTPRN-213ENST00000476930 FCN2Q15485 313 aa7.91□□□□□ -1.14
PTPRN-213ENST00000476930 STX12Q86Y82 276 aa7.91□□□□□ -1.14
PTPRN-213ENST00000476930 OR1L4Q8NGR5 311 aa7.91□□□□□ -1.14
PTPRN-213ENST00000476930 LINC01587Q99440 93 aa7.91□□□□□ -1.14
PTPRN-213ENST00000476930 SLC50A1Q9BRV3 221 aa7.91□□□□□ -1.14
PTPRN-213ENST00000476930 GPN1Q9HCN4 374 aaPredicted RBP7.91□□□□□ -1.14
PTPRN-213ENST00000476930 SLC39A9Q9NUM3 307 aa7.91□□□□□ -1.14
PTPRN-213ENST00000476930 PPP1R14DQ9NXH3 145 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms