RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 IGHV4OR15-8A0A075B7B6 117 aa9.37□□□□□ -0.91
MRPL55-227ENST00000475832 A0A087WW49 117 aa9.37□□□□□ -0.91
MRPL55-227ENST00000475832 IGHV7-4-1A0A0J9YVY3 117 aa9.37□□□□□ -0.91
MRPL55-227ENST00000475832 PGPA6NDG6 321 aa9.37□□□□□ -0.91
MRPL55-227ENST00000475832 K7EQM0 130 aa9.37□□□□□ -0.91
MRPL55-227ENST00000475832 SLC25A5P05141 298 aaKnown RBP9.37□□□□□ -0.91
MRPL55-227ENST00000475832 IGLC2P0DOY2 106 aa9.37□□□□□ -0.91
MRPL55-227ENST00000475832 HOXD3P31249 432 aaPredicted RBP9.37□□□□□ -0.91
MRPL55-227ENST00000475832 CSN1S1P47710 185 aa9.37□□□□□ -0.91
MRPL55-227ENST00000475832 DEFA6Q01524 100 aa9.37□□□□□ -0.91
MRPL55-227ENST00000475832 ZNF674Q2M3X9 581 aa9.37□□□□□ -0.91
MRPL55-227ENST00000475832 UNQ9165/PRO28630Q6UXU0 137 aa9.37□□□□□ -0.91
MRPL55-227ENST00000475832 HIST1H2BAQ96A08 127 aa9.37□□□□□ -0.91
MRPL55-227ENST00000475832 SMIM7Q9BQ49 75 aa9.37□□□□□ -0.91
MRPL55-227ENST00000475832 Q9H3A6 140 aa9.37□□□□□ -0.91
MRPL55-227ENST00000475832 CLEC5AQ9NY25 188 aa9.37□□□□□ -0.91
MRPL55-227ENST00000475832 PEMTQ9UBM1 199 aa9.37□□□□□ -0.91
MRPL55-227ENST00000475832 U3KQE9 123 aa9.37□□□□□ -0.91
MRPL55-227ENST00000475832 A0A087X0K7 114 aa9.36□□□□□ -0.91
MRPL55-227ENST00000475832 GGTLC3B5MD39 225 aa9.36□□□□□ -0.91
MRPL55-227ENST00000475832 ZNF253O75346 499 aa9.36□□□□□ -0.91
MRPL55-227ENST00000475832 S100A9P06702 114 aaKnown RBP9.36□□□□□ -0.91
MRPL55-227ENST00000475832 CD28P10747 220 aa9.36□□□□□ -0.91
MRPL55-227ENST00000475832 AKR1C3P42330 323 aa9.36□□□□□ -0.91
MRPL55-227ENST00000475832 CNN1P51911 297 aaKnown RBP9.36□□□□□ -0.91
MRPL55-227ENST00000475832 PROK1P58294 105 aa9.36□□□□□ -0.91
MRPL55-227ENST00000475832 PNRC1Q12796 327 aaPredicted RBP9.36□□□□□ -0.91
MRPL55-227ENST00000475832 FOXL1Q12952 345 aa9.36□□□□□ -0.91
MRPL55-227ENST00000475832 SAMD13Q5VXD3 122 aa9.36□□□□□ -0.91
MRPL55-227ENST00000475832 C16orf54Q6UWD8 224 aa9.36□□□□□ -0.91
MRPL55-227ENST00000475832 SIGLEC15Q6ZMC9 328 aa9.36□□□□□ -0.91
MRPL55-227ENST00000475832 C5orf17Q8NAS9 161 aa9.36□□□□□ -0.91
MRPL55-227ENST00000475832 OR11H1Q8NG94 326 aa9.36□□□□□ -0.91
MRPL55-227ENST00000475832 WIPF2Q8TF74 440 aaPredicted RBP9.36□□□□□ -0.91
MRPL55-227ENST00000475832 C11orf52Q96A22 123 aa9.36□□□□□ -0.91
MRPL55-227ENST00000475832 TVP23CQ96ET8 276 aa9.36□□□□□ -0.91
MRPL55-227ENST00000475832 ZNF414Q96IQ9 312 aa9.36□□□□□ -0.91
MRPL55-227ENST00000475832 SLC50A1Q9BRV3 221 aa9.36□□□□□ -0.91
MRPL55-227ENST00000475832 PARLQ9H300 379 aa9.36□□□□□ -0.91
MRPL55-227ENST00000475832 ZNF586Q9NXT0 402 aa9.36□□□□□ -0.91
MRPL55-227ENST00000475832 IGHV3OR16-13A0A075B7E8 117 aa9.35□□□□□ -0.91
MRPL55-227ENST00000475832 IGHV3-49A0A0A0MS15 119 aa9.35□□□□□ -0.91
MRPL55-227ENST00000475832 IGHV3-74A0A0B4J1X5 117 aa9.35□□□□□ -0.91
MRPL55-227ENST00000475832 IGHV3-66A0A0C4DH42 116 aa9.35□□□□□ -0.91
MRPL55-227ENST00000475832 SCO2A0A1W2PP80 73 aa9.35□□□□□ -0.91
MRPL55-227ENST00000475832 A8MWP6 167 aa9.35□□□□□ -0.91
MRPL55-227ENST00000475832 H3BQ15 152 aa9.35□□□□□ -0.91
MRPL55-227ENST00000475832 M0R036 132 aa9.35□□□□□ -0.91
MRPL55-227ENST00000475832 NDUFB4O95168 129 aa9.35□□□□□ -0.91
MRPL55-227ENST00000475832 SNRPCP09234 159 aaKnown RBP9.35□□□□□ -0.91
MRPL55-227ENST00000475832 ADCYAP1P18509 176 aa9.35□□□□□ -0.91
MRPL55-227ENST00000475832 SYNJ2BPP57105 145 aa9.35□□□□□ -0.91
MRPL55-227ENST00000475832 TMEM241Q24JQ0 296 aa9.35□□□□□ -0.91
MRPL55-227ENST00000475832 TCTEX1D4Q5JR98 221 aa9.35□□□□□ -0.91
MRPL55-227ENST00000475832 CCDC28AQ8IWP9 274 aa9.35□□□□□ -0.91
MRPL55-227ENST00000475832 RHPN1-AS1Q9BWJ2 59 aa9.35□□□□□ -0.91
MRPL55-227ENST00000475832 NAT8Q9UHE5 227 aa9.35□□□□□ -0.91
MRPL55-227ENST00000475832 SMPXQ9UHP9 88 aa9.35□□□□□ -0.91
MRPL55-227ENST00000475832 PRELID1Q9Y255 219 aa9.35□□□□□ -0.91
MRPL55-227ENST00000475832 SERTM2A0A1B0GWG4 89 aa9.34□□□□□ -0.91
MRPL55-227ENST00000475832 H3BTX0 84 aa9.34□□□□□ -0.91
MRPL55-227ENST00000475832 PEX7O00628 323 aa9.34□□□□□ -0.91
MRPL55-227ENST00000475832 MRPS12O15235 138 aaKnown RBP9.34□□□□□ -0.91
MRPL55-227ENST00000475832 UBE2G1P62253 170 aa9.34□□□□□ -0.91
MRPL55-227ENST00000475832 RPL11P62913 178 aaKnown RBP9.34□□□□□ -0.91
MRPL55-227ENST00000475832 KLF5Q13887 457 aaPredicted RBP9.34□□□□□ -0.91
MRPL55-227ENST00000475832 TM4SF20Q53R12 229 aa9.34□□□□□ -0.91
MRPL55-227ENST00000475832 FAM90A2PQ658T7 463 aa9.34□□□□□ -0.91
MRPL55-227ENST00000475832 ARL6IP6Q8N6S5 226 aa9.34□□□□□ -0.91
MRPL55-227ENST00000475832 C11orf44Q8N8P7 122 aa9.34□□□□□ -0.91
MRPL55-227ENST00000475832 CITED2Q99967 270 aaPredicted RBP9.34□□□□□ -0.91
MRPL55-227ENST00000475832 ATG101Q9BSB4 218 aa9.34□□□□□ -0.91
MRPL55-227ENST00000475832 EPDR1Q9UM22 224 aa9.34□□□□□ -0.91
MRPL55-227ENST00000475832 A0A1W2PRX2 142 aa9.33□□□□□ -0.92
MRPL55-227ENST00000475832 B4DEV8 164 aa9.33□□□□□ -0.92
MRPL55-227ENST00000475832 CHEK1O14757 476 aa9.33□□□□□ -0.92
MRPL55-227ENST00000475832 APOHP02749 345 aaPredicted RBP9.33□□□□□ -0.92
MRPL55-227ENST00000475832 MYCNOSP40205 109 aa9.33□□□□□ -0.92
MRPL55-227ENST00000475832 TAS2R60P59551 318 aa9.33□□□□□ -0.92
MRPL55-227ENST00000475832 C8orf86Q6ZUL3 223 aa9.33□□□□□ -0.92
MRPL55-227ENST00000475832 CLRN3Q8NCR9 226 aa9.33□□□□□ -0.92
MRPL55-227ENST00000475832 GLMPQ8WWB7 406 aa9.33□□□□□ -0.92
MRPL55-227ENST00000475832 RPH3ALQ9UNE2 315 aa9.33□□□□□ -0.92
MRPL55-227ENST00000475832 FBLL1A6NHQ2 334 aaKnown RBP9.32□□□□□ -0.92
MRPL55-227ENST00000475832 CCL24O00175 119 aa9.32□□□□□ -0.92
MRPL55-227ENST00000475832 RPL35P42766 123 aaKnown RBP9.32□□□□□ -0.92
MRPL55-227ENST00000475832 GNG4P50150 75 aa9.32□□□□□ -0.92
MRPL55-227ENST00000475832 SLURP1P55000 103 aa9.32□□□□□ -0.92
MRPL55-227ENST00000475832 RHEBQ15382 184 aa9.32□□□□□ -0.92
MRPL55-227ENST00000475832 GUCA2BQ16661 112 aa9.32□□□□□ -0.92
MRPL55-227ENST00000475832 DEFB136Q30KP8 78 aa9.32□□□□□ -0.92
MRPL55-227ENST00000475832 C18orf65Q6ZTR6 163 aa9.32□□□□□ -0.92
MRPL55-227ENST00000475832 NDUFA11Q86Y39 141 aa9.32□□□□□ -0.92
MRPL55-227ENST00000475832 C3orf56Q8N813 242 aa9.32□□□□□ -0.92
MRPL55-227ENST00000475832 FMC1Q96HJ9 113 aa9.32□□□□□ -0.92
MRPL55-227ENST00000475832 C16orf92Q96LL3 132 aa9.32□□□□□ -0.92
MRPL55-227ENST00000475832 SMAD5-AS1Q9Y6J3 95 aa9.32□□□□□ -0.92
MRPL55-227ENST00000475832 TRRAPQ9Y4A5 3859 aa9.31□□□□□ -0.92
MRPL55-227ENST00000475832 TMEM213A2RRL7 107 aa9.31□□□□□ -0.92
MRPL55-227ENST00000475832 C2orf70A6NJV1 201 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms