RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 SMIM9A6NGZ8 99 aa6.78□□□□□ -1.32
PDPN-204ENST00000475043 ZNF705FA8MVS1 300 aaPredicted RBP6.78□□□□□ -1.32
PDPN-204ENST00000475043 DEDDO75618 318 aa6.78□□□□□ -1.32
PDPN-204ENST00000475043 DUSP14O95147 198 aaKnown RBP6.78□□□□□ -1.32
PDPN-204ENST00000475043 ZNF705DP0CH99 300 aaPredicted RBP6.78□□□□□ -1.32
PDPN-204ENST00000475043 ZNF705BP0CI00 300 aaPredicted RBP6.78□□□□□ -1.32
PDPN-204ENST00000475043 TCTAP57738 103 aa6.78□□□□□ -1.32
PDPN-204ENST00000475043 ASAH1Q13510 395 aa6.78□□□□□ -1.32
PDPN-204ENST00000475043 RAB31Q13636 194 aa6.78□□□□□ -1.32
PDPN-204ENST00000475043 PXDC1Q5TGL8 231 aa6.78□□□□□ -1.32
PDPN-204ENST00000475043 PATE2Q6UY27 113 aa6.78□□□□□ -1.32
PDPN-204ENST00000475043 LINC00305Q7Z4B0 112 aa6.78□□□□□ -1.32
PDPN-204ENST00000475043 RPP25LQ8N5L8 163 aaKnown RBP6.78□□□□□ -1.32
PDPN-204ENST00000475043 NEU1Q99519 415 aa6.78□□□□□ -1.32
PDPN-204ENST00000475043 TMEM208Q9BTX3 173 aa6.78□□□□□ -1.32
PDPN-204ENST00000475043 RNF24Q9Y225 148 aa6.78□□□□□ -1.32
PDPN-204ENST00000475043 HYDINQ4G0P3 5121 aa6.78□□□□□ -1.32
PDPN-204ENST00000475043 DEFB131BA0A096LNP1 70 aa6.77□□□□□ -1.33
PDPN-204ENST00000475043 TRAV8-2A0A0B4J237 113 aa6.77□□□□□ -1.33
PDPN-204ENST00000475043 TMEM189A5PLL7 270 aa6.77□□□□□ -1.33
PDPN-204ENST00000475043 COX7A2P2O60397 106 aa6.77□□□□□ -1.33
PDPN-204ENST00000475043 HBE1P02100 147 aa6.77□□□□□ -1.33
PDPN-204ENST00000475043 SNRPCP09234 159 aaKnown RBP6.77□□□□□ -1.33
PDPN-204ENST00000475043 SPART-AS1P0CW21 52 aa6.77□□□□□ -1.33
PDPN-204ENST00000475043 CAMLGP49069 296 aa6.77□□□□□ -1.33
PDPN-204ENST00000475043 CNN1P51911 297 aaKnown RBP6.77□□□□□ -1.33
PDPN-204ENST00000475043 RAB32Q13637 225 aa6.77□□□□□ -1.33
PDPN-204ENST00000475043 SPINK13Q1W4C9 94 aa6.77□□□□□ -1.33
PDPN-204ENST00000475043 C12orf74Q32Q52 190 aa6.77□□□□□ -1.33
PDPN-204ENST00000475043 Q6ZRG5 221 aa6.77□□□□□ -1.33
PDPN-204ENST00000475043 NRARPQ7Z6K4 114 aa6.77□□□□□ -1.33
PDPN-204ENST00000475043 MGST2Q99735 147 aa6.77□□□□□ -1.33
PDPN-204ENST00000475043 GPN1Q9HCN4 374 aaPredicted RBP6.77□□□□□ -1.33
PDPN-204ENST00000475043 UQCC1Q9NVA1 299 aa6.77□□□□□ -1.33
PDPN-204ENST00000475043 APLNQ9ULZ1 77 aa6.77□□□□□ -1.33
PDPN-204ENST00000475043 RFNGQ9Y644 331 aa6.77□□□□□ -1.33
PDPN-204ENST00000475043 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.77□□□□□ -1.33
PDPN-204ENST00000475043 IGHV4-4A0A075B6R2 117 aa6.76□□□□□ -1.33
PDPN-204ENST00000475043 UBE2L5PA0A1B0GUS4 154 aa6.76□□□□□ -1.33
PDPN-204ENST00000475043 LOC102723971A0A1B0GUV8 181 aa6.76□□□□□ -1.33
PDPN-204ENST00000475043 M0R2Z0 102 aa6.76□□□□□ -1.33
PDPN-204ENST00000475043 UPK1BO75841 260 aa6.76□□□□□ -1.33
PDPN-204ENST00000475043 PRB4P10163 310 aaPredicted RBP6.76□□□□□ -1.33
PDPN-204ENST00000475043 SULT1A1P50225 295 aa6.76□□□□□ -1.33
PDPN-204ENST00000475043 RHOBP62745 196 aa6.76□□□□□ -1.33
PDPN-204ENST00000475043 HIST1H1AQ02539 215 aaPredicted RBP6.76□□□□□ -1.33
PDPN-204ENST00000475043 RRN3P1Q2M238 152 aa6.76□□□□□ -1.33
PDPN-204ENST00000475043 C10orf113Q5VZT2 155 aa6.76□□□□□ -1.33
PDPN-204ENST00000475043 AMTNQ6UX39 209 aa6.76□□□□□ -1.33
PDPN-204ENST00000475043 STX12Q86Y82 276 aa6.76□□□□□ -1.33
PDPN-204ENST00000475043 BPIFA4PQ86YQ2 179 aa6.76□□□□□ -1.33
PDPN-204ENST00000475043 C1orf158Q8N1D5 194 aa6.76□□□□□ -1.33
PDPN-204ENST00000475043 OR11H7Q8NGC8 314 aa6.76□□□□□ -1.33
PDPN-204ENST00000475043 LYRM2Q9NU23 88 aaPredicted RBP6.76□□□□□ -1.33
PDPN-204ENST00000475043 PPP1R14DQ9NXH3 145 aa6.76□□□□□ -1.33
PDPN-204ENST00000475043 DNAH1Q9P2D7 4330 aa6.76□□□□□ -1.33
PDPN-204ENST00000475043 A0A087X0K7 114 aa6.75□□□□□ -1.33
PDPN-204ENST00000475043 IGSF23A1L1A6 192 aa6.75□□□□□ -1.33
PDPN-204ENST00000475043 A8MTW9 85 aa6.75□□□□□ -1.33
PDPN-204ENST00000475043 INSP01308 110 aa6.75□□□□□ -1.33
PDPN-204ENST00000475043 AMBPP02760 352 aa6.75□□□□□ -1.33
PDPN-204ENST00000475043 CXCL3P19876 107 aa6.75□□□□□ -1.33
PDPN-204ENST00000475043 S100A11P31949 105 aa6.75□□□□□ -1.33
PDPN-204ENST00000475043 HBG1P69891 147 aa6.75□□□□□ -1.33
PDPN-204ENST00000475043 HBG2P69892 147 aa6.75□□□□□ -1.33
PDPN-204ENST00000475043 BAXQ07812 192 aa6.75□□□□□ -1.33
PDPN-204ENST00000475043 PSG3Q16557 428 aa6.75□□□□□ -1.33
PDPN-204ENST00000475043 FAM222AQ5U5X8 452 aa6.75□□□□□ -1.33
PDPN-204ENST00000475043 MORN5Q5VZ52 161 aa6.75□□□□□ -1.33
PDPN-204ENST00000475043 MIC13Q5XKP0 118 aa6.75□□□□□ -1.33
PDPN-204ENST00000475043 LCN15Q6UWW0 184 aa6.75□□□□□ -1.33
PDPN-204ENST00000475043 TMEM252Q8N6L7 170 aa6.75□□□□□ -1.33
PDPN-204ENST00000475043 OR1L4Q8NGR5 311 aa6.75□□□□□ -1.33
PDPN-204ENST00000475043 TMEM37Q8WXS4 190 aa6.75□□□□□ -1.33
PDPN-204ENST00000475043 IGF2BP2-AS1Q96M15 143 aa6.75□□□□□ -1.33
PDPN-204ENST00000475043 C11orf1Q9H5F2 150 aa6.75□□□□□ -1.33
PDPN-204ENST00000475043 DNAJC4Q9NNZ3 241 aa6.75□□□□□ -1.33
PDPN-204ENST00000475043 PTTG2Q9NZH5 202 aa6.75□□□□□ -1.33
PDPN-204ENST00000475043 WDR83OSQ9Y284 106 aa6.75□□□□□ -1.33
PDPN-204ENST00000475043 YTHDF2Q9Y5A9 579 aaKnown RBP6.75□□□□□ -1.33
PDPN-204ENST00000475043 TRAV12-2A0A075B6T6 113 aa6.74□□□□□ -1.33
PDPN-204ENST00000475043 TEX48A0A1B0GUV7 120 aa6.74□□□□□ -1.33
PDPN-204ENST00000475043 H3BTX0 84 aa6.74□□□□□ -1.33
PDPN-204ENST00000475043 BOLA2-SMG1P6H3BVE0 249 aa6.74□□□□□ -1.33
PDPN-204ENST00000475043 MRPS12O15235 138 aaKnown RBP6.74□□□□□ -1.33
PDPN-204ENST00000475043 SIX6O95475 246 aa6.74□□□□□ -1.33
PDPN-204ENST00000475043 RLN2P04090 185 aa6.74□□□□□ -1.33
PDPN-204ENST00000475043 HTN3P15516 51 aa6.74□□□□□ -1.33
PDPN-204ENST00000475043 FGF7P21781 194 aa6.74□□□□□ -1.33
PDPN-204ENST00000475043 IFITM3Q01628 133 aa6.74□□□□□ -1.33
PDPN-204ENST00000475043 IL15RAQ13261 267 aa6.74□□□□□ -1.33
PDPN-204ENST00000475043 OPCMLQ14982 345 aa6.74□□□□□ -1.33
PDPN-204ENST00000475043 LRRC37A5PQ49AS3 106 aa6.74□□□□□ -1.33
PDPN-204ENST00000475043 BAP18Q8IXM2 172 aa6.74□□□□□ -1.33
PDPN-204ENST00000475043 OR8A1Q8NGG7 326 aa6.74□□□□□ -1.33
PDPN-204ENST00000475043 RPUSD4Q96CM3 377 aaKnown RBP6.74□□□□□ -1.33
PDPN-204ENST00000475043 PFDN5Q99471 154 aa6.74□□□□□ -1.33
PDPN-204ENST00000475043 SLC50A1Q9BRV3 221 aa6.74□□□□□ -1.33
PDPN-204ENST00000475043 NIPSNAP3BQ9BS92 247 aa6.74□□□□□ -1.33
PDPN-204ENST00000475043 NDUFAF3Q9BU61 184 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms