RNA–Protein interactions for RNA: ENST00000474807.5

DNMT3A-210, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-210ENST00000474807 TMEM208Q9BTX3 173 aa13.07□□□□□ -0.32
DNMT3A-210ENST00000474807 C11orf1Q9H5F2 150 aa13.07□□□□□ -0.32
DNMT3A-210ENST00000474807 NUDT15Q9NV35 164 aa13.07□□□□□ -0.32
DNMT3A-210ENST00000474807 RNF24Q9Y225 148 aa13.07□□□□□ -0.32
DNMT3A-210ENST00000474807 KIAA1109Q2LD37 5005 aa13.07□□□□□ -0.32
DNMT3A-210ENST00000474807 L7N2F9 121 aa13.06□□□□□ -0.32
DNMT3A-210ENST00000474807 INSP01308 110 aa13.06□□□□□ -0.32
DNMT3A-210ENST00000474807 VAMP2P63027 116 aa13.06□□□□□ -0.32
DNMT3A-210ENST00000474807 PSG3Q16557 428 aa13.06□□□□□ -0.32
DNMT3A-210ENST00000474807 POM121L12Q8N7R1 296 aa13.06□□□□□ -0.32
DNMT3A-210ENST00000474807 OR8A1Q8NGG7 326 aa13.06□□□□□ -0.32
DNMT3A-210ENST00000474807 TMEM37Q8WXS4 190 aa13.06□□□□□ -0.32
DNMT3A-210ENST00000474807 CCDC32Q9BV29 185 aa13.06□□□□□ -0.32
DNMT3A-210ENST00000474807 LSM5Q9Y4Y9 91 aaKnown RBP13.06□□□□□ -0.32
DNMT3A-210ENST00000474807 DNAH11Q96DT5 4516 aa13.05□□□□□ -0.32
DNMT3A-210ENST00000474807 PKD1P98161 4303 aa13.05□□□□□ -0.32
DNMT3A-210ENST00000474807 FAM25EA8MYX2 175 aa13.05□□□□□ -0.32
DNMT3A-210ENST00000474807 BOLA2-SMG1P6H3BVE0 249 aa13.05□□□□□ -0.32
DNMT3A-210ENST00000474807 PRM2P04554 102 aa13.05□□□□□ -0.32
DNMT3A-210ENST00000474807 CXCL2P19875 107 aa13.05□□□□□ -0.32
DNMT3A-210ENST00000474807 BAP18Q8IXM2 172 aa13.05□□□□□ -0.32
DNMT3A-210ENST00000474807 C12orf45Q8N5I9 185 aaPredicted RBP13.05□□□□□ -0.32
DNMT3A-210ENST00000474807 LRRC20Q8TCA0 184 aa13.05□□□□□ -0.32
DNMT3A-210ENST00000474807 TRAV12-2A0A075B6T6 113 aa13.04□□□□□ -0.32
DNMT3A-210ENST00000474807 C5orf51A6NDU8 294 aa13.04□□□□□ -0.32
DNMT3A-210ENST00000474807 ZNF705GA8MUZ8 300 aaPredicted RBP13.04□□□□□ -0.32
DNMT3A-210ENST00000474807 B2MP61769 119 aa13.04□□□□□ -0.32
DNMT3A-210ENST00000474807 HIST1H1AQ02539 215 aaPredicted RBP13.04□□□□□ -0.32
DNMT3A-210ENST00000474807 C2orf50Q96LR7 162 aa13.04□□□□□ -0.32
DNMT3A-210ENST00000474807 ZNF331Q9NQX6 463 aaPredicted RBP13.04□□□□□ -0.32
DNMT3A-210ENST00000474807 PKHD1P08F94 4074 aa13.04□□□□□ -0.32
DNMT3A-210ENST00000474807 FAM24AA6NFZ4 105 aa13.03□□□□□ -0.32
DNMT3A-210ENST00000474807 COX7A2P2O60397 106 aa13.03□□□□□ -0.32
DNMT3A-210ENST00000474807 CST7O76096 145 aa13.03□□□□□ -0.32
DNMT3A-210ENST00000474807 H2AFB2P0C5Z0 115 aa13.03□□□□□ -0.32
DNMT3A-210ENST00000474807 BCAP31P51572 246 aa13.03□□□□□ -0.32
DNMT3A-210ENST00000474807 CAV2P51636 162 aa13.03□□□□□ -0.32
DNMT3A-210ENST00000474807 IL15RAQ13261 267 aa13.03□□□□□ -0.32
DNMT3A-210ENST00000474807 MORN5Q5VZ52 161 aa13.03□□□□□ -0.32
DNMT3A-210ENST00000474807 LCN15Q6UWW0 184 aa13.03□□□□□ -0.32
DNMT3A-210ENST00000474807 LINC00299Q6ZSB3 139 aa13.03□□□□□ -0.32
DNMT3A-210ENST00000474807 BPIFA4PQ86YQ2 179 aa13.03□□□□□ -0.32
DNMT3A-210ENST00000474807 RPUSD4Q96CM3 377 aaKnown RBP13.03□□□□□ -0.32
DNMT3A-210ENST00000474807 SNRPCP09234 159 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-210ENST00000474807 PRB4P10163 310 aaPredicted RBP13.02□□□□□ -0.33
DNMT3A-210ENST00000474807 HTN3P15516 51 aa13.02□□□□□ -0.33
DNMT3A-210ENST00000474807 TSPOP30536 169 aa13.02□□□□□ -0.33
DNMT3A-210ENST00000474807 CAMLGP49069 296 aa13.02□□□□□ -0.33
DNMT3A-210ENST00000474807 DAD1P61803 113 aa13.02□□□□□ -0.33
DNMT3A-210ENST00000474807 RHOBP62745 196 aa13.02□□□□□ -0.33
DNMT3A-210ENST00000474807 OPCMLQ14982 345 aa13.02□□□□□ -0.33
DNMT3A-210ENST00000474807 VWC2Q2TAL6 325 aa13.02□□□□□ -0.33
DNMT3A-210ENST00000474807 NRARPQ7Z6K4 114 aa13.02□□□□□ -0.33
DNMT3A-210ENST00000474807 SLC50A1Q9BRV3 221 aa13.02□□□□□ -0.33
DNMT3A-210ENST00000474807 WDR83OSQ9Y284 106 aa13.02□□□□□ -0.33
DNMT3A-210ENST00000474807 FAM240BA0A1B0GVZ2 78 aa13.01□□□□□ -0.33
DNMT3A-210ENST00000474807 PLAC8L1A1L4L8 177 aa13.01□□□□□ -0.33
DNMT3A-210ENST00000474807 LYRM9A8MSI8 78 aa13.01□□□□□ -0.33
DNMT3A-210ENST00000474807 AZU1P20160 251 aa13.01□□□□□ -0.33
DNMT3A-210ENST00000474807 C10orf113Q5VZT2 155 aa13.01□□□□□ -0.33
DNMT3A-210ENST00000474807 LYRM2Q9NU23 88 aaPredicted RBP13.01□□□□□ -0.33
DNMT3A-210ENST00000474807 SLC17A3O00476 420 aa13□□□□□ -0.33
DNMT3A-210ENST00000474807 IGLC2P0DOY2 106 aa13□□□□□ -0.33
DNMT3A-210ENST00000474807 PVALBP20472 110 aaPredicted RBP13□□□□□ -0.33
DNMT3A-210ENST00000474807 RAB31Q13636 194 aa13□□□□□ -0.33
DNMT3A-210ENST00000474807 MIC13Q5XKP0 118 aa13□□□□□ -0.33
DNMT3A-210ENST00000474807 Q6ZRG5 221 aa13□□□□□ -0.33
DNMT3A-210ENST00000474807 DNAJC4Q9NNZ3 241 aa13□□□□□ -0.33
DNMT3A-210ENST00000474807 UQCC1Q9NVA1 299 aa13□□□□□ -0.33
DNMT3A-210ENST00000474807 PPP1R14DQ9NXH3 145 aa13□□□□□ -0.33
DNMT3A-210ENST00000474807 H3BQ15 152 aa12.99□□□□□ -0.33
DNMT3A-210ENST00000474807 CDKN1BP46527 198 aa12.99□□□□□ -0.33
DNMT3A-210ENST00000474807 SULT1A1P50225 295 aa12.99□□□□□ -0.33
DNMT3A-210ENST00000474807 RAB32Q13637 225 aa12.99□□□□□ -0.33
DNMT3A-210ENST00000474807 TMEM88Q6PEY1 159 aa12.99□□□□□ -0.33
DNMT3A-210ENST00000474807 LINC00336Q6ZUF6 198 aa12.99□□□□□ -0.33
DNMT3A-210ENST00000474807 TMEM256Q8N2U0 113 aa12.99□□□□□ -0.33
DNMT3A-210ENST00000474807 TMEM252Q8N6L7 170 aa12.99□□□□□ -0.33
DNMT3A-210ENST00000474807 SAT2Q96F10 170 aaPredicted RBP12.99□□□□□ -0.33
DNMT3A-210ENST00000474807 LINC01587Q99440 93 aa12.99□□□□□ -0.33
DNMT3A-210ENST00000474807 TRAV5A0A0B4J249 113 aa12.98□□□□□ -0.33
DNMT3A-210ENST00000474807 IGSF23A1L1A6 192 aa12.98□□□□□ -0.33
DNMT3A-210ENST00000474807 PRAC2D3DTV9 90 aa12.98□□□□□ -0.33
DNMT3A-210ENST00000474807 H3BTX0 84 aa12.98□□□□□ -0.33
DNMT3A-210ENST00000474807 S100A11P31949 105 aa12.98□□□□□ -0.33
DNMT3A-210ENST00000474807 RPL29P47914 159 aaKnown RBP12.98□□□□□ -0.33
DNMT3A-210ENST00000474807 TAS2R60P59551 318 aa12.98□□□□□ -0.33
DNMT3A-210ENST00000474807 S100A10P60903 97 aa12.98□□□□□ -0.33
DNMT3A-210ENST00000474807 ASAH1Q13510 395 aa12.98□□□□□ -0.33
DNMT3A-210ENST00000474807 FCN2Q15485 313 aa12.97□□□□□ -0.33
DNMT3A-210ENST00000474807 LGALS9BQ3B8N2 356 aa12.97□□□□□ -0.33
DNMT3A-210ENST00000474807 RNF212Q495C1 297 aa12.97□□□□□ -0.33
DNMT3A-210ENST00000474807 MZT2BQ6NZ67 158 aa12.97□□□□□ -0.33
DNMT3A-210ENST00000474807 OR1L4Q8NGR5 311 aa12.97□□□□□ -0.33
DNMT3A-210ENST00000474807 CHAC2Q8WUX2 184 aa12.97□□□□□ -0.33
DNMT3A-210ENST00000474807 S100ZQ8WXG8 99 aa12.97□□□□□ -0.33
DNMT3A-210ENST00000474807 PFDN5Q99471 154 aa12.97□□□□□ -0.33
DNMT3A-210ENST00000474807 PXMP4Q9Y6I8 212 aa12.97□□□□□ -0.33
DNMT3A-210ENST00000474807 UBE2L5PA0A1B0GUS4 154 aa12.96□□□□□ -0.33
DNMT3A-210ENST00000474807 M0R2N4 97 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms