RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 ZNF674Q2M3X9 581 aa9.82□□□□□ -0.84
VPS13D-205ENST00000473099 KHDC1LQ5JSQ8 128 aa9.82□□□□□ -0.84
VPS13D-205ENST00000473099 UNQ9165/PRO28630Q6UXU0 137 aa9.82□□□□□ -0.84
VPS13D-205ENST00000473099 C1QL4Q86Z23 238 aa9.82□□□□□ -0.84
VPS13D-205ENST00000473099 CMTM2Q8TAZ6 248 aa9.82□□□□□ -0.84
VPS13D-205ENST00000473099 DPF1Q92782 380 aa9.82□□□□□ -0.84
VPS13D-205ENST00000473099 SLC50A1Q9BRV3 221 aa9.82□□□□□ -0.84
VPS13D-205ENST00000473099 EPDR1Q9UM22 224 aa9.82□□□□□ -0.84
VPS13D-205ENST00000473099 PRELID1Q9Y255 219 aa9.82□□□□□ -0.84
VPS13D-205ENST00000473099 RNF114Q9Y508 228 aa9.82□□□□□ -0.84
VPS13D-205ENST00000473099 TSSC4Q9Y5U2 329 aaPredicted RBP9.82□□□□□ -0.84
VPS13D-205ENST00000473099 LY96Q9Y6Y9 160 aa9.82□□□□□ -0.84
VPS13D-205ENST00000473099 SERTM2A0A1B0GWG4 89 aa9.81□□□□□ -0.84
VPS13D-205ENST00000473099 HELTA6NFD8 242 aa9.81□□□□□ -0.84
VPS13D-205ENST00000473099 ZNF785A8K8V0 405 aa9.81□□□□□ -0.84
VPS13D-205ENST00000473099 C9JCJ5 164 aa9.81□□□□□ -0.84
VPS13D-205ENST00000473099 LINC01619G3V211 115 aa9.81□□□□□ -0.84
VPS13D-205ENST00000473099 M0R036 132 aa9.81□□□□□ -0.84
VPS13D-205ENST00000473099 PEX7O00628 323 aa9.81□□□□□ -0.84
VPS13D-205ENST00000473099 AKR1C3P42330 323 aa9.81□□□□□ -0.84
VPS13D-205ENST00000473099 TAS2R60P59551 318 aa9.81□□□□□ -0.84
VPS13D-205ENST00000473099 SAMD13Q5VXD3 122 aa9.81□□□□□ -0.84
VPS13D-205ENST00000473099 SIGLEC15Q6ZMC9 328 aa9.81□□□□□ -0.84
VPS13D-205ENST00000473099 C2CD4CQ8TF44 421 aa9.81□□□□□ -0.84
VPS13D-205ENST00000473099 GLMPQ8WWB7 406 aa9.81□□□□□ -0.84
VPS13D-205ENST00000473099 ATG101Q9BSB4 218 aa9.81□□□□□ -0.84
VPS13D-205ENST00000473099 SDF2L1Q9HCN8 221 aa9.81□□□□□ -0.84
VPS13D-205ENST00000473099 IGHV4OR15-8A0A075B7B6 117 aa9.8□□□□□ -0.84
VPS13D-205ENST00000473099 A0A087WW49 117 aa9.8□□□□□ -0.84
VPS13D-205ENST00000473099 K7EQM0 130 aa9.8□□□□□ -0.84
VPS13D-205ENST00000473099 ZNF207O43670 478 aaKnown RBP9.8□□□□□ -0.84
VPS13D-205ENST00000473099 HOXD3P31249 432 aaPredicted RBP9.8□□□□□ -0.84
VPS13D-205ENST00000473099 CSN1S1P47710 185 aa9.8□□□□□ -0.84
VPS13D-205ENST00000473099 AWAT1Q58HT5 328 aa9.8□□□□□ -0.84
VPS13D-205ENST00000473099 TCTEX1D4Q5JR98 221 aa9.8□□□□□ -0.84
VPS13D-205ENST00000473099 KLHL30-AS1Q8NEE0 82 aa9.8□□□□□ -0.84
VPS13D-205ENST00000473099 SMPXQ9UHP9 88 aa9.8□□□□□ -0.84
VPS13D-205ENST00000473099 FBLL1A6NHQ2 334 aaKnown RBP9.79□□□□□ -0.84
VPS13D-205ENST00000473099 RPL35P42766 123 aaKnown RBP9.79□□□□□ -0.84
VPS13D-205ENST00000473099 PROK1P58294 105 aa9.79□□□□□ -0.84
VPS13D-205ENST00000473099 OR1N2Q8NGR9 330 aa9.79□□□□□ -0.84
VPS13D-205ENST00000473099 SMIM12Q96EX1 92 aa9.79□□□□□ -0.84
VPS13D-205ENST00000473099 PEMTQ9UBM1 199 aa9.79□□□□□ -0.84
VPS13D-205ENST00000473099 SMAD5-AS1Q9Y6J3 95 aa9.79□□□□□ -0.84
VPS13D-205ENST00000473099 WNK1Q9H4A3 2382 aa9.79□□□□□ -0.84
VPS13D-205ENST00000473099 A0A087WWC5 75 aa9.78□□□□□ -0.84
VPS13D-205ENST00000473099 M0QZ24 198 aa9.78□□□□□ -0.84
VPS13D-205ENST00000473099 APOHP02749 345 aaPredicted RBP9.78□□□□□ -0.84
VPS13D-205ENST00000473099 TCRAP04437 139 aa9.78□□□□□ -0.84
VPS13D-205ENST00000473099 GNG4P50150 75 aa9.78□□□□□ -0.84
VPS13D-205ENST00000473099 UBE2G1P62253 170 aa9.78□□□□□ -0.84
VPS13D-205ENST00000473099 KLF5Q13887 457 aaPredicted RBP9.78□□□□□ -0.84
VPS13D-205ENST00000473099 OR11H1Q8NG94 326 aa9.78□□□□□ -0.84
VPS13D-205ENST00000473099 MRPL53Q96EL3 112 aaKnown RBP9.78□□□□□ -0.84
VPS13D-205ENST00000473099 FMC1Q96HJ9 113 aa9.78□□□□□ -0.84
VPS13D-205ENST00000473099 C17orf77Q96MU5 243 aa9.78□□□□□ -0.84
VPS13D-205ENST00000473099 DERL1Q9BUN8 251 aa9.78□□□□□ -0.84
VPS13D-205ENST00000473099 RHPN1-AS1Q9BWJ2 59 aa9.78□□□□□ -0.84
VPS13D-205ENST00000473099 ZNF331Q9NQX6 463 aaPredicted RBP9.78□□□□□ -0.84
VPS13D-205ENST00000473099 KLF12Q9Y4X4 402 aa9.78□□□□□ -0.84
VPS13D-205ENST00000473099 JMJD1CQ15652 2540 aa9.77□□□□□ -0.85
VPS13D-205ENST00000473099 IGHV3-49A0A0A0MS15 119 aa9.77□□□□□ -0.85
VPS13D-205ENST00000473099 TRBV6-1A0A0K0K1D8 114 aa9.77□□□□□ -0.85
VPS13D-205ENST00000473099 TMEM213A2RRL7 107 aa9.77□□□□□ -0.85
VPS13D-205ENST00000473099 C7orf77A4D0Y5 90 aa9.77□□□□□ -0.85
VPS13D-205ENST00000473099 H3BTX0 84 aa9.77□□□□□ -0.85
VPS13D-205ENST00000473099 SLC17A3O00476 420 aa9.77□□□□□ -0.85
VPS13D-205ENST00000473099 CHEK1O14757 476 aa9.77□□□□□ -0.85
VPS13D-205ENST00000473099 SNRPCP09234 159 aaKnown RBP9.77□□□□□ -0.85
VPS13D-205ENST00000473099 CD28P10747 220 aa9.77□□□□□ -0.85
VPS13D-205ENST00000473099 SYNJ2BPP57105 145 aa9.77□□□□□ -0.85
VPS13D-205ENST00000473099 RPL23P62829 140 aaKnown RBP9.77□□□□□ -0.85
VPS13D-205ENST00000473099 ADIRFQ15847 76 aa9.77□□□□□ -0.85
VPS13D-205ENST00000473099 TMEM183BQ1AE95 376 aa9.77□□□□□ -0.85
VPS13D-205ENST00000473099 TM4SF20Q53R12 229 aa9.77□□□□□ -0.85
VPS13D-205ENST00000473099 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.77□□□□□ -0.85
VPS13D-205ENST00000473099 EXOC3-AS1Q8N2X6 119 aa9.77□□□□□ -0.85
VPS13D-205ENST00000473099 CTDSP1Q9GZU7 261 aa9.77□□□□□ -0.85
VPS13D-205ENST00000473099 RPS10P5Q9NQ39 176 aa9.77□□□□□ -0.85
VPS13D-205ENST00000473099 IGHV3OR16-13A0A075B7E8 117 aa9.76□□□□□ -0.85
VPS13D-205ENST00000473099 IGHV3-74A0A0B4J1X5 117 aa9.76□□□□□ -0.85
VPS13D-205ENST00000473099 IGHV3-66A0A0C4DH42 116 aa9.76□□□□□ -0.85
VPS13D-205ENST00000473099 MT-ND4LP03901 98 aa9.76□□□□□ -0.85
VPS13D-205ENST00000473099 FOXL1Q12952 345 aa9.76□□□□□ -0.85
VPS13D-205ENST00000473099 CENPWQ5EE01 88 aa9.76□□□□□ -0.85
VPS13D-205ENST00000473099 ATRAIDQ6UW56 229 aa9.76□□□□□ -0.85
VPS13D-205ENST00000473099 LINC01551Q86U37 167 aa9.76□□□□□ -0.85
VPS13D-205ENST00000473099 TMEM75Q8N9X5 138 aa9.76□□□□□ -0.85
VPS13D-205ENST00000473099 ANAPC16Q96DE5 110 aa9.76□□□□□ -0.85
VPS13D-205ENST00000473099 NRN1Q9NPD7 142 aa9.76□□□□□ -0.85
VPS13D-205ENST00000473099 BIN3Q9NQY0 253 aa9.76□□□□□ -0.85
VPS13D-205ENST00000473099 TMEM242Q9NWH2 141 aa9.76□□□□□ -0.85
VPS13D-205ENST00000473099 C2orf70A6NJV1 201 aa9.75□□□□□ -0.85
VPS13D-205ENST00000473099 DIRC3C9JPN6 131 aa9.75□□□□□ -0.85
VPS13D-205ENST00000473099 TSPAN4O14817 238 aa9.75□□□□□ -0.85
VPS13D-205ENST00000473099 PPP1R2P9O14990 202 aa9.75□□□□□ -0.85
VPS13D-205ENST00000473099 GNG5P63218 68 aa9.75□□□□□ -0.85
VPS13D-205ENST00000473099 FHL3Q13643 280 aa9.75□□□□□ -0.85
VPS13D-205ENST00000473099 C8orf86Q6ZUL3 223 aa9.75□□□□□ -0.85
VPS13D-205ENST00000473099 PRIMA1Q86XR5 153 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms