RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 SMIM8Q96KF7 97 aa13.99□□□□□ -0.17
COL9A3-210ENST00000472880 UHRF2Q96PU4 802 aa13.99□□□□□ -0.17
COL9A3-210ENST00000472880 GSKIPQ9P0R6 139 aa13.99□□□□□ -0.17
COL9A3-210ENST00000472880 MGAT4CQ9UBM8 478 aa13.99□□□□□ -0.17
COL9A3-210ENST00000472880 PMS2P5A8MQ11 134 aa13.98□□□□□ -0.17
COL9A3-210ENST00000472880 CCNKO75909 580 aa13.98□□□□□ -0.17
COL9A3-210ENST00000472880 METTL15P1P0C7V9 234 aa13.98□□□□□ -0.17
COL9A3-210ENST00000472880 HIST1H1AQ02539 215 aaPredicted RBP13.98□□□□□ -0.17
COL9A3-210ENST00000472880 SOHLH1Q5JUK2 328 aa13.98□□□□□ -0.17
COL9A3-210ENST00000472880 C12orf45Q8N5I9 185 aaPredicted RBP13.98□□□□□ -0.17
COL9A3-210ENST00000472880 C15orf53Q8NAA6 179 aa13.98□□□□□ -0.17
COL9A3-210ENST00000472880 ENKURQ8TC29 256 aa13.98□□□□□ -0.17
COL9A3-210ENST00000472880 LRRC20Q8TCA0 184 aa13.98□□□□□ -0.17
COL9A3-210ENST00000472880 PPP1R14DQ9NXH3 145 aa13.98□□□□□ -0.17
COL9A3-210ENST00000472880 TRAV12-2A0A075B6T6 113 aa13.97□□□□□ -0.17
COL9A3-210ENST00000472880 A0A087X0K7 114 aa13.97□□□□□ -0.17
COL9A3-210ENST00000472880 TSPOP30536 169 aa13.97□□□□□ -0.17
COL9A3-210ENST00000472880 RHOBP62745 196 aa13.97□□□□□ -0.17
COL9A3-210ENST00000472880 Q6ZR54 194 aa13.97□□□□□ -0.17
COL9A3-210ENST00000472880 OR10P1Q8NGE3 313 aa13.97□□□□□ -0.17
COL9A3-210ENST00000472880 ARL6Q9H0F7 186 aa13.97□□□□□ -0.17
COL9A3-210ENST00000472880 NPVFQ9HCQ7 196 aa13.97□□□□□ -0.17
COL9A3-210ENST00000472880 RNF24Q9Y225 148 aa13.97□□□□□ -0.17
COL9A3-210ENST00000472880 RCL1Q9Y2P8 373 aaKnown RBP13.97□□□□□ -0.17
COL9A3-210ENST00000472880 FNDC10F2Z333 226 aa13.96□□□□□ -0.17
COL9A3-210ENST00000472880 PRM2P04554 102 aa13.96□□□□□ -0.17
COL9A3-210ENST00000472880 DEFB130BP0DP73 79 aa13.96□□□□□ -0.17
COL9A3-210ENST00000472880 DEFB130AP0DP74 79 aa13.96□□□□□ -0.17
COL9A3-210ENST00000472880 CXCL3P19876 107 aa13.96□□□□□ -0.17
COL9A3-210ENST00000472880 TEPPQ6URK8 271 aa13.96□□□□□ -0.17
COL9A3-210ENST00000472880 TMEM14EPQ6UXP3 125 aa13.96□□□□□ -0.17
COL9A3-210ENST00000472880 OR8A1Q8NGG7 326 aa13.96□□□□□ -0.17
COL9A3-210ENST00000472880 DNAH17Q9UFH2 4485 aa13.95□□□□□ -0.18
COL9A3-210ENST00000472880 PCLOQ9Y6V0 5065 aa13.95□□□□□ -0.18
COL9A3-210ENST00000472880 FAM25EA8MYX2 175 aa13.95□□□□□ -0.18
COL9A3-210ENST00000472880 MBPP02686 304 aaPredicted RBP13.95□□□□□ -0.18
COL9A3-210ENST00000472880 MED14OSP0DP75 135 aa13.95□□□□□ -0.18
COL9A3-210ENST00000472880 TAS2R30P59541 319 aa13.95□□□□□ -0.18
COL9A3-210ENST00000472880 SLC38A11Q08AI6 406 aa13.95□□□□□ -0.18
COL9A3-210ENST00000472880 PSG3Q16557 428 aa13.95□□□□□ -0.18
COL9A3-210ENST00000472880 TMEM256Q8N2U0 113 aa13.95□□□□□ -0.18
COL9A3-210ENST00000472880 ARV1Q9H2C2 271 aa13.95□□□□□ -0.18
COL9A3-210ENST00000472880 C5orf51A6NDU8 294 aa13.94□□□□□ -0.18
COL9A3-210ENST00000472880 K7EPK0 472 aa13.94□□□□□ -0.18
COL9A3-210ENST00000472880 TSC22D2O75157 780 aa13.94□□□□□ -0.18
COL9A3-210ENST00000472880 PXDC1Q5TGL8 231 aa13.94□□□□□ -0.18
COL9A3-210ENST00000472880 NRARPQ7Z6K4 114 aa13.94□□□□□ -0.18
COL9A3-210ENST00000472880 ZNF546Q86UE3 836 aa13.94□□□□□ -0.18
COL9A3-210ENST00000472880 LINC01587Q99440 93 aa13.94□□□□□ -0.18
COL9A3-210ENST00000472880 ATG101Q9BSB4 218 aa13.94□□□□□ -0.18
COL9A3-210ENST00000472880 PKHD1P08F94 4074 aa13.94□□□□□ -0.18
COL9A3-210ENST00000472880 GOSR2O14653 212 aa13.93□□□□□ -0.18
COL9A3-210ENST00000472880 CXCL2P19875 107 aa13.93□□□□□ -0.18
COL9A3-210ENST00000472880 FAM3BP58499 235 aaPredicted RBP13.93□□□□□ -0.18
COL9A3-210ENST00000472880 C1orf134Q5TEV5 83 aa13.93□□□□□ -0.18
COL9A3-210ENST00000472880 PATE2Q6UY27 113 aa13.93□□□□□ -0.18
COL9A3-210ENST00000472880 C7orf66A4D0T2 115 aa13.92□□□□□ -0.18
COL9A3-210ENST00000472880 F5H768 121 aa13.92□□□□□ -0.18
COL9A3-210ENST00000472880 HTN1P15515 57 aa13.92□□□□□ -0.18
COL9A3-210ENST00000472880 AZU1P20160 251 aa13.92□□□□□ -0.18
COL9A3-210ENST00000472880 TAS2R60P59551 318 aa13.92□□□□□ -0.18
COL9A3-210ENST00000472880 LCN15Q6UWW0 184 aa13.92□□□□□ -0.18
COL9A3-210ENST00000472880 RPUSD4Q96CM3 377 aaKnown RBP13.92□□□□□ -0.18
COL9A3-210ENST00000472880 C16orf74Q96GX8 76 aa13.92□□□□□ -0.18
COL9A3-210ENST00000472880 C2orf50Q96LR7 162 aa13.92□□□□□ -0.18
COL9A3-210ENST00000472880 NACAE9PAV3 2078 aa13.92□□□□□ -0.18
COL9A3-210ENST00000472880 PLAC8L1A1L4L8 177 aa13.91□□□□□ -0.18
COL9A3-210ENST00000472880 ATP5G1P05496 136 aa13.91□□□□□ -0.18
COL9A3-210ENST00000472880 PRB4P10163 310 aaPredicted RBP13.91□□□□□ -0.18
COL9A3-210ENST00000472880 ATP5G3P48201 142 aa13.91□□□□□ -0.18
COL9A3-210ENST00000472880 FCN2Q15485 313 aa13.91□□□□□ -0.18
COL9A3-210ENST00000472880 LINC00305Q7Z4B0 112 aa13.91□□□□□ -0.18
COL9A3-210ENST00000472880 SLC50A1Q9BRV3 221 aa13.91□□□□□ -0.18
COL9A3-210ENST00000472880 GPN1Q9HCN4 374 aaPredicted RBP13.91□□□□□ -0.18
COL9A3-210ENST00000472880 LSM5Q9Y4Y9 91 aaKnown RBP13.91□□□□□ -0.18
COL9A3-210ENST00000472880 L7N2F9 121 aa13.9□□□□□ -0.18
COL9A3-210ENST00000472880 AGPAT2O15120 278 aa13.9□□□□□ -0.18
COL9A3-210ENST00000472880 MRPS12O15235 138 aaKnown RBP13.9□□□□□ -0.18
COL9A3-210ENST00000472880 COX7A2P2O60397 106 aa13.9□□□□□ -0.18
COL9A3-210ENST00000472880 CDKN1BP46527 198 aa13.9□□□□□ -0.18
COL9A3-210ENST00000472880 DEFA1P59665 94 aa13.9□□□□□ -0.18
COL9A3-210ENST00000472880 DEFA3P59666 94 aa13.9□□□□□ -0.18
COL9A3-210ENST00000472880 VAMP2P63027 116 aa13.9□□□□□ -0.18
COL9A3-210ENST00000472880 GGACTQ9BVM4 153 aa13.9□□□□□ -0.18
COL9A3-210ENST00000472880 INMT-MINDY4F8WBC2 141 aa13.89□□□□□ -0.19
COL9A3-210ENST00000472880 PRAF2O60831 178 aa13.89□□□□□ -0.19
COL9A3-210ENST00000472880 NUDT3O95989 172 aa13.89□□□□□ -0.19
COL9A3-210ENST00000472880 IL15RAQ13261 267 aa13.89□□□□□ -0.19
COL9A3-210ENST00000472880 BPIFA4PQ86YQ2 179 aa13.89□□□□□ -0.19
COL9A3-210ENST00000472880 C11orf1Q9H5F2 150 aa13.89□□□□□ -0.19
COL9A3-210ENST00000472880 ZNF331Q9NQX6 463 aaPredicted RBP13.89□□□□□ -0.19
COL9A3-210ENST00000472880 TIMM8BQ9Y5J9 83 aaPredicted RBP13.89□□□□□ -0.19
COL9A3-210ENST00000472880 CBY3A6NI87 242 aa13.88□□□□□ -0.19
COL9A3-210ENST00000472880 ARL16Q0P5N6 197 aa13.88□□□□□ -0.19
COL9A3-210ENST00000472880 TMEM263Q8WUH6 116 aaKnown RBP13.88□□□□□ -0.19
COL9A3-210ENST00000472880 MARVELD1Q9BSK0 173 aa13.88□□□□□ -0.19
COL9A3-210ENST00000472880 DYNC1H1Q14204 4646 aaKnown RBP13.87□□□□□ -0.19
COL9A3-210ENST00000472880 PKD1P98161 4303 aa13.87□□□□□ -0.19
COL9A3-210ENST00000472880 H7BYZ3 331 aa13.87□□□□□ -0.19
COL9A3-210ENST00000472880 SNRPCP09234 159 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms