RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 WDR83OSQ9Y284 106 aa9□□□□□ -0.97
HDAC6-217ENST00000469223 IGHV3OR16-8A0A075B7F1 116 aa8.99□□□□□ -0.97
HDAC6-217ENST00000469223 NBDYA0A0U1RRE5 68 aa8.99□□□□□ -0.97
HDAC6-217ENST00000469223 ZNF207O43670 478 aaKnown RBP8.99□□□□□ -0.97
HDAC6-217ENST00000469223 HBE1P02100 147 aa8.99□□□□□ -0.97
HDAC6-217ENST00000469223 CLEC3BP05452 202 aa8.99□□□□□ -0.97
HDAC6-217ENST00000469223 ARL16Q0P5N6 197 aa8.99□□□□□ -0.97
HDAC6-217ENST00000469223 ACOT6Q3I5F7 207 aaPredicted RBP8.99□□□□□ -0.97
HDAC6-217ENST00000469223 TMEM182Q6ZP80 229 aaPredicted RBP8.99□□□□□ -0.97
HDAC6-217ENST00000469223 TMEM144Q7Z5S9 345 aa8.99□□□□□ -0.97
HDAC6-217ENST00000469223 SYT8Q8NBV8 401 aa8.99□□□□□ -0.97
HDAC6-217ENST00000469223 MISP3Q96FF7 219 aa8.99□□□□□ -0.97
HDAC6-217ENST00000469223 NPCDR1Q9BY65 106 aa8.99□□□□□ -0.97
HDAC6-217ENST00000469223 IGKV3-7A0A075B6H7 116 aa8.98□□□□□ -0.97
HDAC6-217ENST00000469223 CGB1A6NKQ9 187 aa8.98□□□□□ -0.97
HDAC6-217ENST00000469223 PRSS46E5RG02 174 aa8.98□□□□□ -0.97
HDAC6-217ENST00000469223 F8W735 103 aaPredicted RBP8.98□□□□□ -0.97
HDAC6-217ENST00000469223 MT-CO2P00403 227 aa8.98□□□□□ -0.97
HDAC6-217ENST00000469223 REG1AP05451 166 aa8.98□□□□□ -0.97
HDAC6-217ENST00000469223 GIG44P09565 113 aaPredicted RBP8.98□□□□□ -0.97
HDAC6-217ENST00000469223 XGP55808 180 aa8.98□□□□□ -0.97
HDAC6-217ENST00000469223 SELENOTP62341 195 aa8.98□□□□□ -0.97
HDAC6-217ENST00000469223 TMEM41BQ5BJD5 291 aa8.98□□□□□ -0.97
HDAC6-217ENST00000469223 FAM74A1Q5RGS3 127 aa8.98□□□□□ -0.97
HDAC6-217ENST00000469223 PXDC1Q5TGL8 231 aa8.98□□□□□ -0.97
HDAC6-217ENST00000469223 LEMD1Q68G75 181 aa8.98□□□□□ -0.97
HDAC6-217ENST00000469223 Q6ZRG5 221 aa8.98□□□□□ -0.97
HDAC6-217ENST00000469223 S100A7AQ86SG5 101 aa8.98□□□□□ -0.97
HDAC6-217ENST00000469223 VN1R17PQ8TDU5 208 aa8.98□□□□□ -0.97
HDAC6-217ENST00000469223 MED9Q9NWA0 146 aa8.98□□□□□ -0.97
HDAC6-217ENST00000469223 TRAV30A0A087WSZ9 112 aa8.97□□□□□ -0.97
HDAC6-217ENST00000469223 ZFP92A6NM28 416 aa8.97□□□□□ -0.97
HDAC6-217ENST00000469223 NMBP08949 121 aa8.97□□□□□ -0.97
HDAC6-217ENST00000469223 S100A7P31151 101 aa8.97□□□□□ -0.97
HDAC6-217ENST00000469223 NPBWR1P48145 328 aa8.97□□□□□ -0.97
HDAC6-217ENST00000469223 FAM213BQ8TBF2 198 aa8.97□□□□□ -0.97
HDAC6-217ENST00000469223 ACY3Q96HD9 319 aa8.97□□□□□ -0.97
HDAC6-217ENST00000469223 RNF2Q99496 336 aa8.97□□□□□ -0.97
HDAC6-217ENST00000469223 C20orf24Q9BUV8 137 aa8.97□□□□□ -0.97
HDAC6-217ENST00000469223 FAT3Q8TDW7 4589 aa8.96□□□□□ -0.97
HDAC6-217ENST00000469223 A0A1W2PPV4 95 aa8.96□□□□□ -0.98
HDAC6-217ENST00000469223 LINC00862A6NCI5 91 aa8.96□□□□□ -0.98
HDAC6-217ENST00000469223 H2AFB1P0C5Y9 115 aa8.96□□□□□ -0.98
HDAC6-217ENST00000469223 M6PRP20645 277 aa8.96□□□□□ -0.98
HDAC6-217ENST00000469223 RPL29P47914 159 aaKnown RBP8.96□□□□□ -0.98
HDAC6-217ENST00000469223 CMC4P56277 68 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-217ENST00000469223 GAMTQ14353 236 aa8.96□□□□□ -0.98
HDAC6-217ENST00000469223 FFAR4Q5NUL3 377 aa8.96□□□□□ -0.98
HDAC6-217ENST00000469223 SERTAD4-AS1Q5TG53 156 aa8.96□□□□□ -0.98
HDAC6-217ENST00000469223 GBGT1Q8N5D6 347 aa8.96□□□□□ -0.98
HDAC6-217ENST00000469223 ZNF502Q8TBZ5 544 aa8.96□□□□□ -0.98
HDAC6-217ENST00000469223 TMEM170AQ8WVE7 144 aa8.96□□□□□ -0.98
HDAC6-217ENST00000469223 ZNF503Q96F45 646 aa8.96□□□□□ -0.98
HDAC6-217ENST00000469223 ATP6V0BQ99437 205 aa8.96□□□□□ -0.98
HDAC6-217ENST00000469223 RSG1Q9BU20 258 aa8.96□□□□□ -0.98
HDAC6-217ENST00000469223 PBDC1Q9BVG4 233 aa8.96□□□□□ -0.98
HDAC6-217ENST00000469223 ACTR3CQ9C0K3 210 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-217ENST00000469223 SH3BGRL3Q9H299 93 aa8.96□□□□□ -0.98
HDAC6-217ENST00000469223 CLEC5AQ9NY25 188 aa8.96□□□□□ -0.98
HDAC6-217ENST00000469223 PLA2G2DQ9UNK4 145 aa8.96□□□□□ -0.98
HDAC6-217ENST00000469223 AGPAT2O15120 278 aa8.95□□□□□ -0.98
HDAC6-217ENST00000469223 TGOLN2O43493 480 aa8.95□□□□□ -0.98
HDAC6-217ENST00000469223 SMR3BP02814 79 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-217ENST00000469223 B2MP61769 119 aa8.95□□□□□ -0.98
HDAC6-217ENST00000469223 MORN3Q6PF18 240 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-217ENST00000469223 STHQ8IWL8 128 aa8.95□□□□□ -0.98
HDAC6-217ENST00000469223 TMEM116Q8NCL8 245 aa8.95□□□□□ -0.98
HDAC6-217ENST00000469223 OR1L4Q8NGR5 311 aa8.95□□□□□ -0.98
HDAC6-217ENST00000469223 FAM210BQ96KR6 192 aa8.95□□□□□ -0.98
HDAC6-217ENST00000469223 PFDN5Q99471 154 aa8.95□□□□□ -0.98
HDAC6-217ENST00000469223 TXN2Q99757 166 aa8.95□□□□□ -0.98
HDAC6-217ENST00000469223 RNF24Q9Y225 148 aa8.95□□□□□ -0.98
HDAC6-217ENST00000469223 PXMP4Q9Y6I8 212 aa8.95□□□□□ -0.98
HDAC6-217ENST00000469223 IFNA1P01562 189 aa8.94□□□□□ -0.98
HDAC6-217ENST00000469223 HTN3P15516 51 aa8.94□□□□□ -0.98
HDAC6-217ENST00000469223 S100A1P23297 94 aa8.94□□□□□ -0.98
HDAC6-217ENST00000469223 TAGLN2P37802 199 aaKnown RBP8.94□□□□□ -0.98
HDAC6-217ENST00000469223 PPT1P50897 306 aa8.94□□□□□ -0.98
HDAC6-217ENST00000469223 RND2P52198 227 aa8.94□□□□□ -0.98
HDAC6-217ENST00000469223 MFAP4P55083 255 aa8.94□□□□□ -0.98
HDAC6-217ENST00000469223 FAM3BP58499 235 aaPredicted RBP8.94□□□□□ -0.98
HDAC6-217ENST00000469223 SPSB3Q6PJ21 355 aa8.94□□□□□ -0.98
HDAC6-217ENST00000469223 UQCC3Q6UW78 93 aa8.94□□□□□ -0.98
HDAC6-217ENST00000469223 Q6ZSN1 163 aa8.94□□□□□ -0.98
HDAC6-217ENST00000469223 COMMD7Q86VX2 200 aa8.94□□□□□ -0.98
HDAC6-217ENST00000469223 BPIFCQ8NFQ6 507 aa8.94□□□□□ -0.98
HDAC6-217ENST00000469223 OR10G4Q8NGN3 311 aa8.94□□□□□ -0.98
HDAC6-217ENST00000469223 OR10G9Q8NGN4 311 aa8.94□□□□□ -0.98
HDAC6-217ENST00000469223 OR10G7Q8NGN6 311 aa8.94□□□□□ -0.98
HDAC6-217ENST00000469223 OR4X1Q8NH49 305 aa8.94□□□□□ -0.98
HDAC6-217ENST00000469223 TRGV9Q99603 122 aa8.94□□□□□ -0.98
HDAC6-217ENST00000469223 SLC39A9Q9NUM3 307 aa8.94□□□□□ -0.98
HDAC6-217ENST00000469223 IGHV3-49A0A0A0MS15 119 aa8.93□□□□□ -0.98
HDAC6-217ENST00000469223 CTXND1A0A1B0GTU2 59 aa8.93□□□□□ -0.98
HDAC6-217ENST00000469223 RAB19A4D1S5 217 aa8.93□□□□□ -0.98
HDAC6-217ENST00000469223 OR2T8A6NH00 312 aa8.93□□□□□ -0.98
HDAC6-217ENST00000469223 GNG7O60262 68 aa8.93□□□□□ -0.98
HDAC6-217ENST00000469223 TAS2R45P59539 299 aa8.93□□□□□ -0.98
HDAC6-217ENST00000469223 DEFB131AP59861 70 aa8.93□□□□□ -0.98
HDAC6-217ENST00000469223 RHOBP62745 196 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms