RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 VWC2Q2TAL6 325 aa8.32□□□□□ -1.08
CDHR3-205ENST00000468143 SPATA31B1PQ5VZV4 182 aa8.32□□□□□ -1.08
CDHR3-205ENST00000468143 C1orf158Q8N1D5 194 aa8.32□□□□□ -1.08
CDHR3-205ENST00000468143 LINC00476Q8WZB0 136 aa8.32□□□□□ -1.08
CDHR3-205ENST00000468143 CLUHP3Q96NS8 147 aa8.32□□□□□ -1.08
CDHR3-205ENST00000468143 NMES1Q9C002 83 aa8.32□□□□□ -1.08
CDHR3-205ENST00000468143 DNAJC4Q9NNZ3 241 aa8.32□□□□□ -1.08
CDHR3-205ENST00000468143 CELA1Q9UNI1 258 aa8.32□□□□□ -1.08
CDHR3-205ENST00000468143 CSMD3Q7Z407 3707 aa8.31□□□□□ -1.08
CDHR3-205ENST00000468143 A0A087X0K7 114 aa8.31□□□□□ -1.08
CDHR3-205ENST00000468143 E5RGE8 158 aa8.31□□□□□ -1.08
CDHR3-205ENST00000468143 DUSP14O95147 198 aaKnown RBP8.31□□□□□ -1.08
CDHR3-205ENST00000468143 FGF7P21781 194 aa8.31□□□□□ -1.08
CDHR3-205ENST00000468143 PSG3Q16557 428 aa8.31□□□□□ -1.08
CDHR3-205ENST00000468143 ATP6V1FQ16864 119 aa8.31□□□□□ -1.08
CDHR3-205ENST00000468143 AMTNQ6UX39 209 aa8.31□□□□□ -1.08
CDHR3-205ENST00000468143 ZNF705AQ6ZN79 300 aaPredicted RBP8.31□□□□□ -1.08
CDHR3-205ENST00000468143 Q6ZTC4 211 aa8.31□□□□□ -1.08
CDHR3-205ENST00000468143 THAP6Q8TBB0 222 aa8.31□□□□□ -1.08
CDHR3-205ENST00000468143 SLC39A9Q9NUM3 307 aa8.31□□□□□ -1.08
CDHR3-205ENST00000468143 ZNF705FA8MVS1 300 aaPredicted RBP8.3□□□□□ -1.08
CDHR3-205ENST00000468143 IGLL5B9A064 214 aa8.3□□□□□ -1.08
CDHR3-205ENST00000468143 H3BQ15 152 aa8.3□□□□□ -1.08
CDHR3-205ENST00000468143 M0R2Z0 102 aa8.3□□□□□ -1.08
CDHR3-205ENST00000468143 RPL29P47914 159 aaKnown RBP8.3□□□□□ -1.08
CDHR3-205ENST00000468143 B2MP61769 119 aa8.3□□□□□ -1.08
CDHR3-205ENST00000468143 RHOBP62745 196 aa8.3□□□□□ -1.08
CDHR3-205ENST00000468143 CYCSP99999 105 aaKnown RBP8.3□□□□□ -1.08
CDHR3-205ENST00000468143 HIST1H1AQ02539 215 aaPredicted RBP8.3□□□□□ -1.08
CDHR3-205ENST00000468143 CLINT1Q14677 625 aa8.3□□□□□ -1.08
CDHR3-205ENST00000468143 SPINK13Q1W4C9 94 aa8.3□□□□□ -1.08
CDHR3-205ENST00000468143 C12orf74Q32Q52 190 aa8.3□□□□□ -1.08
CDHR3-205ENST00000468143 BPIFA4PQ86YQ2 179 aa8.3□□□□□ -1.08
CDHR3-205ENST00000468143 OR11H7Q8NGC8 314 aa8.3□□□□□ -1.08
CDHR3-205ENST00000468143 OR5C1Q8NGR4 320 aa8.3□□□□□ -1.08
CDHR3-205ENST00000468143 OR1L4Q8NGR5 311 aa8.3□□□□□ -1.08
CDHR3-205ENST00000468143 C2CD4CQ8TF44 421 aa8.3□□□□□ -1.08
CDHR3-205ENST00000468143 RNF126Q9BV68 326 aa8.3□□□□□ -1.08
CDHR3-205ENST00000468143 SLC25A31Q9H0C2 315 aa8.3□□□□□ -1.08
CDHR3-205ENST00000468143 HRH4Q9H3N8 390 aa8.3□□□□□ -1.08
CDHR3-205ENST00000468143 PLA2G2EQ9NZK7 142 aa8.3□□□□□ -1.08
CDHR3-205ENST00000468143 RNF24Q9Y225 148 aa8.3□□□□□ -1.08
CDHR3-205ENST00000468143 GOLT1BQ9Y3E0 138 aa8.3□□□□□ -1.08
CDHR3-205ENST00000468143 PXMP4Q9Y6I8 212 aa8.3□□□□□ -1.08
CDHR3-205ENST00000468143 TRAV12-2A0A075B6T6 113 aa8.29□□□□□ -1.08
CDHR3-205ENST00000468143 A8MTW9 85 aa8.29□□□□□ -1.08
CDHR3-205ENST00000468143 SLC17A3O00476 420 aa8.29□□□□□ -1.08
CDHR3-205ENST00000468143 PRM2P04554 102 aa8.29□□□□□ -1.08
CDHR3-205ENST00000468143 GCSAMLQ5JQS6 135 aa8.29□□□□□ -1.08
CDHR3-205ENST00000468143 OR8A1Q8NGG7 326 aa8.29□□□□□ -1.08
CDHR3-205ENST00000468143 PPP1R1CQ8WVI7 109 aa8.29□□□□□ -1.08
CDHR3-205ENST00000468143 RPUSD4Q96CM3 377 aaKnown RBP8.29□□□□□ -1.08
CDHR3-205ENST00000468143 NEU1Q99519 415 aa8.29□□□□□ -1.08
CDHR3-205ENST00000468143 ZNF331Q9NQX6 463 aaPredicted RBP8.29□□□□□ -1.08
CDHR3-205ENST00000468143 PPP1R14DQ9NXH3 145 aa8.29□□□□□ -1.08
CDHR3-205ENST00000468143 HYDINQ4G0P3 5121 aa8.28□□□□□ -1.08
CDHR3-205ENST00000468143 SMIM9A6NGZ8 99 aa8.28□□□□□ -1.08
CDHR3-205ENST00000468143 C11orf94C9JXX5 98 aa8.28□□□□□ -1.08
CDHR3-205ENST00000468143 PRAC2D3DTV9 90 aa8.28□□□□□ -1.08
CDHR3-205ENST00000468143 CRXO43186 299 aaPredicted RBP8.28□□□□□ -1.08
CDHR3-205ENST00000468143 IGLC2P0DOY2 106 aa8.28□□□□□ -1.08
CDHR3-205ENST00000468143 LCN15Q6UWW0 184 aa8.28□□□□□ -1.08
CDHR3-205ENST00000468143 BAP18Q8IXM2 172 aa8.28□□□□□ -1.08
CDHR3-205ENST00000468143 IGF2BP2-AS1Q96M15 143 aa8.28□□□□□ -1.08
CDHR3-205ENST00000468143 PFDN5Q99471 154 aa8.28□□□□□ -1.08
CDHR3-205ENST00000468143 TMEM208Q9BTX3 173 aa8.28□□□□□ -1.08
CDHR3-205ENST00000468143 NPCDR1Q9BY65 106 aa8.28□□□□□ -1.08
CDHR3-205ENST00000468143 RFNGQ9Y644 331 aa8.28□□□□□ -1.08
CDHR3-205ENST00000468143 PLECQ15149 4684 aaKnown RBP8.27□□□□□ -1.09
CDHR3-205ENST00000468143 TRAV10A0A0B4J240 114 aa8.27□□□□□ -1.09
CDHR3-205ENST00000468143 LOC102723971A0A1B0GUV8 181 aa8.27□□□□□ -1.09
CDHR3-205ENST00000468143 ZNF705GA8MUZ8 300 aaPredicted RBP8.27□□□□□ -1.09
CDHR3-205ENST00000468143 MPC2O95563 127 aa8.27□□□□□ -1.09
CDHR3-205ENST00000468143 HBE1P02100 147 aa8.27□□□□□ -1.09
CDHR3-205ENST00000468143 SPART-AS1P0CW21 52 aa8.27□□□□□ -1.09
CDHR3-205ENST00000468143 RRN3P1Q2M238 152 aa8.27□□□□□ -1.09
CDHR3-205ENST00000468143 CHAC2Q8WUX2 184 aa8.27□□□□□ -1.09
CDHR3-205ENST00000468143 SAT2Q96F10 170 aaPredicted RBP8.27□□□□□ -1.09
CDHR3-205ENST00000468143 SLC50A1Q9BRV3 221 aa8.27□□□□□ -1.09
CDHR3-205ENST00000468143 PARD6GQ9BYG4 376 aaPredicted RBP8.27□□□□□ -1.09
CDHR3-205ENST00000468143 SMIM3Q9BZL3 60 aa8.27□□□□□ -1.09
CDHR3-205ENST00000468143 ZNF586Q9NXT0 402 aa8.27□□□□□ -1.09
CDHR3-205ENST00000468143 APLNQ9ULZ1 77 aa8.27□□□□□ -1.09
CDHR3-205ENST00000468143 ALG5Q9Y673 324 aa8.27□□□□□ -1.09
CDHR3-205ENST00000468143 DNAH1Q9P2D7 4330 aa8.26□□□□□ -1.09
CDHR3-205ENST00000468143 DEFB131BA0A096LNP1 70 aa8.26□□□□□ -1.09
CDHR3-205ENST00000468143 BOLA2-SMG1P6H3BVE0 249 aa8.26□□□□□ -1.09
CDHR3-205ENST00000468143 MPDU1O75352 247 aa8.26□□□□□ -1.09
CDHR3-205ENST00000468143 AMBPP02760 352 aa8.26□□□□□ -1.09
CDHR3-205ENST00000468143 PYYP10082 97 aa8.26□□□□□ -1.09
CDHR3-205ENST00000468143 CXCL2P19875 107 aa8.26□□□□□ -1.09
CDHR3-205ENST00000468143 FAM222AQ5U5X8 452 aa8.26□□□□□ -1.09
CDHR3-205ENST00000468143 RPP25LQ8N5L8 163 aaKnown RBP8.26□□□□□ -1.09
CDHR3-205ENST00000468143 WDR61Q9GZS3 305 aaKnown RBP8.26□□□□□ -1.09
CDHR3-205ENST00000468143 YTHDF2Q9Y5A9 579 aaKnown RBP8.26□□□□□ -1.09
CDHR3-205ENST00000468143 IGHV4-4A0A075B6R2 117 aa8.25□□□□□ -1.09
CDHR3-205ENST00000468143 TMEM189A5PLL7 270 aa8.25□□□□□ -1.09
CDHR3-205ENST00000468143 INSP01308 110 aa8.25□□□□□ -1.09
CDHR3-205ENST00000468143 HTN1P15515 57 aa8.25□□□□□ -1.09
CDHR3-205ENST00000468143 AZU1P20160 251 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms