RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 ARPINQ7Z6K5 226 aa-0.23□□□□□ -2.45
SMC4-207ENST00000467263 OR4K15Q8NH41 348 aa-0.23□□□□□ -2.45
SMC4-207ENST00000467263 CHCHD1Q96BP2 118 aaKnown RBP-0.23□□□□□ -2.45
SMC4-207ENST00000467263 CCL19Q99731 98 aa-0.23□□□□□ -2.45
SMC4-207ENST00000467263 TCEAL2Q9H3H9 227 aaPredicted RBP-0.23□□□□□ -2.45
SMC4-207ENST00000467263 PTPRDP23468 1912 aa-0.23□□□□□ -2.45
SMC4-207ENST00000467263 TRAV27A0A087WT01 109 aa-0.24□□□□□ -2.45
SMC4-207ENST00000467263 DYNLT3P51808 116 aa-0.24□□□□□ -2.45
SMC4-207ENST00000467263 MYL6P60660 151 aa-0.24□□□□□ -2.45
SMC4-207ENST00000467263 S100A7AQ86SG5 101 aa-0.24□□□□□ -2.45
SMC4-207ENST00000467263 ERBINQ96RT1 1412 aa-0.24□□□□□ -2.45
SMC4-207ENST00000467263 IFNA7P01567 189 aa-0.25□□□□□ -2.45
SMC4-207ENST00000467263 PPP1R14BQ96C90 147 aa-0.25□□□□□ -2.45
SMC4-207ENST00000467263 BTF3L4Q96K17 158 aa-0.25□□□□□ -2.45
SMC4-207ENST00000467263 TEX37Q96LM6 180 aa-0.25□□□□□ -2.45
SMC4-207ENST00000467263 HYLS1Q96M11 299 aa-0.25□□□□□ -2.45
SMC4-207ENST00000467263 LRP1Q07954 4544 aaKnown RBP-0.26□□□□□ -2.45
SMC4-207ENST00000467263 C9orf170A2RU37 121 aa-0.26□□□□□ -2.45
SMC4-207ENST00000467263 HMGB3O15347 200 aaKnown RBP-0.26□□□□□ -2.45
SMC4-207ENST00000467263 PXT1Q8NFP0 134 aa-0.26□□□□□ -2.45
SMC4-207ENST00000467263 ARL5BQ96KC2 179 aa-0.26□□□□□ -2.45
SMC4-207ENST00000467263 NMNAT1Q9HAN9 279 aaPredicted RBP-0.26□□□□□ -2.45
SMC4-207ENST00000467263 FAM32AQ9Y421 112 aaKnown RBP-0.26□□□□□ -2.45
SMC4-207ENST00000467263 ANK2Q01484 3957 aa-0.27□□□□□ -2.45
SMC4-207ENST00000467263 CELSR1Q9NYQ6 3014 aa-0.27□□□□□ -2.45
SMC4-207ENST00000467263 FAM159BA6NKW6 160 aa-0.27□□□□□ -2.45
SMC4-207ENST00000467263 VBP1P61758 197 aa-0.27□□□□□ -2.45
SMC4-207ENST00000467263 TAF1AQ15573 450 aaPredicted RBP-0.27□□□□□ -2.45
SMC4-207ENST00000467263 GOLT1AQ6ZVE7 132 aa-0.27□□□□□ -2.45
SMC4-207ENST00000467263 PRR15Q8IV56 129 aa-0.27□□□□□ -2.45
SMC4-207ENST00000467263 ENY2Q9NPA8 101 aa-0.27□□□□□ -2.45
SMC4-207ENST00000467263 BOKQ9UMX3 212 aaPredicted RBP-0.27□□□□□ -2.45
SMC4-207ENST00000467263 CEP164Q9UPV0 1460 aa-0.28□□□□□ -2.45
SMC4-207ENST00000467263 CRHP06850 196 aa-0.28□□□□□ -2.45
SMC4-207ENST00000467263 NFYBP25208 207 aa-0.28□□□□□ -2.45
SMC4-207ENST00000467263 LIN52Q52LA3 116 aa-0.28□□□□□ -2.45
SMC4-207ENST00000467263 LRRC18Q8N456 261 aa-0.28□□□□□ -2.45
SMC4-207ENST00000467263 ZNF714Q96N38 554 aa-0.28□□□□□ -2.45
SMC4-207ENST00000467263 LIMD2Q9BT23 127 aa-0.28□□□□□ -2.45
SMC4-207ENST00000467263 BCORL1Q5H9F3 1711 aa-0.28□□□□□ -2.45
SMC4-207ENST00000467263 PLB1Q6P1J6 1458 aa-0.29□□□□□ -2.46
SMC4-207ENST00000467263 A0A096LPI6 279 aa-0.29□□□□□ -2.46
SMC4-207ENST00000467263 BANF1O75531 89 aa-0.29□□□□□ -2.46
SMC4-207ENST00000467263 SPA17Q15506 151 aa-0.29□□□□□ -2.46
SMC4-207ENST00000467263 OR10X1Q8NGY0 326 aa-0.29□□□□□ -2.46
SMC4-207ENST00000467263 ZHX1-C8orf76Q96EF9 292 aa-0.29□□□□□ -2.46
SMC4-207ENST00000467263 RMND5BQ96G75 393 aaPredicted RBP-0.29□□□□□ -2.46
SMC4-207ENST00000467263 POPDC3Q9HBV1 291 aa-0.29□□□□□ -2.46
SMC4-207ENST00000467263 NUP210LQ5VU65 1888 aa-0.3□□□□□ -2.46
SMC4-207ENST00000467263 hDV103S1A0JD37 113 aa-0.3□□□□□ -2.46
SMC4-207ENST00000467263 TMEM114B3SHH9 223 aa-0.3□□□□□ -2.46
SMC4-207ENST00000467263 GPR31O00270 319 aa-0.3□□□□□ -2.46
SMC4-207ENST00000467263 CD3DP04234 171 aa-0.3□□□□□ -2.46
SMC4-207ENST00000467263 CDKN2CP42773 168 aa-0.3□□□□□ -2.46
SMC4-207ENST00000467263 RPL37AP61513 92 aaKnown RBP-0.3□□□□□ -2.46
SMC4-207ENST00000467263 KLRD1Q13241 179 aa-0.3□□□□□ -2.46
SMC4-207ENST00000467263 UBR2Q8IWV8 1755 aa-0.31□□□□□ -2.46
SMC4-207ENST00000467263 LY6G6CO95867 125 aa-0.31□□□□□ -2.46
SMC4-207ENST00000467263 CXCL1P09341 107 aa-0.31□□□□□ -2.46
SMC4-207ENST00000467263 CCL7P80098 99 aa-0.31□□□□□ -2.46
SMC4-207ENST00000467263 PRAP1Q96NZ9 151 aa-0.31□□□□□ -2.46
SMC4-207ENST00000467263 CACYBPQ9HB71 228 aaKnown RBP-0.31□□□□□ -2.46
SMC4-207ENST00000467263 SLC22A13Q9Y226 551 aa-0.31□□□□□ -2.46
SMC4-207ENST00000467263 MIA2Q96PC5 1412 aa-0.31□□□□□ -2.46
SMC4-207ENST00000467263 ABCA12Q86UK0 2595 aa-0.32□□□□□ -2.46
SMC4-207ENST00000467263 K7ERJ3 54 aa-0.32□□□□□ -2.46
SMC4-207ENST00000467263 CYBAP13498 195 aa-0.32□□□□□ -2.46
SMC4-207ENST00000467263 TMBIM6P55061 237 aa-0.32□□□□□ -2.46
SMC4-207ENST00000467263 ARPP19P56211 112 aa-0.32□□□□□ -2.46
SMC4-207ENST00000467263 MIR22HGQ0VDD5 57 aa-0.32□□□□□ -2.46
SMC4-207ENST00000467263 CASC2Q6XLA1 102 aa-0.32□□□□□ -2.46
SMC4-207ENST00000467263 FOXI2Q6ZQN5 318 aa-0.32□□□□□ -2.46
SMC4-207ENST00000467263 IGHV3-33P01772 117 aa-0.33□□□□□ -2.46
SMC4-207ENST00000467263 LINC00299Q6ZSB3 139 aa-0.33□□□□□ -2.46
SMC4-207ENST00000467263 IFT20Q8IY31 132 aa-0.33□□□□□ -2.46
SMC4-207ENST00000467263 C9orf16Q9BUW7 83 aa-0.33□□□□□ -2.46
SMC4-207ENST00000467263 N4BP2Q86UW6 1770 aaPredicted RBP-0.33□□□□□ -2.46
SMC4-207ENST00000467263 MACF1Q9UPN3 7388 aaKnown RBP-0.34□□□□□ -2.46
SMC4-207ENST00000467263 DUXBA0A1W2PPF3 345 aa-0.34□□□□□ -2.46
SMC4-207ENST00000467263 RER1O15258 196 aa-0.34□□□□□ -2.46
SMC4-207ENST00000467263 UBR5O95071 2799 aaPredicted RBP-0.34□□□□□ -2.46
SMC4-207ENST00000467263 PDE6GP18545 87 aa-0.34□□□□□ -2.46
SMC4-207ENST00000467263 INSL3P51460 131 aa-0.34□□□□□ -2.46
SMC4-207ENST00000467263 NCALDP61601 193 aa-0.34□□□□□ -2.46
SMC4-207ENST00000467263 RGS21Q2M5E4 152 aa-0.34□□□□□ -2.46
SMC4-207ENST00000467263 PPTC7Q8NI37 304 aa-0.34□□□□□ -2.46
SMC4-207ENST00000467263 PARVGQ9HBI0 331 aa-0.34□□□□□ -2.46
SMC4-207ENST00000467263 TTC28Q96AY4 2481 aa-0.35□□□□□ -2.46
SMC4-207ENST00000467263 HSPE1P61604 102 aaKnown RBP-0.35□□□□□ -2.47
SMC4-207ENST00000467263 LYG2Q86SG7 212 aa-0.35□□□□□ -2.47
SMC4-207ENST00000467263 ASB4Q9Y574 426 aa-0.35□□□□□ -2.47
SMC4-207ENST00000467263 CACNA1HO95180 2353 aa-0.36□□□□□ -2.47
SMC4-207ENST00000467263 ODAMA1E959 279 aa-0.36□□□□□ -2.47
SMC4-207ENST00000467263 SERPINA1P01009 418 aa-0.36□□□□□ -2.47
SMC4-207ENST00000467263 C1QBP02746 253 aa-0.36□□□□□ -2.47
SMC4-207ENST00000467263 CST2P09228 141 aa-0.36□□□□□ -2.47
SMC4-207ENST00000467263 IDO1P14902 403 aa-0.36□□□□□ -2.47
SMC4-207ENST00000467263 ASB16-AS1Q495Z4 193 aa-0.36□□□□□ -2.47
SMC4-207ENST00000467263 C10orf111Q8N326 155 aa-0.36□□□□□ -2.47
SMC4-207ENST00000467263 PCF11O94913 1555 aaKnown RBP-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms