RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 SLC25A2Q9BXI2 301 aa14.89□□□□□ -0.03
SKA3-205ENST00000465471 ZNF331Q9NQX6 463 aaPredicted RBP14.89□□□□□ -0.03
SKA3-205ENST00000465471 RPRMQ9NS64 109 aa14.89□□□□□ -0.03
SKA3-205ENST00000465471 DEFB135Q30KP9 77 aa14.88□□□□□ -0.03
SKA3-205ENST00000465471 IGFL4Q6B9Z1 124 aa14.88□□□□□ -0.03
SKA3-205ENST00000465471 MORN3Q6PF18 240 aaPredicted RBP14.88□□□□□ -0.03
SKA3-205ENST00000465471 RNF182Q8N6D2 247 aa14.88□□□□□ -0.03
SKA3-205ENST00000465471 OR2G3Q8NGZ4 309 aa14.88□□□□□ -0.03
SKA3-205ENST00000465471 SAT2Q96F10 170 aaPredicted RBP14.88□□□□□ -0.03
SKA3-205ENST00000465471 SLC50A1Q9BRV3 221 aa14.88□□□□□ -0.03
SKA3-205ENST00000465471 FUT9Q9Y231 359 aa14.88□□□□□ -0.03
SKA3-205ENST00000465471 A0A0J9YX75 114 aa14.87□□□□□ -0.03
SKA3-205ENST00000465471 A8MTW9 85 aa14.87□□□□□ -0.03
SKA3-205ENST00000465471 SLC17A3O00476 420 aa14.87□□□□□ -0.03
SKA3-205ENST00000465471 ARPC5O15511 151 aa14.87□□□□□ -0.03
SKA3-205ENST00000465471 CA1P00915 261 aaPredicted RBP14.87□□□□□ -0.03
SKA3-205ENST00000465471 C4BPBP20851 252 aa14.87□□□□□ -0.03
SKA3-205ENST00000465471 GUK1Q16774 197 aa14.87□□□□□ -0.03
SKA3-205ENST00000465471 MIR17HGQ75NE6 70 aa14.87□□□□□ -0.03
SKA3-205ENST00000465471 OR11H4Q8NGC9 324 aa14.87□□□□□ -0.03
SKA3-205ENST00000465471 WWC2-AS2Q96NR7 200 aa14.87□□□□□ -0.03
SKA3-205ENST00000465471 PSMG3Q9BT73 122 aaPredicted RBP14.87□□□□□ -0.03
SKA3-205ENST00000465471 EDA2RQ9HAV5 297 aa14.87□□□□□ -0.03
SKA3-205ENST00000465471 ZNF586Q9NXT0 402 aa14.87□□□□□ -0.03
SKA3-205ENST00000465471 F6UB75 175 aa14.86□□□□□ -0.03
SKA3-205ENST00000465471 SPRY2O43597 315 aa14.86□□□□□ -0.03
SKA3-205ENST00000465471 ZNF253O75346 499 aa14.86□□□□□ -0.03
SKA3-205ENST00000465471 SNRPCP09234 159 aaKnown RBP14.86□□□□□ -0.03
SKA3-205ENST00000465471 HLA-DMBP28068 263 aa14.86□□□□□ -0.03
SKA3-205ENST00000465471 TMEM41BQ5BJD5 291 aa14.86□□□□□ -0.03
SKA3-205ENST00000465471 RPL7L1Q6DKI1 246 aaKnown RBP14.86□□□□□ -0.03
SKA3-205ENST00000465471 HSD17B11Q8NBQ5 300 aa14.86□□□□□ -0.03
SKA3-205ENST00000465471 ST6GAL2Q96JF0 529 aa14.86□□□□□ -0.03
SKA3-205ENST00000465471 HMSDA8MTL9 139 aa14.85□□□□□ -0.03
SKA3-205ENST00000465471 H3BTX0 84 aa14.85□□□□□ -0.03
SKA3-205ENST00000465471 PYYP10082 97 aa14.85□□□□□ -0.03
SKA3-205ENST00000465471 HIST1H1EP10412 219 aaKnown RBP14.85□□□□□ -0.03
SKA3-205ENST00000465471 ATP6V0CP27449 155 aa14.85□□□□□ -0.03
SKA3-205ENST00000465471 ZNF345Q14585 488 aa14.85□□□□□ -0.03
SKA3-205ENST00000465471 PSG3Q16557 428 aa14.85□□□□□ -0.03
SKA3-205ENST00000465471 MFFQ9GZY8 342 aa14.85□□□□□ -0.03
SKA3-205ENST00000465471 TRBV19A0A075B6N1 114 aa14.84□□□□□ -0.03
SKA3-205ENST00000465471 M6PRP20645 277 aa14.84□□□□□ -0.03
SKA3-205ENST00000465471 RHOBP62745 196 aa14.84□□□□□ -0.03
SKA3-205ENST00000465471 PDE6HQ13956 83 aa14.84□□□□□ -0.03
SKA3-205ENST00000465471 EBLN2Q6P2I7 272 aa14.84□□□□□ -0.03
SKA3-205ENST00000465471 LRRC20Q8TCA0 184 aa14.84□□□□□ -0.03
SKA3-205ENST00000465471 TAAR5O14804 337 aa14.83□□□□□ -0.04
SKA3-205ENST00000465471 NDUFB4O95168 129 aa14.83□□□□□ -0.04
SKA3-205ENST00000465471 RAB2AP61019 212 aa14.83□□□□□ -0.04
SKA3-205ENST00000465471 ACOT6Q3I5F7 207 aaPredicted RBP14.83□□□□□ -0.04
SKA3-205ENST00000465471 KCNRGQ8N5I3 272 aa14.83□□□□□ -0.04
SKA3-205ENST00000465471 CSNK1G2-AS1Q8NCQ2 148 aa14.83□□□□□ -0.04
SKA3-205ENST00000465471 ZNF738Q8NE65 137 aa14.83□□□□□ -0.04
SKA3-205ENST00000465471 ZNF503Q96F45 646 aa14.83□□□□□ -0.04
SKA3-205ENST00000465471 CYTL1Q9NRR1 136 aa14.83□□□□□ -0.04
SKA3-205ENST00000465471 CLEC5AQ9NY25 188 aa14.83□□□□□ -0.04
SKA3-205ENST00000465471 BORCS7-ASMTA0A0B4J1R7 106 aa14.82□□□□□ -0.04
SKA3-205ENST00000465471 SERF2P84101 59 aa14.82□□□□□ -0.04
SKA3-205ENST00000465471 TCTE3Q8IZS6 198 aa14.82□□□□□ -0.04
SKA3-205ENST00000465471 FXYD5Q96DB9 178 aa14.82□□□□□ -0.04
SKA3-205ENST00000465471 SH3BGRL3Q9H299 93 aa14.82□□□□□ -0.04
SKA3-205ENST00000465471 OR51M1Q9H341 326 aa14.82□□□□□ -0.04
SKA3-205ENST00000465471 NUTF2P61970 127 aaKnown RBP14.81□□□□□ -0.04
SKA3-205ENST00000465471 AMTNQ6UX39 209 aa14.81□□□□□ -0.04
SKA3-205ENST00000465471 RPUSD4Q96CM3 377 aaKnown RBP14.81□□□□□ -0.04
SKA3-205ENST00000465471 GNPNAT1Q96EK6 184 aaPredicted RBP14.81□□□□□ -0.04
SKA3-205ENST00000465471 PAXXQ9BUH6 204 aa14.81□□□□□ -0.04
SKA3-205ENST00000465471 JTBO76095 146 aa14.8□□□□□ -0.04
SKA3-205ENST00000465471 DUSP14O95147 198 aaKnown RBP14.8□□□□□ -0.04
SKA3-205ENST00000465471 CNN1P51911 297 aaKnown RBP14.8□□□□□ -0.04
SKA3-205ENST00000465471 KHDC3LQ587J8 217 aa14.8□□□□□ -0.04
SKA3-205ENST00000465471 OR4B1Q8NGF8 309 aa14.8□□□□□ -0.04
SKA3-205ENST00000465471 OR8A1Q8NGG7 326 aa14.8□□□□□ -0.04
SKA3-205ENST00000465471 IGKV3-20P01619 116 aa14.79□□□□□ -0.04
SKA3-205ENST00000465471 NBEAP1P0C6P0 100 aa14.79□□□□□ -0.04
SKA3-205ENST00000465471 TAS2R45P59539 299 aa14.79□□□□□ -0.04
SKA3-205ENST00000465471 PSG9Q00887 426 aa14.79□□□□□ -0.04
SKA3-205ENST00000465471 RPP25LQ8N5L8 163 aaKnown RBP14.79□□□□□ -0.04
SKA3-205ENST00000465471 OR10G4Q8NGN3 311 aa14.79□□□□□ -0.04
SKA3-205ENST00000465471 OR10G9Q8NGN4 311 aa14.79□□□□□ -0.04
SKA3-205ENST00000465471 OR10G7Q8NGN6 311 aa14.79□□□□□ -0.04
SKA3-205ENST00000465471 RNF141Q8WVD5 230 aa14.79□□□□□ -0.04
SKA3-205ENST00000465471 MRPL53Q96EL3 112 aaKnown RBP14.79□□□□□ -0.04
SKA3-205ENST00000465471 C1QTNF4Q9BXJ3 329 aa14.79□□□□□ -0.04
SKA3-205ENST00000465471 ZNF705FA8MVS1 300 aaPredicted RBP14.78□□□□□ -0.04
SKA3-205ENST00000465471 OR7C2O60412 319 aa14.78□□□□□ -0.04
SKA3-205ENST00000465471 MBP02144 154 aa14.78□□□□□ -0.04
SKA3-205ENST00000465471 OR10J4P0C629 311 aa14.78□□□□□ -0.04
SKA3-205ENST00000465471 ZNF705DP0CH99 300 aaPredicted RBP14.78□□□□□ -0.04
SKA3-205ENST00000465471 ZNF705BP0CI00 300 aaPredicted RBP14.78□□□□□ -0.04
SKA3-205ENST00000465471 ARPC5LQ9BPX5 153 aa14.78□□□□□ -0.04
SKA3-205ENST00000465471 SLC35B3Q9H1N7 401 aa14.78□□□□□ -0.04
SKA3-205ENST00000465471 A0A0D9SG52 128 aa14.77□□□□□ -0.05
SKA3-205ENST00000465471 ZNF705EA8MWA4 302 aaPredicted RBP14.77□□□□□ -0.05
SKA3-205ENST00000465471 PRAC2D3DTV9 90 aa14.77□□□□□ -0.05
SKA3-205ENST00000465471 FAM122CQ6P4D5 195 aa14.77□□□□□ -0.05
SKA3-205ENST00000465471 OR11H2Q8NH07 326 aa14.77□□□□□ -0.05
SKA3-205ENST00000465471 BLNKQ8WV28 456 aa14.77□□□□□ -0.05
SKA3-205ENST00000465471 RARRES2Q99969 163 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms