RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 BOLA2-SMG1P6H3BVE0 249 aa14.7□□□□□ -0.06
CSPG5-204ENST00000465441 MRPS12O15235 138 aaKnown RBP14.7□□□□□ -0.06
CSPG5-204ENST00000465441 DEFB130BP0DP73 79 aa14.7□□□□□ -0.06
CSPG5-204ENST00000465441 DEFB130AP0DP74 79 aa14.7□□□□□ -0.06
CSPG5-204ENST00000465441 TSPOP30536 169 aa14.7□□□□□ -0.06
CSPG5-204ENST00000465441 BTCP35070 178 aa14.7□□□□□ -0.06
CSPG5-204ENST00000465441 SLC38A11Q08AI6 406 aa14.7□□□□□ -0.06
CSPG5-204ENST00000465441 ARL16Q0P5N6 197 aa14.7□□□□□ -0.06
CSPG5-204ENST00000465441 TEPPQ6URK8 271 aa14.7□□□□□ -0.06
CSPG5-204ENST00000465441 ZBTB8BQ8NAP8 495 aaPredicted RBP14.7□□□□□ -0.06
CSPG5-204ENST00000465441 GSKIPQ9P0R6 139 aa14.7□□□□□ -0.06
CSPG5-204ENST00000465441 MGAT4CQ9UBM8 478 aa14.7□□□□□ -0.06
CSPG5-204ENST00000465441 DNAH11Q96DT5 4516 aa14.7□□□□□ -0.06
CSPG5-204ENST00000465441 K7EPK0 472 aa14.69□□□□□ -0.06
CSPG5-204ENST00000465441 TSC22D2O75157 780 aa14.69□□□□□ -0.06
CSPG5-204ENST00000465441 TAS2R30P59541 319 aa14.69□□□□□ -0.06
CSPG5-204ENST00000465441 S100A7AQ86SG5 101 aa14.69□□□□□ -0.06
CSPG5-204ENST00000465441 C15orf53Q8NAA6 179 aa14.69□□□□□ -0.06
CSPG5-204ENST00000465441 PPP1R14DQ9NXH3 145 aa14.69□□□□□ -0.06
CSPG5-204ENST00000465441 PKHD1P08F94 4074 aa14.69□□□□□ -0.06
CSPG5-204ENST00000465441 CENPXA8MT69 81 aa14.68□□□□□ -0.06
CSPG5-204ENST00000465441 SNRPCP09234 159 aaKnown RBP14.68□□□□□ -0.06
CSPG5-204ENST00000465441 MED14OSP0DP75 135 aa14.68□□□□□ -0.06
CSPG5-204ENST00000465441 IL7P13232 177 aa14.68□□□□□ -0.06
CSPG5-204ENST00000465441 LINC00299Q6ZSB3 139 aa14.68□□□□□ -0.06
CSPG5-204ENST00000465441 MITD1Q8WV92 249 aa14.68□□□□□ -0.06
CSPG5-204ENST00000465441 RCL1Q9Y2P8 373 aaKnown RBP14.68□□□□□ -0.06
CSPG5-204ENST00000465441 NACAE9PAV3 2078 aa14.68□□□□□ -0.06
CSPG5-204ENST00000465441 GOSR2O14653 212 aa14.67□□□□□ -0.06
CSPG5-204ENST00000465441 LINC00305Q7Z4B0 112 aa14.67□□□□□ -0.06
CSPG5-204ENST00000465441 RPUSD4Q96CM3 377 aaKnown RBP14.67□□□□□ -0.06
CSPG5-204ENST00000465441 RNF24Q9Y225 148 aa14.67□□□□□ -0.06
CSPG5-204ENST00000465441 PCLOQ9Y6V0 5065 aa14.66□□□□□ -0.06
CSPG5-204ENST00000465441 C7orf66A4D0T2 115 aa14.66□□□□□ -0.06
CSPG5-204ENST00000465441 F5H768 121 aa14.66□□□□□ -0.06
CSPG5-204ENST00000465441 AGPAT2O15120 278 aa14.66□□□□□ -0.06
CSPG5-204ENST00000465441 MBPP02686 304 aaPredicted RBP14.66□□□□□ -0.06
CSPG5-204ENST00000465441 HTN1P15515 57 aa14.66□□□□□ -0.06
CSPG5-204ENST00000465441 TAS2R60P59551 318 aa14.66□□□□□ -0.06
CSPG5-204ENST00000465441 PXDC1Q5TGL8 231 aa14.66□□□□□ -0.06
CSPG5-204ENST00000465441 TMEM256Q8N2U0 113 aa14.66□□□□□ -0.06
CSPG5-204ENST00000465441 GGACTQ9BVM4 153 aa14.66□□□□□ -0.06
CSPG5-204ENST00000465441 A6NHS1 94 aa14.65□□□□□ -0.06
CSPG5-204ENST00000465441 CBY3A6NI87 242 aa14.65□□□□□ -0.06
CSPG5-204ENST00000465441 CDKN1BP46527 198 aa14.65□□□□□ -0.06
CSPG5-204ENST00000465441 SOHLH1Q5JUK2 328 aa14.65□□□□□ -0.06
CSPG5-204ENST00000465441 C1orf134Q5TEV5 83 aa14.65□□□□□ -0.06
CSPG5-204ENST00000465441 TMEM37Q8WXS4 190 aa14.65□□□□□ -0.06
CSPG5-204ENST00000465441 ATG101Q9BSB4 218 aa14.65□□□□□ -0.06
CSPG5-204ENST00000465441 ZNF331Q9NQX6 463 aaPredicted RBP14.65□□□□□ -0.06
CSPG5-204ENST00000465441 CXCL2P19875 107 aa14.64□□□□□ -0.07
CSPG5-204ENST00000465441 FAM3BP58499 235 aaPredicted RBP14.64□□□□□ -0.07
CSPG5-204ENST00000465441 CNPY1Q3B7I2 92 aa14.64□□□□□ -0.07
CSPG5-204ENST00000465441 ZNF546Q86UE3 836 aa14.64□□□□□ -0.07
CSPG5-204ENST00000465441 MGST2Q99735 147 aa14.64□□□□□ -0.07
CSPG5-204ENST00000465441 PLA2G10O15496 165 aa14.63□□□□□ -0.07
CSPG5-204ENST00000465441 NUDT3O95989 172 aa14.63□□□□□ -0.07
CSPG5-204ENST00000465441 ATP5G1P05496 136 aa14.63□□□□□ -0.07
CSPG5-204ENST00000465441 ATP5G3P48201 142 aa14.63□□□□□ -0.07
CSPG5-204ENST00000465441 KIR3DS1Q14943 382 aa14.63□□□□□ -0.07
CSPG5-204ENST00000465441 MORN5Q5VZ52 161 aa14.63□□□□□ -0.07
CSPG5-204ENST00000465441 LCN15Q6UWW0 184 aa14.63□□□□□ -0.07
CSPG5-204ENST00000465441 BPIFA4PQ86YQ2 179 aa14.63□□□□□ -0.07
CSPG5-204ENST00000465441 C16orf74Q96GX8 76 aa14.63□□□□□ -0.07
CSPG5-204ENST00000465441 SLC50A1Q9BRV3 221 aa14.63□□□□□ -0.07
CSPG5-204ENST00000465441 TIMM8BQ9Y5J9 83 aaPredicted RBP14.63□□□□□ -0.07
CSPG5-204ENST00000465441 PRAC2D3DTV9 90 aa14.62□□□□□ -0.07
CSPG5-204ENST00000465441 H3BTX0 84 aa14.62□□□□□ -0.07
CSPG5-204ENST00000465441 CCSO14618 274 aa14.62□□□□□ -0.07
CSPG5-204ENST00000465441 CCDC32Q9BV29 185 aa14.62□□□□□ -0.07
CSPG5-204ENST00000465441 PARD6GQ9BYG4 376 aaPredicted RBP14.62□□□□□ -0.07
CSPG5-204ENST00000465441 L7N2F9 121 aa14.61□□□□□ -0.07
CSPG5-204ENST00000465441 COX7A2P2O60397 106 aa14.61□□□□□ -0.07
CSPG5-204ENST00000465441 VAMP2P63027 116 aa14.61□□□□□ -0.07
CSPG5-204ENST00000465441 NOP10Q9NPE3 64 aaKnown RBP14.61□□□□□ -0.07
CSPG5-204ENST00000465441 LSM5Q9Y4Y9 91 aaKnown RBP14.61□□□□□ -0.07
CSPG5-204ENST00000465441 OPCMLQ14982 345 aa14.6□□□□□ -0.07
CSPG5-204ENST00000465441 C10orf113Q5VZT2 155 aa14.6□□□□□ -0.07
CSPG5-204ENST00000465441 ZNF493Q6ZR52 646 aa14.6□□□□□ -0.07
CSPG5-204ENST00000465441 ZNRF2Q8NHG8 242 aa14.6□□□□□ -0.07
CSPG5-204ENST00000465441 RNASE8Q8TDE3 154 aaKnown RBP14.6□□□□□ -0.07
CSPG5-204ENST00000465441 SAT2Q96F10 170 aaPredicted RBP14.6□□□□□ -0.07
CSPG5-204ENST00000465441 C20orf85Q9H1P6 137 aa14.6□□□□□ -0.07
CSPG5-204ENST00000465441 DNAJC4Q9NNZ3 241 aa14.6□□□□□ -0.07
CSPG5-204ENST00000465441 FAM24AA6NFZ4 105 aa14.59□□□□□ -0.07
CSPG5-204ENST00000465441 H3BQ15 152 aa14.59□□□□□ -0.07
CSPG5-204ENST00000465441 H7BYZ3 331 aa14.59□□□□□ -0.07
CSPG5-204ENST00000465441 SLC17A3O00476 420 aa14.59□□□□□ -0.07
CSPG5-204ENST00000465441 LYRM1O43325 122 aa14.59□□□□□ -0.07
CSPG5-204ENST00000465441 CAMLGP49069 296 aa14.59□□□□□ -0.07
CSPG5-204ENST00000465441 BCAP31P51572 246 aa14.59□□□□□ -0.07
CSPG5-204ENST00000465441 ZNF846Q147U1 533 aa14.59□□□□□ -0.07
CSPG5-204ENST00000465441 NRARPQ7Z6K4 114 aa14.59□□□□□ -0.07
CSPG5-204ENST00000465441 ZNF575Q86XF7 245 aa14.59□□□□□ -0.07
CSPG5-204ENST00000465441 TMEM263Q8WUH6 116 aaKnown RBP14.59□□□□□ -0.07
CSPG5-204ENST00000465441 S100ZQ8WXG8 99 aa14.59□□□□□ -0.07
CSPG5-204ENST00000465441 C20orf144Q9BQM9 153 aa14.59□□□□□ -0.07
CSPG5-204ENST00000465441 PTTG2Q9NZH5 202 aa14.59□□□□□ -0.07
CSPG5-204ENST00000465441 TRAV5A0A0B4J249 113 aa14.58□□□□□ -0.08
CSPG5-204ENST00000465441 FAM25EA8MYX2 175 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms