RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 MRPL32Q9BYC8 188 aaKnown RBP3.7□□□□□ -1.82
CACNA1C-223ENST00000465278 SH3BGRL3Q9H299 93 aa3.7□□□□□ -1.82
CACNA1C-223ENST00000465278 MAP1LC3AQ9H492 121 aa3.7□□□□□ -1.82
CACNA1C-223ENST00000465278 TXNL4BQ9NX01 149 aaKnown RBP3.7□□□□□ -1.82
CACNA1C-223ENST00000465278 NDUFB11Q9NX14 153 aa3.7□□□□□ -1.82
CACNA1C-223ENST00000465278 TVP23BQ9NYZ1 205 aa3.7□□□□□ -1.82
CACNA1C-223ENST00000465278 ANXA10Q9UJ72 324 aa3.7□□□□□ -1.82
CACNA1C-223ENST00000465278 FZR1Q9UM11 496 aa3.7□□□□□ -1.82
CACNA1C-223ENST00000465278 TRAV27A0A087WT01 109 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 TMED7-TICAM2A0A0A6YYA0 188 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 IRGMA1A4Y4 181 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 TMEM235A6NFC5 223 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 C11orf98E9PRG8 122 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 H7C1C5 153 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 ZNF593O00488 134 aaPredicted RBP3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 TAAR5O14804 337 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 CDRT1O95170 752 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 SLC2A10O95528 541 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 HLA-DRB1P01911 266 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 TRGC2P03986 189 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 GAPDHP04406 335 aaKnown RBP3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 SCTP09683 121 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 LIMS3P0CW19 117 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 LIMS4P0CW20 117 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 RBMY1CP0DJD4 496 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 CCL3P10147 92 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 PRB4P10163 310 aaPredicted RBP3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 G6PCP35575 357 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 ZNF93P35789 620 aaPredicted RBP3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 SSR4P51571 173 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 SLC25A1P53007 311 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 DSCR4P56555 118 aaPredicted RBP3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 SEC11AP67812 179 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 PSG4Q00888 419 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 EWSR1Q01844 656 aaKnown RBP eCLIP3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 ZNF85Q03923 595 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 SRYQ05066 204 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 PMCHL1Q16048 86 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 BATFQ16520 125 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 LRRC75BQ2VPJ9 315 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 ZNF684Q5T5D7 378 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 LINC00612Q8N6U2 182 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 OR52I1Q8NGK6 324 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 OR2T27Q8NH04 317 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 OR8S1Q8NH09 359 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 RFESDQ8TAC1 157 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 ZPLD1Q8TCW7 415 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 FRZBQ92765 325 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 TMEM70Q9BUB7 260 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 SLC35B3Q9H1N7 401 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 TMEM106BQ9NUM4 274 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 SIGLEC8Q9NYZ4 499 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 RPUSD1Q9UJJ7 312 aaKnown RBP3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 TP53TG1Q9Y2A0 90 aa3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 DYNC1H1Q14204 4646 aaKnown RBP3.69□□□□□ -1.82
CACNA1C-223ENST00000465278 MED12LQ86YW9 2145 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 TET2Q6N021 2002 aaPredicted RBP3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 IGHV3OR16-12A0A075B7B8 117 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 A0A1B0GV50 99 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 OR4C46A6NHA9 309 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 DEFB108AA8MXU0 73 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 F5H5K5 113 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 K7EP34 96 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 M0R129 80 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 TAX1BP3O14907 124 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 UBL3O95164 117 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 NDUFA7O95182 113 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 PTHP01270 115 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 ZNF728P0DKX0 622 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 RPL12P30050 165 aaKnown RBP3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 TSPOP30536 169 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 HRH1P35367 487 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 TAS2R46P59540 309 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 YPEL3P61236 119 aaPredicted RBP3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 RPL18Q07020 188 aaKnown RBP3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 FOXF1Q12946 379 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 C1DQ13901 141 aaKnown RBP3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 ENDOGQ14249 297 aaKnown RBP3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 Q1RN00 199 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 RPEL1Q2QD12 228 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 LCE3CQ5T5A8 94 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 C1orf140Q5VVS0 124 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 UNQ5815/PRO19632Q6UWF5 114 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 GLIPR1L1Q6UWM5 242 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 TMEM91Q6ZNR0 172 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 C1orf174Q8IYL3 243 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 TOMM5Q8N4H5 51 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 MDS2Q8NDY4 140 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 KLHL30-AS1Q8NEE0 82 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 OR51A4Q8NGJ6 313 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 OR2K2Q8NGT1 345 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 ATP6V0E2Q8NHE4 81 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 ZNF563Q8TA94 476 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 THEM6Q8WUY1 208 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 BAALCQ8WXS3 180 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 OR5P3Q8WZ94 311 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 SMIM3Q9BZL3 60 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 CHIAQ9BZP6 476 aa3.68□□□□□ -1.82
CACNA1C-223ENST00000465278 HES4Q9HCC6 221 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms