RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 HTN3P15516 51 aa10.17□□□□□ -0.78
SNRNP40-203ENST00000463988 UBE2DNLQ8IWF7 75 aa10.17□□□□□ -0.78
SNRNP40-203ENST00000463988 TMEM256Q8N2U0 113 aa10.17□□□□□ -0.78
SNRNP40-203ENST00000463988 LRRC20Q8TCA0 184 aa10.17□□□□□ -0.78
SNRNP40-203ENST00000463988 A0A1B0GVY2 172 aa10.16□□□□□ -0.78
SNRNP40-203ENST00000463988 ZNF705GA8MUZ8 300 aaPredicted RBP10.16□□□□□ -0.78
SNRNP40-203ENST00000463988 RTL8CO15255 209 aa10.16□□□□□ -0.78
SNRNP40-203ENST00000463988 HIST1H1AQ02539 215 aaPredicted RBP10.16□□□□□ -0.78
SNRNP40-203ENST00000463988 SLC38A11Q08AI6 406 aa10.16□□□□□ -0.78
SNRNP40-203ENST00000463988 ARL16Q0P5N6 197 aa10.16□□□□□ -0.78
SNRNP40-203ENST00000463988 TMEM88Q6PEY1 159 aa10.16□□□□□ -0.78
SNRNP40-203ENST00000463988 LCN15Q6UWW0 184 aa10.16□□□□□ -0.78
SNRNP40-203ENST00000463988 Q6ZR54 194 aa10.16□□□□□ -0.78
SNRNP40-203ENST00000463988 BAP18Q8IXM2 172 aa10.16□□□□□ -0.78
SNRNP40-203ENST00000463988 C15orf53Q8NAA6 179 aa10.16□□□□□ -0.78
SNRNP40-203ENST00000463988 AGPAT2O15120 278 aa10.15□□□□□ -0.78
SNRNP40-203ENST00000463988 PLA2G10O15496 165 aa10.15□□□□□ -0.78
SNRNP40-203ENST00000463988 FAM3BP58499 235 aaPredicted RBP10.15□□□□□ -0.78
SNRNP40-203ENST00000463988 TAS2R60P59551 318 aa10.15□□□□□ -0.78
SNRNP40-203ENST00000463988 RHOBP62745 196 aa10.15□□□□□ -0.78
SNRNP40-203ENST00000463988 ZNF846Q147U1 533 aa10.15□□□□□ -0.78
SNRNP40-203ENST00000463988 LINC00305Q7Z4B0 112 aa10.15□□□□□ -0.78
SNRNP40-203ENST00000463988 BPIFA4PQ86YQ2 179 aa10.15□□□□□ -0.78
SNRNP40-203ENST00000463988 RPUSD4Q96CM3 377 aaKnown RBP10.15□□□□□ -0.78
SNRNP40-203ENST00000463988 SLC50A1Q9BRV3 221 aa10.15□□□□□ -0.78
SNRNP40-203ENST00000463988 C20orf85Q9H1P6 137 aa10.15□□□□□ -0.78
SNRNP40-203ENST00000463988 PPP1R14DQ9NXH3 145 aa10.15□□□□□ -0.78
SNRNP40-203ENST00000463988 TRAV12-2A0A075B6T6 113 aa10.14□□□□□ -0.79
SNRNP40-203ENST00000463988 PLAC8L1A1L4L8 177 aa10.14□□□□□ -0.79
SNRNP40-203ENST00000463988 PRSS29PA6NIE9 313 aa10.14□□□□□ -0.79
SNRNP40-203ENST00000463988 M0R2N4 97 aa10.14□□□□□ -0.79
SNRNP40-203ENST00000463988 LYRM1O43325 122 aa10.14□□□□□ -0.79
SNRNP40-203ENST00000463988 LINC01587Q99440 93 aa10.14□□□□□ -0.79
SNRNP40-203ENST00000463988 ZNF331Q9NQX6 463 aaPredicted RBP10.14□□□□□ -0.79
SNRNP40-203ENST00000463988 L7N2F9 121 aa10.13□□□□□ -0.79
SNRNP40-203ENST00000463988 COX7A2P2O60397 106 aa10.13□□□□□ -0.79
SNRNP40-203ENST00000463988 TCRBP04435 133 aa10.13□□□□□ -0.79
SNRNP40-203ENST00000463988 PRM2P04554 102 aa10.13□□□□□ -0.79
SNRNP40-203ENST00000463988 AZU1P20160 251 aa10.13□□□□□ -0.79
SNRNP40-203ENST00000463988 CDKN1BP46527 198 aa10.13□□□□□ -0.79
SNRNP40-203ENST00000463988 VAMP2P63027 116 aa10.13□□□□□ -0.79
SNRNP40-203ENST00000463988 RAB31Q13636 194 aa10.13□□□□□ -0.79
SNRNP40-203ENST00000463988 ZNF493Q6ZR52 646 aa10.13□□□□□ -0.79
SNRNP40-203ENST00000463988 ZNF431Q8TF32 576 aaPredicted RBP10.13□□□□□ -0.79
SNRNP40-203ENST00000463988 TMEM37Q8WXS4 190 aa10.13□□□□□ -0.79
SNRNP40-203ENST00000463988 MGST2Q99735 147 aa10.13□□□□□ -0.79
SNRNP40-203ENST00000463988 C20orf144Q9BQM9 153 aa10.13□□□□□ -0.79
SNRNP40-203ENST00000463988 NDUFA13Q9P0J0 144 aa10.13□□□□□ -0.79
SNRNP40-203ENST00000463988 DEFB130BP0DP73 79 aa10.12□□□□□ -0.79
SNRNP40-203ENST00000463988 DEFB130AP0DP74 79 aa10.12□□□□□ -0.79
SNRNP40-203ENST00000463988 SOHLH1Q5JUK2 328 aa10.12□□□□□ -0.79
SNRNP40-203ENST00000463988 C10orf113Q5VZT2 155 aa10.12□□□□□ -0.79
SNRNP40-203ENST00000463988 C16orf74Q96GX8 76 aa10.12□□□□□ -0.79
SNRNP40-203ENST00000463988 KRTAP17-1Q9BYP8 105 aa10.12□□□□□ -0.79
SNRNP40-203ENST00000463988 DNAJC4Q9NNZ3 241 aa10.12□□□□□ -0.79
SNRNP40-203ENST00000463988 PXMP4Q9Y6I8 212 aa10.12□□□□□ -0.79
SNRNP40-203ENST00000463988 DNAH11Q96DT5 4516 aa10.12□□□□□ -0.79
SNRNP40-203ENST00000463988 IGLV2-18A0A075B6J9 118 aa10.11□□□□□ -0.79
SNRNP40-203ENST00000463988 CBY3A6NI87 242 aa10.11□□□□□ -0.79
SNRNP40-203ENST00000463988 H7BYZ3 331 aa10.11□□□□□ -0.79
SNRNP40-203ENST00000463988 CCSO14618 274 aa10.11□□□□□ -0.79
SNRNP40-203ENST00000463988 ATP5G1P05496 136 aa10.11□□□□□ -0.79
SNRNP40-203ENST00000463988 IGLC2P0DOY2 106 aa10.11□□□□□ -0.79
SNRNP40-203ENST00000463988 ATP5G3P48201 142 aa10.11□□□□□ -0.79
SNRNP40-203ENST00000463988 CAMLGP49069 296 aa10.11□□□□□ -0.79
SNRNP40-203ENST00000463988 OPCMLQ14982 345 aa10.11□□□□□ -0.79
SNRNP40-203ENST00000463988 GUK1Q16774 197 aa10.11□□□□□ -0.79
SNRNP40-203ENST00000463988 Q6ZRG5 221 aa10.11□□□□□ -0.79
SNRNP40-203ENST00000463988 C2orf50Q96LR7 162 aa10.11□□□□□ -0.79
SNRNP40-203ENST00000463988 C11orf1Q9H5F2 150 aa10.11□□□□□ -0.79
SNRNP40-203ENST00000463988 LSM5Q9Y4Y9 91 aaKnown RBP10.11□□□□□ -0.79
SNRNP40-203ENST00000463988 TIMM8BQ9Y5J9 83 aaPredicted RBP10.11□□□□□ -0.79
SNRNP40-203ENST00000463988 PKHD1P08F94 4074 aa10.1□□□□□ -0.79
SNRNP40-203ENST00000463988 NACAE9PAV3 2078 aa10.1□□□□□ -0.79
SNRNP40-203ENST00000463988 C5orf51A6NDU8 294 aa10.1□□□□□ -0.79
SNRNP40-203ENST00000463988 FAM25EA8MYX2 175 aa10.1□□□□□ -0.79
SNRNP40-203ENST00000463988 PVALBP20472 110 aaPredicted RBP10.1□□□□□ -0.79
SNRNP40-203ENST00000463988 BCAP31P51572 246 aa10.1□□□□□ -0.79
SNRNP40-203ENST00000463988 CAV2P51636 162 aa10.1□□□□□ -0.79
SNRNP40-203ENST00000463988 VWC2Q2TAL6 325 aa10.1□□□□□ -0.79
SNRNP40-203ENST00000463988 MORN5Q5VZ52 161 aa10.1□□□□□ -0.79
SNRNP40-203ENST00000463988 NRARPQ7Z6K4 114 aa10.1□□□□□ -0.79
SNRNP40-203ENST00000463988 C12orf45Q8N5I9 185 aaPredicted RBP10.1□□□□□ -0.79
SNRNP40-203ENST00000463988 OR1L4Q8NGR5 311 aa10.1□□□□□ -0.79
SNRNP40-203ENST00000463988 OR10J6PQ8NGY7 276 aa10.1□□□□□ -0.79
SNRNP40-203ENST00000463988 RNASE8Q8TDE3 154 aaKnown RBP10.1□□□□□ -0.79
SNRNP40-203ENST00000463988 TMEM263Q8WUH6 116 aaKnown RBP10.1□□□□□ -0.79
SNRNP40-203ENST00000463988 SAT2Q96F10 170 aaPredicted RBP10.1□□□□□ -0.79
SNRNP40-203ENST00000463988 NUDT15Q9NV35 164 aa10.1□□□□□ -0.79
SNRNP40-203ENST00000463988 UQCC1Q9NVA1 299 aa10.1□□□□□ -0.79
SNRNP40-203ENST00000463988 WDR83OSQ9Y284 106 aa10.1□□□□□ -0.79
SNRNP40-203ENST00000463988 PKD1P98161 4303 aa10.1□□□□□ -0.79
SNRNP40-203ENST00000463988 TRAV6A0A075B6T7 132 aa10.09□□□□□ -0.79
SNRNP40-203ENST00000463988 F5H768 121 aa10.09□□□□□ -0.79
SNRNP40-203ENST00000463988 SLC17A3O00476 420 aa10.09□□□□□ -0.79
SNRNP40-203ENST00000463988 CST7O76096 145 aa10.09□□□□□ -0.79
SNRNP40-203ENST00000463988 MED14OSP0DP75 135 aa10.09□□□□□ -0.79
SNRNP40-203ENST00000463988 S100A11P31949 105 aa10.09□□□□□ -0.79
SNRNP40-203ENST00000463988 RPL29P47914 159 aaKnown RBP10.09□□□□□ -0.79
SNRNP40-203ENST00000463988 FCN2Q15485 313 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms