RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SPATA31B1PQ5VZV4 182 aa12.88□□□□□ -0.35
VPS52-214ENST00000463486 FAM167A-AS1Q96KT0 104 aa12.88□□□□□ -0.35
VPS52-214ENST00000463486 RPRMQ9NS64 109 aa12.88□□□□□ -0.35
VPS52-214ENST00000463486 RNF222A6NCQ9 220 aa12.87□□□□□ -0.35
VPS52-214ENST00000463486 ZNF709Q8N972 641 aa12.87□□□□□ -0.35
VPS52-214ENST00000463486 HRH4Q9H3N8 390 aa12.87□□□□□ -0.35
VPS52-214ENST00000463486 ZNF331Q9NQX6 463 aaPredicted RBP12.87□□□□□ -0.35
VPS52-214ENST00000463486 TMEM14CQ9P0S9 112 aa12.87□□□□□ -0.35
VPS52-214ENST00000463486 SACSQ9NZJ4 4579 aa12.86□□□□□ -0.35
VPS52-214ENST00000463486 H3BTX0 84 aa12.86□□□□□ -0.35
VPS52-214ENST00000463486 SLC17A3O00476 420 aa12.86□□□□□ -0.35
VPS52-214ENST00000463486 CXCL2P19875 107 aa12.86□□□□□ -0.35
VPS52-214ENST00000463486 PSG3Q16557 428 aa12.86□□□□□ -0.35
VPS52-214ENST00000463486 TMEM41BQ5BJD5 291 aa12.86□□□□□ -0.35
VPS52-214ENST00000463486 FAM78BQ5VT40 261 aa12.86□□□□□ -0.35
VPS52-214ENST00000463486 AMTNQ6UX39 209 aa12.86□□□□□ -0.35
VPS52-214ENST00000463486 OR2T35Q8NGX2 323 aa12.86□□□□□ -0.35
VPS52-214ENST00000463486 ZNF586Q9NXT0 402 aa12.86□□□□□ -0.35
VPS52-214ENST00000463486 TNFSF18Q9UNG2 199 aa12.86□□□□□ -0.35
VPS52-214ENST00000463486 C3orf84H3BNL1 204 aa12.85□□□□□ -0.35
VPS52-214ENST00000463486 LCN15Q6UWW0 184 aa12.85□□□□□ -0.35
VPS52-214ENST00000463486 MIR17HGQ75NE6 70 aa12.85□□□□□ -0.35
VPS52-214ENST00000463486 OR11H2Q8NH07 326 aa12.85□□□□□ -0.35
VPS52-214ENST00000463486 RARRES2Q99969 163 aa12.85□□□□□ -0.35
VPS52-214ENST00000463486 SLC25A2Q9BXI2 301 aa12.85□□□□□ -0.35
VPS52-214ENST00000463486 CLEC5AQ9NY25 188 aa12.85□□□□□ -0.35
VPS52-214ENST00000463486 A0A0J9YWU9 116 aa12.84□□□□□ -0.35
VPS52-214ENST00000463486 ZNF705EA8MWA4 302 aaPredicted RBP12.84□□□□□ -0.35
VPS52-214ENST00000463486 C17orf112F2Z3M2 114 aa12.84□□□□□ -0.35
VPS52-214ENST00000463486 NDUFB4O95168 129 aa12.84□□□□□ -0.35
VPS52-214ENST00000463486 IFNA5P01569 189 aa12.84□□□□□ -0.35
VPS52-214ENST00000463486 IGKV3-20P01619 116 aa12.84□□□□□ -0.35
VPS52-214ENST00000463486 EBLN2Q6P2I7 272 aa12.84□□□□□ -0.35
VPS52-214ENST00000463486 SLC35B3Q9H1N7 401 aa12.84□□□□□ -0.35
VPS52-214ENST00000463486 KCNIP2Q9NS61 270 aa12.84□□□□□ -0.35
VPS52-214ENST00000463486 X6R8D5 127 aa12.84□□□□□ -0.35
VPS52-214ENST00000463486 RYR3Q15413 4870 aa12.84□□□□□ -0.35
VPS52-214ENST00000463486 DNAH1Q9P2D7 4330 aa12.83□□□□□ -0.36
VPS52-214ENST00000463486 TRBV19A0A075B6N1 114 aa12.83□□□□□ -0.36
VPS52-214ENST00000463486 ZNF705DP0CH99 300 aaPredicted RBP12.83□□□□□ -0.36
VPS52-214ENST00000463486 ZNF705BP0CI00 300 aaPredicted RBP12.83□□□□□ -0.36
VPS52-214ENST00000463486 PYYP10082 97 aa12.83□□□□□ -0.36
VPS52-214ENST00000463486 CASC10Q5T4H9 136 aa12.83□□□□□ -0.36
VPS52-214ENST00000463486 SCGB1C1Q8TD33 95 aa12.83□□□□□ -0.36
VPS52-214ENST00000463486 XCL2Q9UBD3 114 aa12.83□□□□□ -0.36
VPS52-214ENST00000463486 LYSTQ99698 3801 aa12.82□□□□□ -0.36
VPS52-214ENST00000463486 ZNF705FA8MVS1 300 aaPredicted RBP12.82□□□□□ -0.36
VPS52-214ENST00000463486 PRAC2D3DTV9 90 aa12.82□□□□□ -0.36
VPS52-214ENST00000463486 PRB4P10163 310 aaPredicted RBP12.82□□□□□ -0.36
VPS52-214ENST00000463486 HIST1H1EP10412 219 aaKnown RBP12.82□□□□□ -0.36
VPS52-214ENST00000463486 CNN1P51911 297 aaKnown RBP12.82□□□□□ -0.36
VPS52-214ENST00000463486 GUK1Q16774 197 aa12.82□□□□□ -0.36
VPS52-214ENST00000463486 FFAR4Q5NUL3 377 aa12.82□□□□□ -0.36
VPS52-214ENST00000463486 OR4B1Q8NGF8 309 aa12.82□□□□□ -0.36
VPS52-214ENST00000463486 ZNF503Q96F45 646 aa12.82□□□□□ -0.36
VPS52-214ENST00000463486 SLC50A1Q9BRV3 221 aa12.82□□□□□ -0.36
VPS52-214ENST00000463486 FUT9Q9Y231 359 aa12.82□□□□□ -0.36
VPS52-214ENST00000463486 TIMM9Q9Y5J7 89 aa12.82□□□□□ -0.36
VPS52-214ENST00000463486 FXYD6-FXYD2A0A087WZ82 144 aa12.81□□□□□ -0.36
VPS52-214ENST00000463486 SMLR1H3BR10 107 aa12.81□□□□□ -0.36
VPS52-214ENST00000463486 ZNF253O75346 499 aa12.81□□□□□ -0.36
VPS52-214ENST00000463486 FXYD7P58549 80 aa12.81□□□□□ -0.36
VPS52-214ENST00000463486 NUTF2P61970 127 aaKnown RBP12.81□□□□□ -0.36
VPS52-214ENST00000463486 PSG9Q00887 426 aa12.81□□□□□ -0.36
VPS52-214ENST00000463486 ZNF705AQ6ZN79 300 aaPredicted RBP12.81□□□□□ -0.36
VPS52-214ENST00000463486 Q8NAQ8 132 aa12.81□□□□□ -0.36
VPS52-214ENST00000463486 ZNF738Q8NE65 137 aa12.81□□□□□ -0.36
VPS52-214ENST00000463486 OR8A1Q8NGG7 326 aa12.81□□□□□ -0.36
VPS52-214ENST00000463486 LRRC20Q8TCA0 184 aa12.81□□□□□ -0.36
VPS52-214ENST00000463486 RPUSD4Q96CM3 377 aaKnown RBP12.81□□□□□ -0.36
VPS52-214ENST00000463486 MRPL32Q9BYC8 188 aaKnown RBP12.81□□□□□ -0.36
VPS52-214ENST00000463486 INO80EQ8NBZ0 244 aaPredicted RBP12.8□□□□□ -0.36
VPS52-214ENST00000463486 IL17DQ8TAD2 202 aa12.8□□□□□ -0.36
VPS52-214ENST00000463486 FXYD5Q96DB9 178 aa12.8□□□□□ -0.36
VPS52-214ENST00000463486 C1QTNF4Q9BXJ3 329 aa12.8□□□□□ -0.36
VPS52-214ENST00000463486 C11orf68Q9H3H3 251 aaKnown RBP12.8□□□□□ -0.36
VPS52-214ENST00000463486 CRXO43186 299 aaPredicted RBP12.79□□□□□ -0.36
VPS52-214ENST00000463486 DUSP14O95147 198 aaKnown RBP12.79□□□□□ -0.36
VPS52-214ENST00000463486 RBMY1A1P0DJD3 496 aaKnown RBP12.79□□□□□ -0.36
VPS52-214ENST00000463486 RBMY1CP0DJD4 496 aa12.79□□□□□ -0.36
VPS52-214ENST00000463486 PDE6HQ13956 83 aa12.79□□□□□ -0.36
VPS52-214ENST00000463486 RBMY1FQ15415 496 aaKnown RBP12.79□□□□□ -0.36
VPS52-214ENST00000463486 OR11H4Q8NGC9 324 aa12.79□□□□□ -0.36
VPS52-214ENST00000463486 OR2G3Q8NGZ4 309 aa12.79□□□□□ -0.36
VPS52-214ENST00000463486 EIF3GO75821 320 aaKnown RBP eCLIP12.78□□□□□ -0.36
VPS52-214ENST00000463486 ATP6V0CP27449 155 aa12.78□□□□□ -0.36
VPS52-214ENST00000463486 RAB2AP61019 212 aa12.78□□□□□ -0.36
VPS52-214ENST00000463486 ZNF266Q14584 549 aa12.78□□□□□ -0.36
VPS52-214ENST00000463486 RPL7L1Q6DKI1 246 aaKnown RBP12.78□□□□□ -0.36
VPS52-214ENST00000463486 ZFAND6Q6FIF0 208 aa12.78□□□□□ -0.36
VPS52-214ENST00000463486 Q6ZNX1 250 aa12.78□□□□□ -0.36
VPS52-214ENST00000463486 C1orf158Q8N1D5 194 aa12.78□□□□□ -0.36
VPS52-214ENST00000463486 HSD17B11Q8NBQ5 300 aa12.78□□□□□ -0.36
VPS52-214ENST00000463486 PSMG3Q9BT73 122 aaPredicted RBP12.78□□□□□ -0.36
VPS52-214ENST00000463486 MFFQ9GZY8 342 aa12.78□□□□□ -0.36
VPS52-214ENST00000463486 OR51M1Q9H341 326 aa12.78□□□□□ -0.36
VPS52-214ENST00000463486 RYR2Q92736 4967 aa12.78□□□□□ -0.36
VPS52-214ENST00000463486 IGHV4-28A0A0C4DH34 117 aa12.77□□□□□ -0.37
VPS52-214ENST00000463486 DEFB4AO15263 64 aa12.77□□□□□ -0.37
VPS52-214ENST00000463486 NBEAP1P0C6P0 100 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms