RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 CXorf65A6NEN9 183 aa13.66□□□□□ -0.22
COL9A3-203ENST00000462700 A8MTW9 85 aa13.66□□□□□ -0.22
COL9A3-203ENST00000462700 DEFB4AO15263 64 aa13.66□□□□□ -0.22
COL9A3-203ENST00000462700 MIFP14174 115 aa13.66□□□□□ -0.22
COL9A3-203ENST00000462700 HLA-DMBP28068 263 aa13.66□□□□□ -0.22
COL9A3-203ENST00000462700 FXYD7P58549 80 aa13.66□□□□□ -0.22
COL9A3-203ENST00000462700 PSG9Q00887 426 aa13.66□□□□□ -0.22
COL9A3-203ENST00000462700 LCN15Q6UWW0 184 aa13.66□□□□□ -0.22
COL9A3-203ENST00000462700 ZNF738Q8NE65 137 aa13.66□□□□□ -0.22
COL9A3-203ENST00000462700 LRRC20Q8TCA0 184 aa13.66□□□□□ -0.22
COL9A3-203ENST00000462700 WDR61Q9GZS3 305 aaKnown RBP13.66□□□□□ -0.22
COL9A3-203ENST00000462700 SLC35B3Q9H1N7 401 aa13.66□□□□□ -0.22
COL9A3-203ENST00000462700 HSPB11Q9Y547 144 aa13.66□□□□□ -0.22
COL9A3-203ENST00000462700 TRAV5A0A0B4J249 113 aa13.65□□□□□ -0.22
COL9A3-203ENST00000462700 SNRPCP09234 159 aaKnown RBP13.65□□□□□ -0.22
COL9A3-203ENST00000462700 IGLC2P0DOY2 106 aa13.65□□□□□ -0.22
COL9A3-203ENST00000462700 RPL12P30050 165 aaKnown RBP13.65□□□□□ -0.22
COL9A3-203ENST00000462700 FCN2Q15485 313 aa13.65□□□□□ -0.22
COL9A3-203ENST00000462700 ATP5SQ99766 215 aa13.65□□□□□ -0.22
COL9A3-203ENST00000462700 SLC50A1Q9BRV3 221 aa13.65□□□□□ -0.22
COL9A3-203ENST00000462700 MED28Q9H204 178 aa13.65□□□□□ -0.22
COL9A3-203ENST00000462700 DUSP14O95147 198 aaKnown RBP13.64□□□□□ -0.23
COL9A3-203ENST00000462700 RBMY1A1P0DJD3 496 aaKnown RBP13.64□□□□□ -0.23
COL9A3-203ENST00000462700 RBMY1CP0DJD4 496 aa13.64□□□□□ -0.23
COL9A3-203ENST00000462700 CNN1P51911 297 aaKnown RBP13.64□□□□□ -0.23
COL9A3-203ENST00000462700 RBMY1FQ15415 496 aaKnown RBP13.64□□□□□ -0.23
COL9A3-203ENST00000462700 PSG3Q16557 428 aa13.64□□□□□ -0.23
COL9A3-203ENST00000462700 OR11H7Q8NGC8 314 aa13.64□□□□□ -0.23
COL9A3-203ENST00000462700 ZNF331Q9NQX6 463 aaPredicted RBP13.64□□□□□ -0.23
COL9A3-203ENST00000462700 NUPR2A6NF83 97 aa13.63□□□□□ -0.23
COL9A3-203ENST00000462700 ZNF705DP0CH99 300 aaPredicted RBP13.63□□□□□ -0.23
COL9A3-203ENST00000462700 ZNF705BP0CI00 300 aaPredicted RBP13.63□□□□□ -0.23
COL9A3-203ENST00000462700 RGS21Q2M5E4 152 aa13.63□□□□□ -0.23
COL9A3-203ENST00000462700 GCSAMLQ5JQS6 135 aa13.63□□□□□ -0.23
COL9A3-203ENST00000462700 AMTNQ6UX39 209 aa13.63□□□□□ -0.23
COL9A3-203ENST00000462700 ZNF705AQ6ZN79 300 aaPredicted RBP13.63□□□□□ -0.23
COL9A3-203ENST00000462700 C11orf45Q8TAV5 145 aa13.63□□□□□ -0.23
COL9A3-203ENST00000462700 MFFQ9GZY8 342 aa13.63□□□□□ -0.23
COL9A3-203ENST00000462700 HRH4Q9H3N8 390 aa13.63□□□□□ -0.23
COL9A3-203ENST00000462700 KCNIP2Q9NS61 270 aa13.63□□□□□ -0.23
COL9A3-203ENST00000462700 LCE6AA0A183 80 aa13.62□□□□□ -0.23
COL9A3-203ENST00000462700 H3BQ15 152 aa13.62□□□□□ -0.23
COL9A3-203ENST00000462700 H3BTX0 84 aa13.62□□□□□ -0.23
COL9A3-203ENST00000462700 SLC17A3O00476 420 aa13.62□□□□□ -0.23
COL9A3-203ENST00000462700 SMIM3Q9BZL3 60 aa13.62□□□□□ -0.23
COL9A3-203ENST00000462700 ZNF705FA8MVS1 300 aaPredicted RBP13.61□□□□□ -0.23
COL9A3-203ENST00000462700 C17orf112F2Z3M2 114 aa13.61□□□□□ -0.23
COL9A3-203ENST00000462700 NANOS2P60321 138 aaKnown RBP13.61□□□□□ -0.23
COL9A3-203ENST00000462700 GUK1Q16774 197 aa13.61□□□□□ -0.23
COL9A3-203ENST00000462700 CEMP1Q6PRD7 247 aaPredicted RBP13.61□□□□□ -0.23
COL9A3-203ENST00000462700 SAT2Q96F10 170 aaPredicted RBP13.61□□□□□ -0.23
COL9A3-203ENST00000462700 RYR2Q92736 4967 aa13.6□□□□□ -0.23
COL9A3-203ENST00000462700 PLECQ15149 4684 aaKnown RBP13.6□□□□□ -0.23
COL9A3-203ENST00000462700 HIST1H1AQ02539 215 aaPredicted RBP13.6□□□□□ -0.23
COL9A3-203ENST00000462700 OR8A1Q8NGG7 326 aa13.6□□□□□ -0.23
COL9A3-203ENST00000462700 PHLDA1Q8WV24 401 aaPredicted RBP13.6□□□□□ -0.23
COL9A3-203ENST00000462700 RPUSD4Q96CM3 377 aaKnown RBP13.6□□□□□ -0.23
COL9A3-203ENST00000462700 NEU1Q99519 415 aa13.6□□□□□ -0.23
COL9A3-203ENST00000462700 ZNF586Q9NXT0 402 aa13.6□□□□□ -0.23
COL9A3-203ENST00000462700 TMEM14CQ9P0S9 112 aa13.6□□□□□ -0.23
COL9A3-203ENST00000462700 IGHV3OR16-12A0A075B7B8 117 aa13.59□□□□□ -0.23
COL9A3-203ENST00000462700 IFNA5P01569 189 aa13.59□□□□□ -0.23
COL9A3-203ENST00000462700 AMBPP02760 352 aa13.59□□□□□ -0.23
COL9A3-203ENST00000462700 PRB4P10163 310 aaPredicted RBP13.59□□□□□ -0.23
COL9A3-203ENST00000462700 OXA1LQ15070 435 aa13.59□□□□□ -0.23
COL9A3-203ENST00000462700 LYSTQ99698 3801 aa13.59□□□□□ -0.23
COL9A3-203ENST00000462700 M0R2Z0 102 aa13.58□□□□□ -0.24
COL9A3-203ENST00000462700 ZNF253O75346 499 aa13.58□□□□□ -0.24
COL9A3-203ENST00000462700 GIPP09681 153 aaPredicted RBP13.58□□□□□ -0.24
COL9A3-203ENST00000462700 SPINK13Q1W4C9 94 aa13.58□□□□□ -0.24
COL9A3-203ENST00000462700 MIR17HGQ75NE6 70 aa13.58□□□□□ -0.24
COL9A3-203ENST00000462700 C1orf158Q8N1D5 194 aa13.58□□□□□ -0.24
COL9A3-203ENST00000462700 SCGB1C1Q8TD33 95 aa13.58□□□□□ -0.24
COL9A3-203ENST00000462700 ASB13Q8WXK3 278 aa13.58□□□□□ -0.24
COL9A3-203ENST00000462700 IGF2BP2-AS1Q96M15 143 aa13.58□□□□□ -0.24
COL9A3-203ENST00000462700 SLC25A2Q9BXI2 301 aa13.58□□□□□ -0.24
COL9A3-203ENST00000462700 PARD6GQ9BYG4 376 aaPredicted RBP13.58□□□□□ -0.24
COL9A3-203ENST00000462700 WFDC1Q9HC57 220 aa13.58□□□□□ -0.24
COL9A3-203ENST00000462700 GOLT1BQ9Y3E0 138 aa13.58□□□□□ -0.24
COL9A3-203ENST00000462700 TENM2Q9NT68 2774 aa13.58□□□□□ -0.24
COL9A3-203ENST00000462700 TRBV19A0A075B6N1 114 aa13.57□□□□□ -0.24
COL9A3-203ENST00000462700 SMIM9A6NGZ8 99 aa13.57□□□□□ -0.24
COL9A3-203ENST00000462700 BOLA2-SMG1P6H3BVE0 249 aa13.57□□□□□ -0.24
COL9A3-203ENST00000462700 JTBO76095 146 aa13.57□□□□□ -0.24
COL9A3-203ENST00000462700 PYYP10082 97 aa13.57□□□□□ -0.24
COL9A3-203ENST00000462700 RHOBP62745 196 aa13.57□□□□□ -0.24
COL9A3-203ENST00000462700 MRPL32Q9BYC8 188 aaKnown RBP13.57□□□□□ -0.24
COL9A3-203ENST00000462700 KLK5Q9Y337 293 aaPredicted RBP13.57□□□□□ -0.24
COL9A3-203ENST00000462700 CRXO43186 299 aaPredicted RBP13.56□□□□□ -0.24
COL9A3-203ENST00000462700 HIST1H1EP10412 219 aaKnown RBP13.56□□□□□ -0.24
COL9A3-203ENST00000462700 FAM167A-AS1Q96KT0 104 aa13.56□□□□□ -0.24
COL9A3-203ENST00000462700 PRAC2D3DTV9 90 aa13.55□□□□□ -0.24
COL9A3-203ENST00000462700 INSP01308 110 aa13.55□□□□□ -0.24
COL9A3-203ENST00000462700 PDE6HQ13956 83 aa13.55□□□□□ -0.24
COL9A3-203ENST00000462700 Q5BKY6 102 aa13.55□□□□□ -0.24
COL9A3-203ENST00000462700 FFAR4Q5NUL3 377 aa13.55□□□□□ -0.24
COL9A3-203ENST00000462700 BAP18Q8IXM2 172 aa13.55□□□□□ -0.24
COL9A3-203ENST00000462700 AQP10Q96PS8 301 aa13.55□□□□□ -0.24
COL9A3-203ENST00000462700 CELA1Q9UNI1 258 aa13.55□□□□□ -0.24
COL9A3-203ENST00000462700 FUT9Q9Y231 359 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms